RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 TMC5Q6UXY8 1006 aa9.53□□□□□ -0.88
IFT43-201ENST00000238628 RALYLQ86SE5 291 aaKnown RBP9.53□□□□□ -0.88
IFT43-201ENST00000238628 TMEM87AQ8NBN3 555 aa9.53□□□□□ -0.88
IFT43-201ENST00000238628 ZBTB44Q8NCP5 570 aa9.53□□□□□ -0.88
IFT43-201ENST00000238628 NCOA7Q8NI08 942 aa9.53□□□□□ -0.88
IFT43-201ENST00000238628 RSAD2Q8WXG1 361 aa9.53□□□□□ -0.88
IFT43-201ENST00000238628 ZBTB10Q96DT7 871 aa9.53□□□□□ -0.88
IFT43-201ENST00000238628 BCO2Q9BYV7 579 aa9.53□□□□□ -0.88
IFT43-201ENST00000238628 CELF4Q9BZC1 486 aaKnown RBP9.53□□□□□ -0.88
IFT43-201ENST00000238628 AZI2Q9H6S1 392 aa9.53□□□□□ -0.88
IFT43-201ENST00000238628 TYW1Q9NV66 732 aaKnown RBP9.53□□□□□ -0.88
IFT43-201ENST00000238628 DZANK1Q9NVP4 752 aa9.53□□□□□ -0.88
IFT43-201ENST00000238628 PCDHB7Q9Y5E2 793 aa9.53□□□□□ -0.88
IFT43-201ENST00000238628 SRRM3A6NNA2 597 aaPredicted RBP9.52□□□□□ -0.89
IFT43-201ENST00000238628 TAF4O00268 1085 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 GDF9O60383 454 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 LILRB5O75023 590 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 LRRN2O75325 713 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 CYP21A2P08686 494 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 SRFP11831 508 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 ITGB5P18084 799 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 LAG3P18627 525 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 SMARCA1P28370 1054 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 KRT17Q04695 432 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 NFX1Q12986 1120 aaKnown RBP9.52□□□□□ -0.89
IFT43-201ENST00000238628 MTMR1Q13613 665 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 SMC1AQ14683 1233 aaKnown RBP9.52□□□□□ -0.89
IFT43-201ENST00000238628 LPAL2Q16609 132 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 DCLRE1AQ6PJP8 1040 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 NME8Q8N427 588 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 SLC44A3Q8N4M1 653 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 PJA1Q8NG27 643 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 CTCFLQ8NI51 663 aaPredicted RBP9.52□□□□□ -0.89
IFT43-201ENST00000238628 GPR152Q8TDT2 470 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 FOXQ1Q9C009 403 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 IL25Q9H293 177 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 PSTPIP2Q9H939 334 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 ARHGEF3Q9NR81 526 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 HCSTQ9UBK5 93 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 SEC63Q9UGP8 760 aaKnown RBP9.52□□□□□ -0.89
IFT43-201ENST00000238628 PCDHA2Q9Y5H9 948 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 UBIAD1Q9Y5Z9 338 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 IGSF9BQ9UPX0 1349 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 MAST4O15021 2626 aa9.52□□□□□ -0.89
IFT43-201ENST00000238628 CEP295Q9C0D2 2601 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 SMIM35A0A1B0GVV1 85 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 C2orf71A6NGG8 1288 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 SPDYE4A6NLX3 237 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 E7EWF7 191 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 IGHDP01880 384 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 KIF5BP33176 963 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 SARSP49591 514 aaKnown RBP9.51□□□□□ -0.89
IFT43-201ENST00000238628 KRT76Q01546 638 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 NUCB1Q02818 461 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 TMEM266Q2M3C6 531 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 PRR23CQ6ZRP0 262 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 MRPL43Q8N983 215 aaKnown RBP9.51□□□□□ -0.89
IFT43-201ENST00000238628 IGDCC4Q8TDY8 1250 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 TRAPPC12Q8WVT3 735 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 KIF12Q96FN5 646 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 PCYT2Q99447 389 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 MAP3K14Q99558 947 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 SPZ1Q9BXG8 430 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 TMX1Q9H3N1 280 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 JADE2Q9NQC1 790 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 SEMA4GQ9NTN9 838 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 SLC9A2Q9UBY0 812 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 GCN1Q92616 2671 aaKnown RBP9.51□□□□□ -0.89
IFT43-201ENST00000238628 ASPMQ8IZT6 3477 aa9.51□□□□□ -0.89
IFT43-201ENST00000238628 TMEM8BA6NDV4 472 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 SPDYE3A6NKU9 549 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 RPS6KA5O75582 802 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 GBP2P32456 591 aaPredicted RBP9.5□□□□□ -0.89
IFT43-201ENST00000238628 GNAQP50148 359 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 STAT5BP51692 787 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 PTH1RQ03431 593 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 AAMPQ13685 434 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 BMS1Q14692 1282 aaKnown RBP9.5□□□□□ -0.89
IFT43-201ENST00000238628 PLCB4Q15147 1175 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 PTPN14Q15678 1187 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 ODR4Q5SWX8 454 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 FAM102BQ5T8I3 360 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 LAIR1Q6GTX8 287 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 MTHFD1LQ6UB35 978 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 FAM43BQ6ZT52 329 aaPredicted RBP9.5□□□□□ -0.89
IFT43-201ENST00000238628 PLPPR4Q7Z2D5 763 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 CABP7Q86V35 215 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 SHDQ96IW2 340 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 LZTS2Q9BRK4 669 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 MYL10Q9BUA6 226 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 JPH1Q9HDC5 661 aaPredicted RBP9.5□□□□□ -0.89
IFT43-201ENST00000238628 RGS18Q9NS28 235 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 C1orf112Q9NSG2 853 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 PCDHA6Q9UN73 950 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 GINS2Q9Y248 185 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 PCDHA8Q9Y5H6 950 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 KDM3AQ9Y4C1 1321 aa9.5□□□□□ -0.89
IFT43-201ENST00000238628 NAV2Q8IVL1 2488 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 DENND3A2RUS2 1198 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 MGEA5O60502 916 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms