RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 GJB7Q6PEY0 223 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.72■□□□□ 0.75
PTPN12-201ENST00000248594 LRRC37BQ96QE4 947 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 ERP44Q9BS26 406 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.72■□□□□ 0.752e-6■■■■■ 88.9
PTPN12-201ENST00000248594 DCTN4Q9UJW0 460 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 LCA5LO95447 670 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 TMED1Q13445 227 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 RBM26Q5T8P6 1007 aaKnown RBP19.71■□□□□ 0.75
PTPN12-201ENST00000248594 JAMLQ86YT9 394 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 PHACTR1Q9C0D0 580 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 SLCO1B3Q9NPD5 702 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 CEP72Q9P209 647 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 MYH1P12882 1939 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 MYH7P12883 1935 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 GSTTP1A0A1W2PQM5 241 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 CAPN9O14815 690 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 OPHN1O60890 802 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 H2AFZP0C0S5 128 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 EVA1CP58658 441 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 USP46P62068 366 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 KIAA1755Q5JYT7 1200 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 TMTC3Q6ZXV5 915 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 H2AFVQ71UI9 128 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 PPFIBP2Q8ND30 876 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 TMEM59LQ9UK28 342 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 LRRC42Q9Y546 428 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 NWD2Q9ULI1 1742 aa19.71■□□□□ 0.75
PTPN12-201ENST00000248594 GOLGA8HP0CJ92 632 aa19.7■□□□□ 0.74
PTPN12-201ENST00000248594 DYNC1I2Q13409 638 aaKnown RBP19.7■□□□□ 0.74
PTPN12-201ENST00000248594 RASGRF1Q13972 1273 aa19.7■□□□□ 0.74
PTPN12-201ENST00000248594 CERKLQ49MI3 558 aaPredicted RBP19.7■□□□□ 0.74
PTPN12-201ENST00000248594 KHDC1Q4VXA5 237 aaKnown RBP19.7■□□□□ 0.74
PTPN12-201ENST00000248594 TPCN2Q8NHX9 752 aa19.7■□□□□ 0.74
PTPN12-201ENST00000248594 ZNF232Q9UNY5 417 aa19.7■□□□□ 0.74
PTPN12-201ENST00000248594 MYMKA6NI61 221 aa19.7■□□□□ 0.74
PTPN12-201ENST00000248594 GALNT17Q6IS24 598 aa19.7■□□□□ 0.74
PTPN12-201ENST00000248594 HS2ST1Q7LGA3 356 aa19.7■□□□□ 0.74
PTPN12-201ENST00000248594 ACTRT1Q8TDG2 376 aa19.7■□□□□ 0.74
PTPN12-201ENST00000248594 ATP8B4Q8TF62 1192 aa19.7■□□□□ 0.74
PTPN12-201ENST00000248594 TNFRSF25Q93038 417 aa19.7■□□□□ 0.74
PTPN12-201ENST00000248594 GJA10Q969M2 543 aa19.7■□□□□ 0.74
PTPN12-201ENST00000248594 DYNLL1P63167 89 aaKnown RBP19.7■□□□□ 0.74
PTPN12-201ENST00000248594 P3H1Q32P28 736 aa19.7■□□□□ 0.74
PTPN12-201ENST00000248594 HP1BP3Q5SSJ5 553 aaPredicted RBP19.7■□□□□ 0.74
PTPN12-201ENST00000248594 ZNF365Q70YC5 407 aa19.7■□□□□ 0.74
PTPN12-201ENST00000248594 STMN2Q93045 179 aa19.7■□□□□ 0.74
PTPN12-201ENST00000248594 NMD3Q96D46 503 aaKnown RBP19.7■□□□□ 0.74
PTPN12-201ENST00000248594 DDX27Q96GQ7 796 aaKnown RBP19.7■□□□□ 0.74
PTPN12-201ENST00000248594 POP1Q99575 1024 aaKnown RBP19.7■□□□□ 0.74
PTPN12-201ENST00000248594 STMN4Q9H169 189 aaPredicted RBP19.7■□□□□ 0.74
PTPN12-201ENST00000248594 CARD9Q9H257 536 aa19.7■□□□□ 0.74
PTPN12-201ENST00000248594 SLITRK6Q9H5Y7 841 aa19.7■□□□□ 0.74
PTPN12-201ENST00000248594 UTRNP46939 3433 aa19.69■□□□□ 0.74
PTPN12-201ENST00000248594 IRS4O14654 1257 aaPredicted RBP19.69■□□□□ 0.74
PTPN12-201ENST00000248594 AFPP02771 609 aaKnown RBP19.69■□□□□ 0.74
PTPN12-201ENST00000248594 GNAZP19086 355 aa19.69■□□□□ 0.74
PTPN12-201ENST00000248594 GALNTL6Q49A17 601 aa19.69■□□□□ 0.74
PTPN12-201ENST00000248594 PWWP2AQ96N64 755 aa19.69■□□□□ 0.74
PTPN12-201ENST00000248594 NAP1L3Q99457 506 aaPredicted RBP19.69■□□□□ 0.74
PTPN12-201ENST00000248594 NOL4O94818 638 aa19.69■□□□□ 0.74
PTPN12-201ENST00000248594 FAM200BP0CF97 657 aa19.69■□□□□ 0.74
PTPN12-201ENST00000248594 RASSF2P50749 326 aa19.69■□□□□ 0.74
PTPN12-201ENST00000248594 DIXDC1Q155Q3 683 aa19.69■□□□□ 0.74
PTPN12-201ENST00000248594 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.69■□□□□ 0.748e-10■■■■■ 44.1
PTPN12-201ENST00000248594 MEGF6O75095 1541 aa19.69■□□□□ 0.74
PTPN12-201ENST00000248594 GFPT2O94808 682 aa19.69■□□□□ 0.74
PTPN12-201ENST00000248594 RBBP8NLQ8NC74 664 aaPredicted RBP19.69■□□□□ 0.74
PTPN12-201ENST00000248594 PGM2Q96G03 612 aa19.69■□□□□ 0.74
PTPN12-201ENST00000248594 DNAJC1Q96KC8 554 aaKnown RBP19.69■□□□□ 0.74
PTPN12-201ENST00000248594 EPB41L4BQ9H329 900 aa19.69■□□□□ 0.74
PTPN12-201ENST00000248594 STOML1Q9UBI4 398 aa19.69■□□□□ 0.74
PTPN12-201ENST00000248594 RASAL2Q9UJF2 1139 aa19.69■□□□□ 0.74
PTPN12-201ENST00000248594 COL4A3BPQ9Y5P4 624 aa19.69■□□□□ 0.74
PTPN12-201ENST00000248594 GPR75-ASB3A0A0A6YYF3 556 aa19.68■□□□□ 0.74
PTPN12-201ENST00000248594 TSPY2A6NKD2 308 aa19.68■□□□□ 0.74
PTPN12-201ENST00000248594 RPL21P46778 160 aaKnown RBP19.68■□□□□ 0.74
PTPN12-201ENST00000248594 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.68■□□□□ 0.74
PTPN12-201ENST00000248594 KIF6Q6ZMV9 814 aa19.68■□□□□ 0.74
PTPN12-201ENST00000248594 TRIM42Q8IWZ5 723 aa19.68■□□□□ 0.74
PTPN12-201ENST00000248594 MCUR1Q96AQ8 359 aa19.68■□□□□ 0.74
PTPN12-201ENST00000248594 ETNK2Q9NVF9 386 aa19.68■□□□□ 0.74
PTPN12-201ENST00000248594 PPP1R9AQ9ULJ8 1098 aa19.68■□□□□ 0.74
PTPN12-201ENST00000248594 BCS1LQ9Y276 419 aa19.68■□□□□ 0.74
PTPN12-201ENST00000248594 ASB3Q9Y575 518 aa19.68■□□□□ 0.74
PTPN12-201ENST00000248594 C4AP0C0L4 1744 aa19.68■□□□□ 0.74
PTPN12-201ENST00000248594 C4BP0C0L5 1744 aa19.68■□□□□ 0.74
PTPN12-201ENST00000248594 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.68■□□□□ 0.74
PTPN12-201ENST00000248594 KRT18P05783 430 aaKnown RBP19.68■□□□□ 0.74
PTPN12-201ENST00000248594 MPP2Q14168 576 aa19.68■□□□□ 0.74
PTPN12-201ENST00000248594 CADPS2Q86UW7 1296 aa19.68■□□□□ 0.74
PTPN12-201ENST00000248594 ASAP3Q8TDY4 903 aa19.68■□□□□ 0.74
PTPN12-201ENST00000248594 BZW2Q9Y6E2 419 aaKnown RBP19.68■□□□□ 0.74
PTPN12-201ENST00000248594 MRC1P22897 1456 aa19.68■□□□□ 0.74
PTPN12-201ENST00000248594 SPATA31D3P0C874 917 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 ATF3P18847 181 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 MYBPC3Q14896 1274 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 ARL6IP4Q66PJ3 421 aaKnown RBP19.67■□□□□ 0.74
PTPN12-201ENST00000248594 SPATA31D4Q6ZUB0 917 aa19.67■□□□□ 0.74
PTPN12-201ENST00000248594 PRUNE1Q86TP1 453 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms