RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 ASIC3Q9UHC3 531 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 PCDHGB3Q9Y5G1 929 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 CCDC66A2RUB6 948 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 PSMD12O00232 456 aaPredicted RBP4.33□□□□□ -1.72
RNF38-201ENST00000259605 CREB3O43889 395 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 GAS2O43903 313 aaKnown RBP4.33□□□□□ -1.72
RNF38-201ENST00000259605 HBP1O60381 514 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 PPP6R2O75170 966 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 RHOBTB3O94955 611 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 CCNB2O95067 398 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 ADH1AP07327 375 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 GJB1P08034 283 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 SERPINB6P35237 376 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 NFIXQ14938 502 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 ZNF827Q17R98 1081 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 TTC23Q5W5X9 447 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 TRMT11Q7Z4G4 463 aaKnown RBP4.33□□□□□ -1.72
RNF38-201ENST00000259605 ARHGAP24Q8N264 748 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 PPM1KQ8N3J5 372 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 ANKS4BQ8N8V4 417 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 ZNF558Q96NG5 402 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 HAPLN3Q96S86 360 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.33□□□□□ -1.72
RNF38-201ENST00000259605 HDAC6Q9UBN7 1215 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 CDV3Q9UKY7 258 aaKnown RBP4.33□□□□□ -1.72
RNF38-201ENST00000259605 USP19O94966 1318 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 ERBB3P21860 1342 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 KDM4FA0A1W2PPD8 638 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 AP3B1O00203 1094 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 MAFGO15525 162 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 ATG13O75143 517 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 CKBP12277 381 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 GRK4P32298 578 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 HSD17B4P51659 736 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 STAT5BP51692 787 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 CYP27A1Q02318 531 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 PPIL2Q13356 520 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 SV2CQ496J9 727 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 PABPC1LQ4VXU2 614 aaKnown RBP4.33□□□□□ -1.72
RNF38-201ENST00000259605 HLA-DQA1Q5Y7H0 255 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 TAF2Q6P1X5 1199 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 ARHGEF18Q6ZSZ5 1173 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 RRM2BQ7LG56 351 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 C16orf62Q7Z3J2 963 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 SZRD1Q7Z422 152 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 CCDC25Q86WR0 208 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 ZNF654Q8IZM8 581 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 CLYBLQ8N0X4 340 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 ANKRD13CQ8N6S4 541 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 PRMT6Q96LA8 375 aaPredicted RBP4.33□□□□□ -1.72
RNF38-201ENST00000259605 EPAS1Q99814 870 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 IDI2Q9BXS1 227 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 STK33Q9BYT3 514 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 TSKSQ9UJT2 592 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 TLK1Q9UKI8 766 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 RUVBL2Q9Y230 463 aaKnown RBP4.33□□□□□ -1.72
RNF38-201ENST00000259605 METP08581 1390 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 HECW2Q9P2P5 1572 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 PNMA6FA0A0J9YX94 578 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 ARHGAP42A6NI28 874 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 E5RI56 91 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 RASGRF2O14827 1237 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 SNX2O60749 519 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 PYGBP11216 843 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 SDSP20132 328 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 GRK3P35626 688 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 ANXA11P50995 505 aaKnown RBP4.32□□□□□ -1.72
RNF38-201ENST00000259605 SCNN1BP51168 640 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 GPC3P51654 580 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 UBASH3AP57075 661 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 CDH18Q13634 790 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 PSMD6Q15008 389 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 PTPN14Q15678 1187 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 NFE2Q16621 373 aaPredicted RBP4.32□□□□□ -1.72
RNF38-201ENST00000259605 FAM83BQ5T0W9 1011 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 NBPF12Q5TAG4 269 aaPredicted RBP4.32□□□□□ -1.72
RNF38-201ENST00000259605 BROXQ5VW32 411 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 IZUMO3Q5VZ72 239 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 ITPRIPL1Q6GPH6 555 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 KLHL35Q6PF15 583 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 MMS22LQ6ZRQ5 1243 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 CPLX4Q7Z7G2 160 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 LUZP2Q86TE4 346 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 MFN1Q8IWA4 741 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 CTAGE3PQ8IX95 158 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 SMAP1Q8IYB5 467 aaPredicted RBP4.32□□□□□ -1.72
RNF38-201ENST00000259605 DIS3L2Q8IYB7 885 aaKnown RBP4.32□□□□□ -1.72
RNF38-201ENST00000259605 PIGBQ92521 554 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 RUNDC3BQ96NL0 473 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 PLIN2Q99541 437 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 TLE6Q9H808 572 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 CPA4Q9UI42 421 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 NR2E1Q9Y466 385 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 PHF20L1A8MW92 1017 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 ODC1P11926 461 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 SDHBP21912 280 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 HALP42357 657 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 TP53BP2Q13625 1128 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 GIT2Q14161 759 aa4.32□□□□□ -1.72
RNF38-201ENST00000259605 SEPT2Q15019 361 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms