RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 ATP5DP30049 168 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 GBP1P32455 592 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 ABCD1P33897 745 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 OAZ1P54368 228 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 TREML2Q5T2D2 321 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 ZNF354CQ86Y25 554 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 LRRC71Q8N4P6 559 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 XXYLT1Q8NBI6 393 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 TMEM106CQ9BVX2 250 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 SEL1LQ9UBV2 794 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 FEZ2Q9UHY8 353 aaPredicted RBP10.2□□□□□ -0.78
CCDC113-201ENST00000219299 MYMKA6NI61 221 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 SPDYE16A6NNV3 312 aaPredicted RBP10.19□□□□□ -0.78
CCDC113-201ENST00000219299 LRRN2O75325 713 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 FXR2P51116 673 aaKnown RBP eCLIP10.19□□□□□ -0.78
CCDC113-201ENST00000219299 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.19□□□□□ -0.78
CCDC113-201ENST00000219299 CROCCP2Q86T23 111 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 ANKRD36BP1Q96IX9 119 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 INPP5FQ9Y2H2 1132 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 STAM2O75886 525 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 VIMP08670 466 aaKnown RBP10.19□□□□□ -0.78
CCDC113-201ENST00000219299 FERP16591 822 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 ATF7P17544 494 aaPredicted RBP10.19□□□□□ -0.78
CCDC113-201ENST00000219299 HPDP32754 393 aaPredicted RBP10.19□□□□□ -0.78
CCDC113-201ENST00000219299 PTGER2P43116 358 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 SNX16P57768 344 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 PLCB3Q01970 1234 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 TMEM132BQ14DG7 1078 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 KNOP1Q1ED39 458 aaKnown RBP10.19□□□□□ -0.78
CCDC113-201ENST00000219299 TSNAXIP1Q2TAA8 658 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 DCUN1D2Q6PH85 259 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 STMN2Q93045 179 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 WNK4Q96J92 1243 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 CFAP57Q96MR6 1250 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 PURBQ96QR8 312 aaKnown RBP10.19□□□□□ -0.78
CCDC113-201ENST00000219299 FAM213AQ9BRX8 229 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 RANBP17Q9H2T7 1088 aaKnown RBP10.19□□□□□ -0.78
CCDC113-201ENST00000219299 CTTNBP2NLQ9P2B4 639 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 SUCLA2Q9P2R7 463 aaPredicted RBP10.19□□□□□ -0.78
CCDC113-201ENST00000219299 PITPNM2Q9BZ72 1349 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 ATP8B1O43520 1251 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 NR3C1P04150 777 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 DGKDQ16760 1214 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 RPGRIP1Q96KN7 1286 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 GLT1D1Q96MS3 346 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 REEP2Q9BRK0 252 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 NUCKS1Q9H1E3 243 aaKnown RBP10.19□□□□□ -0.78
CCDC113-201ENST00000219299 UNC45AQ9H3U1 944 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 TMEM88BA6NKF7 163 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 EFCAB8A8MWE9 144 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 SPOPO43791 374 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 ABCB4P21439 1286 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 YWHAEP62258 255 aaKnown RBP10.19□□□□□ -0.78
CCDC113-201ENST00000219299 PGM5Q15124 567 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 TSNARE1Q96NA8 513 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 GCOM2Q9BZD3 368 aaPredicted RBP10.19□□□□□ -0.78
CCDC113-201ENST00000219299 KCNK9Q9NPC2 374 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 NKIRAS1Q9NYS0 192 aa10.19□□□□□ -0.78
CCDC113-201ENST00000219299 FAM86B1E9PN63 330 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 FAM86B2P0C5J1 330 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 CYP4F22Q6NT55 531 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 GUF1Q8N442 669 aaKnown RBP10.18□□□□□ -0.78
CCDC113-201ENST00000219299 KIAA1524Q8TCG1 905 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 JAKMIP2Q96AA8 810 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 MRFAP1L1Q96HT8 127 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 NDST4Q9H3R1 872 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 PPFIA4O75335 1185 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 ERCC6LQ2NKX8 1250 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 PCNX4Q63HM2 1172 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 ZNF746Q6NUN9 644 aaPredicted RBP10.18□□□□□ -0.78
CCDC113-201ENST00000219299 SAMD3Q8N6K7 520 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 DNERQ8NFT8 737 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCDC113-201ENST00000219299 U2AF1L4Q8WU68 220 aaKnown RBP10.18□□□□□ -0.78
CCDC113-201ENST00000219299 AFG1LQ8WV93 481 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 SAAL1Q96ER3 474 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 MYO1AQ9UBC5 1043 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 KBTBD13C9JR72 458 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 PEX10O60683 326 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 CASP14P31944 242 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 STK4Q13043 487 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 MOXD1Q6UVY6 613 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 PPP4R3CPQ6ZMV5 832 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 CACTINQ8WUQ7 758 aaKnown RBP10.18□□□□□ -0.78
CCDC113-201ENST00000219299 NAP1L3Q99457 506 aaPredicted RBP10.18□□□□□ -0.78
CCDC113-201ENST00000219299 VCXQ9H320 206 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 SMIM23A6NLE4 172 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 HIRAP54198 1017 aaPredicted RBP10.18□□□□□ -0.78
CCDC113-201ENST00000219299 CALCOCO2Q13137 446 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 LY6KQ17RY6 165 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 EP400NLQ6ZTU2 488 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 C2orf40Q9H1Z8 148 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 PRDM5Q9NQX1 630 aaPredicted RBP10.18□□□□□ -0.78
CCDC113-201ENST00000219299 GCNT4Q9P109 453 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 TACC3Q9Y6A5 838 aa10.18□□□□□ -0.78
CCDC113-201ENST00000219299 COL1A1P02452 1464 aaPredicted RBP10.18□□□□□ -0.78
CCDC113-201ENST00000219299 MED24O75448 989 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 CYP2C9P11712 490 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 CYP2C19P33261 490 aa10.17□□□□□ -0.78
CCDC113-201ENST00000219299 LIN9Q5TKA1 542 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms