RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 MYCNP04198 464 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-201ENST00000261007 SLURP2P0DP57 97 aa11.75□□□□□ -0.53
CHRNA1-201ENST00000261007 ECHS1P30084 290 aa11.75□□□□□ -0.53
CHRNA1-201ENST00000261007 ZNF76P36508 570 aa11.75□□□□□ -0.53
CHRNA1-201ENST00000261007 RIPK1Q13546 671 aa11.75□□□□□ -0.53
CHRNA1-201ENST00000261007 BYSLQ13895 437 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-201ENST00000261007 SHROOM1Q2M3G4 852 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-201ENST00000261007 USH1GQ495M9 461 aa11.75□□□□□ -0.53
CHRNA1-201ENST00000261007 CACNA2D4Q7Z3S7 1137 aa11.75□□□□□ -0.53
CHRNA1-201ENST00000261007 GPBP1Q86WP2 473 aa11.75□□□□□ -0.53
CHRNA1-201ENST00000261007 ANKRD13CQ8N6S4 541 aa11.75□□□□□ -0.53
CHRNA1-201ENST00000261007 SCFD2Q8WU76 684 aa11.75□□□□□ -0.53
CHRNA1-201ENST00000261007 RAPGEF5Q92565 580 aa11.75□□□□□ -0.53
CHRNA1-201ENST00000261007 POLR3CQ9BUI4 534 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-201ENST00000261007 RANBP17Q9H2T7 1088 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-201ENST00000261007 CEP72Q9P209 647 aa11.75□□□□□ -0.53
CHRNA1-201ENST00000261007 FEM1BQ9UK73 627 aa11.75□□□□□ -0.53
CHRNA1-201ENST00000261007 PNMA2Q9UL42 364 aa11.75□□□□□ -0.53
CHRNA1-201ENST00000261007 CNTNAP1P78357 1384 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 RAD17O75943 681 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 KRT18P05783 430 aaKnown RBP11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 ASNSP08243 561 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 POLR2MP0CAP2 368 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 CYP11B2P19099 503 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 CTNNA1P35221 906 aaKnown RBP11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 CLNS1AP54105 237 aaKnown RBP11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 TGFB2P61812 414 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 ERVK-9P63128 1117 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 MAP3K10Q02779 954 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 SPIRE1Q08AE8 756 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 SLMAPQ14BN4 828 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 UAP1Q16222 522 aaPredicted RBP11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 ECM1Q16610 540 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 QPCTQ16769 361 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 EDRF1Q3B7T1 1238 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 ZCWPW2Q504Y3 356 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 C10orf76Q5T2E6 689 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 LRRC55Q6ZSA7 311 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 CCHCR1Q8TD31 782 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 ACTRT1Q8TDG2 376 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 TAF4BQ92750 862 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 HVCN1Q96D96 273 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 POTEB3A0JP26 581 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 CLRN2A0PK11 232 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 POTECB2RU33 542 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 CCDC188H7C350 402 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 SSBP05455 408 aaKnown RBP eCLIP11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 DRD4P21917 467 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 CAP2P40123 477 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 SLC12A3P55017 1021 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 MARSP56192 900 aaKnown RBP11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 IRX1P78414 480 aaPredicted RBP11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 HLTFQ14527 1009 aaKnown RBP eCLIP11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 SLC18A3Q16572 532 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 SFMBT2Q5VUG0 894 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 LRCH2Q5VUJ6 765 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 POTEBQ6S5H4 581 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 SAMD3Q8N6K7 520 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 SYT2Q8N9I0 419 aaPredicted RBP11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 LENG9Q96B70 501 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 RSRC1Q96IZ7 334 aaKnown RBP11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 SCLT1Q96NL6 688 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 TRIM6Q9C030 488 aaPredicted RBP11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 DEFB129Q9H1M3 183 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 POLD4Q9HCU8 107 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 TUFT1Q9NNX1 390 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 COL4A3BPQ9Y5P4 624 aa11.74□□□□□ -0.53
CHRNA1-201ENST00000261007 CCT8L1PA6NM43 557 aa11.73□□□□□ -0.53
CHRNA1-201ENST00000261007 E9PMD0 336 aa11.73□□□□□ -0.53
CHRNA1-201ENST00000261007 MED24O75448 989 aa11.73□□□□□ -0.53
CHRNA1-201ENST00000261007 ATP6V1G2O95670 118 aa11.73□□□□□ -0.53
CHRNA1-201ENST00000261007 DPEP1P16444 411 aa11.73□□□□□ -0.53
CHRNA1-201ENST00000261007 EIF3BP55884 814 aaKnown RBP11.73□□□□□ -0.53
CHRNA1-201ENST00000261007 JAG1P78504 1218 aa11.73□□□□□ -0.53
CHRNA1-201ENST00000261007 ELF3P78545 371 aaPredicted RBP11.73□□□□□ -0.53
CHRNA1-201ENST00000261007 TNFAIP1Q13829 316 aa11.73□□□□□ -0.53
CHRNA1-201ENST00000261007 RRP1BQ14684 758 aaKnown RBP11.73□□□□□ -0.53
CHRNA1-201ENST00000261007 IFI16Q16666 785 aaKnown RBP11.73□□□□□ -0.53
CHRNA1-201ENST00000261007 ODF2Q5BJF6 829 aa11.73□□□□□ -0.53
CHRNA1-201ENST00000261007 HERC4Q5GLZ8 1057 aaPredicted RBP11.73□□□□□ -0.53
CHRNA1-201ENST00000261007 CPLX4Q7Z7G2 160 aa11.73□□□□□ -0.53
CHRNA1-201ENST00000261007 ZBED3Q96IU2 234 aaPredicted RBP11.73□□□□□ -0.53
CHRNA1-201ENST00000261007 ZNF277Q9NRM2 450 aaPredicted RBP11.73□□□□□ -0.53
CHRNA1-201ENST00000261007 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.73□□□□□ -0.53
CHRNA1-201ENST00000261007 CFAP73A6NFT4 308 aa11.72□□□□□ -0.53
CHRNA1-201ENST00000261007 OPLAHO14841 1288 aa11.72□□□□□ -0.53
CHRNA1-201ENST00000261007 ASAP2O43150 1006 aa11.72□□□□□ -0.53
CHRNA1-201ENST00000261007 FTCDO95954 541 aa11.72□□□□□ -0.53
CHRNA1-201ENST00000261007 KCNA3P22001 575 aa11.72□□□□□ -0.53
CHRNA1-201ENST00000261007 ITIH4Q14624 930 aa11.72□□□□□ -0.53
CHRNA1-201ENST00000261007 TNIP1Q15025 636 aa11.72□□□□□ -0.53
CHRNA1-201ENST00000261007 RPS6KA1Q15418 735 aa11.72□□□□□ -0.53
CHRNA1-201ENST00000261007 TRADDQ15628 312 aa11.72□□□□□ -0.53
CHRNA1-201ENST00000261007 ZKSCAN8Q15776 578 aaPredicted RBP11.72□□□□□ -0.53
CHRNA1-201ENST00000261007 SPRED3Q2MJR0 410 aa11.72□□□□□ -0.53
CHRNA1-201ENST00000261007 TDRD12Q587J7 1177 aaKnown RBP11.72□□□□□ -0.53
CHRNA1-201ENST00000261007 FAM83BQ5T0W9 1011 aa11.72□□□□□ -0.53
CHRNA1-201ENST00000261007 CATSPER3Q86XQ3 398 aa11.72□□□□□ -0.53
CHRNA1-201ENST00000261007 ZC3H3Q8IXZ2 948 aaKnown RBP11.72□□□□□ -0.53
CHRNA1-201ENST00000261007 CCDC197Q8NCU1 140 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms