RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 NAP1L1P55209 391 aaKnown RBP23.9■■□□□ 1.42
RNF39-201ENST00000244360 MRPS9P82933 396 aaKnown RBP23.9■■□□□ 1.42
RNF39-201ENST00000244360 ENOX2Q16206 610 aaKnown RBP23.9■■□□□ 1.42
RNF39-201ENST00000244360 MEI1Q5TIA1 1274 aa23.9■■□□□ 1.42
RNF39-201ENST00000244360 EMBQ6PCB8 327 aa23.9■■□□□ 1.42
RNF39-201ENST00000244360 PADI6Q6TGC4 694 aa23.9■■□□□ 1.42
RNF39-201ENST00000244360 KSR1Q8IVT5 923 aa23.9■■□□□ 1.42
RNF39-201ENST00000244360 FMO5P49326 533 aa23.9■■□□□ 1.42
RNF39-201ENST00000244360 SF3B2Q13435 895 aaKnown RBP23.9■■□□□ 1.42
RNF39-201ENST00000244360 TMEM174Q8WUU8 243 aa23.9■■□□□ 1.42
RNF39-201ENST00000244360 FEZ2Q9UHY8 353 aaPredicted RBP23.9■■□□□ 1.42
RNF39-201ENST00000244360 NAGPAQ9UK23 515 aa23.9■■□□□ 1.42
RNF39-201ENST00000244360 PPP1R9AQ9ULJ8 1098 aa23.9■■□□□ 1.42
RNF39-201ENST00000244360 RRP15Q9Y3B9 282 aaKnown RBP23.9■■□□□ 1.42
RNF39-201ENST00000244360 DDX39AO00148 427 aaKnown RBP23.89■■□□□ 1.41
RNF39-201ENST00000244360 MYO1CO00159 1063 aa23.89■■□□□ 1.41
RNF39-201ENST00000244360 ALAS1P13196 640 aa23.89■■□□□ 1.41
RNF39-201ENST00000244360 RPS12P25398 132 aaKnown RBP23.89■■□□□ 1.41
RNF39-201ENST00000244360 GSPT2Q8IYD1 628 aaKnown RBP23.89■■□□□ 1.41
RNF39-201ENST00000244360 JDP2Q8WYK2 163 aa23.89■■□□□ 1.41
RNF39-201ENST00000244360 LRRC1Q9BTT6 524 aa23.89■■□□□ 1.41
RNF39-201ENST00000244360 RAVER2Q9HCJ3 691 aaKnown RBP23.89■■□□□ 1.41
RNF39-201ENST00000244360 PNMA2Q9UL42 364 aa23.89■■□□□ 1.41
RNF39-201ENST00000244360 FRMD4BQ9Y2L6 1034 aa23.89■■□□□ 1.41
RNF39-201ENST00000244360 GRID2IPA4D2P6 1211 aa23.88■■□□□ 1.41
RNF39-201ENST00000244360 AGPSO00116 658 aa23.88■■□□□ 1.41
RNF39-201ENST00000244360 EGFRP00533 1210 aa23.88■■□□□ 1.41
RNF39-201ENST00000244360 ALCAMQ13740 583 aa23.88■■□□□ 1.41
RNF39-201ENST00000244360 LRRC31Q6UY01 552 aa23.88■■□□□ 1.41
RNF39-201ENST00000244360 FAM76AQ8TAV0 307 aa23.88■■□□□ 1.41
RNF39-201ENST00000244360 PSMB7Q99436 277 aa23.88■■□□□ 1.41
RNF39-201ENST00000244360 STIM2Q9P246 746 aa23.88■■□□□ 1.41
RNF39-201ENST00000244360 SCAF8Q9UPN6 1271 aaKnown RBP23.88■■□□□ 1.41
RNF39-201ENST00000244360 DAAM1Q9Y4D1 1078 aa23.88■■□□□ 1.41
RNF39-201ENST00000244360 ZHX2Q9Y6X8 837 aa23.88■■□□□ 1.41
RNF39-201ENST00000244360 GOLGA8KD6RF30 607 aa23.88■■□□□ 1.41
RNF39-201ENST00000244360 FLOT1O75955 427 aa23.88■■□□□ 1.41
RNF39-201ENST00000244360 CLSTN1O94985 981 aa23.88■■□□□ 1.41
RNF39-201ENST00000244360 FERP16591 822 aa23.88■■□□□ 1.41
RNF39-201ENST00000244360 CPXCR1Q8N123 301 aa23.88■■□□□ 1.41
RNF39-201ENST00000244360 MYH11P35749 1972 aa23.88■■□□□ 1.41
RNF39-201ENST00000244360 OPA1O60313 960 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 GFPT2O94808 682 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 CYP2J2P51589 502 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 NNTQ13423 1086 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 CFAP221Q4G0U5 840 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 DALRD3Q5D0E6 543 aaKnown RBP23.87■■□□□ 1.41
RNF39-201ENST00000244360 GJB7Q6PEY0 223 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 DEFB132Q7Z7B7 95 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 CAVIN3Q969G5 261 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 TBC1D22BQ9NU19 505 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 SMARCAL1Q9NZC9 954 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 EHD2Q9NZN4 543 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 PKD2L1Q9P0L9 805 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 SHOX2O60902 331 aaPredicted RBP23.87■■□□□ 1.41
RNF39-201ENST00000244360 PPFIA4O75335 1185 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 FTCDO95954 541 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 VCAM1P19320 739 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 QARSP47897 775 aaKnown RBP23.87■■□□□ 1.41
RNF39-201ENST00000244360 RARRES1P49788 294 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 MTMR1Q13613 665 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 C8orf74Q6P047 294 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 ALKBH5Q6P6C2 394 aaKnown RBP23.87■■□□□ 1.41
RNF39-201ENST00000244360 SND1Q7KZF4 910 aaKnown RBP eCLIP23.87■■□□□ 1.41
RNF39-201ENST00000244360 OLIG1Q8TAK6 271 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 TRERF1Q96PN7 1200 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 RASSF4Q9H2L5 321 aa23.87■■□□□ 1.41
RNF39-201ENST00000244360 GOLGA6CA6NDK9 693 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 GOLGA6DP0CG33 693 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 STAT1P42224 750 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 DGKZQ13574 1117 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 ALS2CLQ60I27 953 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 STK33Q9BYT3 514 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 GOLGA6AQ9NYA3 693 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 INTUQ9ULD6 942 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 NFKBIEO00221 500 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 CES2O00748 559 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 RPS6P62753 249 aaKnown RBP23.86■■□□□ 1.41
RNF39-201ENST00000244360 PPFIA1Q13136 1202 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 PGM5Q15124 567 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 CBWD6Q4V339 395 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 CBWD3Q5JTY5 395 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 CBWD5Q5RIA9 395 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 VPS36Q86VN1 386 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 C12orf56Q8IXR9 622 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 GDAP1L1Q96MZ0 367 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 INPP4AQ96PE3 977 aaPredicted RBP23.86■■□□□ 1.41
RNF39-201ENST00000244360 TAAR1Q96RJ0 339 aa23.86■■□□□ 1.41
RNF39-201ENST00000244360 LARSQ9P2J5 1176 aaKnown RBP23.86■■□□□ 1.41
RNF39-201ENST00000244360 DMGDHQ9UI17 866 aaKnown RBP23.86■■□□□ 1.41
RNF39-201ENST00000244360 F8VZ95 297 aa23.85■■□□□ 1.41
RNF39-201ENST00000244360 K7ENM7 598 aa23.85■■□□□ 1.41
RNF39-201ENST00000244360 SPP2Q13103 211 aa23.85■■□□□ 1.41
RNF39-201ENST00000244360 IFI16Q16666 785 aaKnown RBP23.85■■□□□ 1.41
RNF39-201ENST00000244360 HDAC7Q8WUI4 952 aa23.85■■□□□ 1.41
RNF39-201ENST00000244360 SH3GL2Q99962 352 aa23.85■■□□□ 1.41
RNF39-201ENST00000244360 TMEM206Q9H813 350 aa23.85■■□□□ 1.41
RNF39-201ENST00000244360 RBM12Q9NTZ6 932 aaKnown RBP23.85■■□□□ 1.41
RNF39-201ENST00000244360 BRCA1P38398 1863 aaKnown RBP23.85■■□□□ 1.41
RNF39-201ENST00000244360 DDX3XO00571 662 aaKnown RBP eCLIP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms