RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 GSDMAQ96QA5 445 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 TAF1DQ9H5J8 278 aaPredicted RBP8.06□□□□□ -1.12
RIF1-201ENST00000243326 ASXL2Q76L83 1435 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 COPEO14579 308 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 TTC4O95801 387 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 TMEM191BP0C7N4 346 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 SRGAP2CP0DJJ0 459 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 PHKG2P15735 406 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 PEX3P56589 373 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 TRPC5Q9UL62 973 aaPredicted RBP8.06□□□□□ -1.12
RIF1-201ENST00000243326 LGALS16A8MUM7 142 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 KCNA3P22001 575 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 PDXDC1Q6P996 788 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 LARSQ9P2J5 1176 aaKnown RBP8.05□□□□□ -1.12
RIF1-201ENST00000243326 SRP68Q9UHB9 627 aaKnown RBP8.05□□□□□ -1.12
RIF1-201ENST00000243326 ANGPTL3Q9Y5C1 460 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 SPAG17Q6Q759 2223 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 EIF2AK2P19525 551 aaKnown RBP8.05□□□□□ -1.12
RIF1-201ENST00000243326 ZNF577Q9BSK1 485 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 OSBPL5Q9H0X9 879 aaPredicted RBP8.05□□□□□ -1.12
RIF1-201ENST00000243326 PGM1P36871 562 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 TCIRG1Q13488 830 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 STMN1P16949 149 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 C9orf72Q96LT7 481 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 CNOT10Q9H9A5 744 aaKnown RBP8.05□□□□□ -1.12
RIF1-201ENST00000243326 NGRNQ9NPE2 291 aaKnown RBP8.05□□□□□ -1.12
RIF1-201ENST00000243326 KIAA0232Q92628 1395 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 RAD51CO43502 376 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 BNIP3LO60238 219 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 MCF2P10911 925 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 MAPK10P53779 464 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 ADCY2Q08462 1091 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 ZIM3Q96PE6 472 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 OSBPL3Q9H4L5 887 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 PALMDQ9NP74 551 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 SFMBT1Q9UHJ3 866 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 HEATR1Q9H583 2144 aaKnown RBP8.05□□□□□ -1.12
RIF1-201ENST00000243326 FTLP02792 175 aaPredicted RBP8.05□□□□□ -1.12
RIF1-201ENST00000243326 COASYQ13057 564 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 PLXNC1O60486 1568 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 GARSP41250 739 aaKnown RBP8.05□□□□□ -1.12
RIF1-201ENST00000243326 ATP6V1E2Q96A05 226 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 LZTS2Q9BRK4 669 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 NUP85Q9BW27 656 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 UBN1Q9NPG3 1134 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 KCNJ1P48048 391 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 IRAK1P51617 712 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 SLC8A3P57103 927 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 POU5F1BQ06416 359 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 ZBED8Q8IZ13 594 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 CFAP74Q9C0B2 1584 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 SPDYE2BA6NHP3 402 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 SPDYE6P0CI01 402 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 CCDC85BQ15834 202 aaPredicted RBP8.05□□□□□ -1.12
RIF1-201ENST00000243326 ZBTB38Q8NAP3 1195 aaPredicted RBP8.05□□□□□ -1.12
RIF1-201ENST00000243326 FGFR1OP2Q9NVK5 253 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 SLC16A4O15374 487 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 MFAP3P55082 362 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 SPATA4Q8NEY3 305 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.05□□□□□ -1.12
RIF1-201ENST00000243326 RNPEPQ9H4A4 650 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 DDX28Q9NUL7 540 aaKnown RBP8.05□□□□□ -1.12
RIF1-201ENST00000243326 TMEM51Q9NW97 253 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 ARHGEF25Q86VW2 580 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 CHMP2BQ9UQN3 213 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 ZCCHC18P0CG32 403 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 ARFIP2P53365 341 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 RPS8P62241 208 aaKnown RBP8.05□□□□□ -1.12
RIF1-201ENST00000243326 TXNRD1Q16881 649 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 GLYCTKQ8IVS8 523 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 ACCSQ96QU6 501 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 TEKT3Q9BXF9 490 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 PRDM4Q9UKN5 801 aa8.05□□□□□ -1.12
RIF1-201ENST00000243326 KIF24Q5T7B8 1368 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 TARSP26639 723 aaKnown RBP8.04□□□□□ -1.12
RIF1-201ENST00000243326 NLRP11P59045 1033 aaKnown RBP8.04□□□□□ -1.12
RIF1-201ENST00000243326 PTK2Q05397 1052 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 MLH3Q9UHC1 1453 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 MEFVO15553 781 aaPredicted RBP8.04□□□□□ -1.12
RIF1-201ENST00000243326 FHOD1Q9Y613 1164 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 PSMA2P25787 234 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 RWDD2BP57060 319 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 IQCB1Q15051 598 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 HEATR4Q86WZ0 1026 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 SPZ1Q9BXG8 430 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 KRT17Q04695 432 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 DMP1Q13316 513 aaPredicted RBP8.04□□□□□ -1.12
RIF1-201ENST00000243326 CEP19Q96LK0 163 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 DLGAP2Q9P1A6 1054 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 MCF2LO15068 1137 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 TAL1P17542 331 aaPredicted RBP8.04□□□□□ -1.12
RIF1-201ENST00000243326 OCRLQ01968 901 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 SPATA21Q7Z572 469 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 MRPL42Q9Y6G3 142 aaKnown RBP8.04□□□□□ -1.12
RIF1-201ENST00000243326 LRRIQ3A6PVS8 624 aaPredicted RBP8.04□□□□□ -1.12
RIF1-201ENST00000243326 EIF3HO15372 352 aaKnown RBP eCLIP8.04□□□□□ -1.122e-6■■■□□ 15.4
RIF1-201ENST00000243326 DDAH1O94760 285 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 CPA5Q8WXQ8 436 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 MECOMQ03112 1051 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 SPOUT1Q5T280 376 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms