RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 PNMA5Q96PV4 448 aa13.57□□□□□ -0.24
SNU13-201ENST00000215956 CTAGE1Q96RT6 745 aa13.57□□□□□ -0.24
SNU13-201ENST00000215956 PLIN2Q99541 437 aa13.57□□□□□ -0.24
SNU13-201ENST00000215956 MTRQ99707 1265 aa13.57□□□□□ -0.24
SNU13-201ENST00000215956 POLR3CQ9BUI4 534 aaPredicted RBP13.57□□□□□ -0.24
SNU13-201ENST00000215956 TUFT1Q9NNX1 390 aa13.57□□□□□ -0.24
SNU13-201ENST00000215956 LMCD1Q9NZU5 365 aa13.57□□□□□ -0.24
SNU13-201ENST00000215956 IMPACTQ9P2X3 320 aa13.57□□□□□ -0.24
SNU13-201ENST00000215956 ADD3Q9UEY8 706 aaKnown RBP13.57□□□□□ -0.24
SNU13-201ENST00000215956 NFE2L3Q9Y4A8 694 aa13.57□□□□□ -0.24
SNU13-201ENST00000215956 IGLV3-22A0A075B6J6 115 aa13.56□□□□□ -0.24
SNU13-201ENST00000215956 LOC102724159A0A0B4J2E5 919 aa13.56□□□□□ -0.24
SNU13-201ENST00000215956 RBM47A0AV96 593 aaKnown RBP13.56□□□□□ -0.24
SNU13-201ENST00000215956 LCHNA4D1U4 455 aa13.56□□□□□ -0.24
SNU13-201ENST00000215956 MEIS1O00470 390 aa13.56□□□□□ -0.24
SNU13-201ENST00000215956 NFIBO00712 420 aa13.56□□□□□ -0.24
SNU13-201ENST00000215956 NRDCO43847 1150 aa13.56□□□□□ -0.24
SNU13-201ENST00000215956 STAM2O75886 525 aa13.56□□□□□ -0.24
SNU13-201ENST00000215956 KIF20AO95235 890 aa13.56□□□□□ -0.24
SNU13-201ENST00000215956 GSDMDP57764 484 aa13.56□□□□□ -0.24
SNU13-201ENST00000215956 PPP2R5CQ13362 524 aa13.56□□□□□ -0.24
SNU13-201ENST00000215956 BAATQ14032 418 aaPredicted RBP13.56□□□□□ -0.24
SNU13-201ENST00000215956 PWP2Q15269 919 aaKnown RBP13.56□□□□□ -0.24
SNU13-201ENST00000215956 NCAPH2Q6IBW4 605 aa13.56□□□□□ -0.24
SNU13-201ENST00000215956 ALYREFQ86V81 257 aaKnown RBP13.56□□□□□ -0.24
SNU13-201ENST00000215956 STAMQ92783 540 aa13.56□□□□□ -0.24
SNU13-201ENST00000215956 DHTKD1Q96HY7 919 aaPredicted RBP13.56□□□□□ -0.24
SNU13-201ENST00000215956 ZNF577Q9BSK1 485 aa13.56□□□□□ -0.24
SNU13-201ENST00000215956 DNM3Q9UQ16 869 aa13.56□□□□□ -0.24
SNU13-201ENST00000215956 NOD1Q9Y239 953 aa13.56□□□□□ -0.24
SNU13-201ENST00000215956 MAFGO15525 162 aa13.55□□□□□ -0.24
SNU13-201ENST00000215956 AP5Z1O43299 807 aa13.55□□□□□ -0.24
SNU13-201ENST00000215956 WDR5P61964 334 aaKnown RBP13.55□□□□□ -0.24
SNU13-201ENST00000215956 RPS6P62753 249 aaKnown RBP13.55□□□□□ -0.24
SNU13-201ENST00000215956 FANCCQ00597 558 aa13.55□□□□□ -0.24
SNU13-201ENST00000215956 PTPN11Q06124 597 aaPredicted RBP13.55□□□□□ -0.24
SNU13-201ENST00000215956 PDE4DQ08499 809 aa13.55□□□□□ -0.24
SNU13-201ENST00000215956 ARHGEF16Q5VV41 709 aa13.55□□□□□ -0.24
SNU13-201ENST00000215956 NLRX1Q86UT6 975 aa13.55□□□□□ -0.24
SNU13-201ENST00000215956 GIMAP8Q8ND71 665 aaPredicted RBP13.55□□□□□ -0.24
SNU13-201ENST00000215956 TBC1D5Q92609 795 aa13.55□□□□□ -0.24
SNU13-201ENST00000215956 BLOC1S4Q9NUP1 217 aa13.55□□□□□ -0.24
SNU13-201ENST00000215956 ZKSCAN5Q9Y2L8 839 aa13.55□□□□□ -0.24
SNU13-201ENST00000215956 PRR33A8MZF0 331 aa13.54□□□□□ -0.24
SNU13-201ENST00000215956 B4DLN1 442 aa13.54□□□□□ -0.24
SNU13-201ENST00000215956 PPP1R3GB7ZBB8 358 aa13.54□□□□□ -0.24
SNU13-201ENST00000215956 KLRC4O43908 158 aa13.54□□□□□ -0.24
SNU13-201ENST00000215956 KPNA6O60684 536 aa13.54□□□□□ -0.24
SNU13-201ENST00000215956 CCND2P30279 289 aa13.54□□□□□ -0.24
SNU13-201ENST00000215956 UBASH3AP57075 661 aa13.54□□□□□ -0.24
SNU13-201ENST00000215956 SPIRE1Q08AE8 756 aa13.54□□□□□ -0.24
SNU13-201ENST00000215956 MCM6Q14566 821 aa13.54□□□□□ -0.24
SNU13-201ENST00000215956 FILIP1LQ4L180 1135 aa13.54□□□□□ -0.24
SNU13-201ENST00000215956 TMCO2Q7Z6W1 182 aaPredicted RBP13.54□□□□□ -0.24
SNU13-201ENST00000215956 CCDC65Q8IXS2 484 aa13.54□□□□□ -0.24
SNU13-201ENST00000215956 CDHR1Q96JP9 859 aa13.54□□□□□ -0.24
SNU13-201ENST00000215956 UBE2ZQ9H832 354 aaPredicted RBP13.54□□□□□ -0.24
SNU13-201ENST00000215956 JADE2Q9NQC1 790 aa13.54□□□□□ -0.24
SNU13-201ENST00000215956 TBC1D22BQ9NU19 505 aa13.54□□□□□ -0.24
SNU13-201ENST00000215956 FANCLQ9NW38 375 aa13.54□□□□□ -0.24
SNU13-201ENST00000215956 VAV3Q9UKW4 847 aa13.54□□□□□ -0.24
SNU13-201ENST00000215956 KIAA1024Q9UPX6 916 aa13.54□□□□□ -0.24
SNU13-201ENST00000215956 UBIAD1Q9Y5Z9 338 aa13.54□□□□□ -0.24
SNU13-201ENST00000215956 A6NJR5 290 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 NKRFO15226 690 aaKnown RBP eCLIP13.53□□□□□ -0.24
SNU13-201ENST00000215956 PSMD10O75832 226 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 FGFR1OPO95684 399 aaKnown RBP13.53□□□□□ -0.24
SNU13-201ENST00000215956 CASP1P29466 404 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 EPHA7Q15375 998 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 KLHL10Q6JEL2 608 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 FAM114A1Q8IWE2 563 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 ADSSL1Q8N142 457 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 GJD3Q8N144 294 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 CCDC155Q8N6L0 562 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 CAGE1Q8TC20 777 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 NSUN6Q8TEA1 469 aaKnown RBP13.53□□□□□ -0.24
SNU13-201ENST00000215956 NELFBQ8WX92 580 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 RMDN3Q96TC7 470 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 MPHOSPH6Q99547 160 aaKnown RBP13.53□□□□□ -0.24
SNU13-201ENST00000215956 ZBED2Q9BTP6 218 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 PXMP2Q9NR77 195 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 IFNKQ9P0W0 207 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 MTUS1Q9ULD2 1270 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 CTNND2Q9UQB3 1225 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 TRIOO75962 3097 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 IPO5O00410 1097 aaKnown RBP13.53□□□□□ -0.24
SNU13-201ENST00000215956 TPM2P07951 284 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 PLA2G4BP0C869 781 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 ZNF18P17022 549 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 DEFB103AP81534 67 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 PGM5Q15124 567 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 PTGISQ16647 500 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 LEXMQ3ZCV2 418 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 FOXR2Q6PJQ5 311 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 SLC30A10Q6XR72 485 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 FAM178BQ8IXR5 827 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 SPC24Q8NBT2 197 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 DNERQ8NFT8 737 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 AFAP1L1Q8TED9 768 aa13.53□□□□□ -0.24
SNU13-201ENST00000215956 SCFD2Q8WU76 684 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms