RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Cog5Q8C0L8 829 aa14.62□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Ubxn2aQ99KJ0 258 aa14.62□□□□□ -0.07
Rnf4-204ENSMUST00000182047 C2cd2E9Q3C1 696 aa14.62□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Nap1l1P28656 391 aaKnown RBP14.62□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Gna14P30677 355 aa14.62□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Tubb4bP68372 445 aaKnown RBP14.62□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Cct8l1Q80YT3 562 aa14.62□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Trim6Q8BGE7 488 aa14.62□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Spata16Q8C636 571 aa14.62□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Fam20aQ8CID3 541 aa14.62□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Parp10Q8CIE4 960 aa14.62□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Smtnl1Q99LM3 459 aa14.62□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Fzd9Q9R216 592 aa14.62□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Ep400Q8CHI8 3072 aaKnown RBP14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 PhipQ8VDD9 1821 aaKnown RBP14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Pgap3A2A559 320 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Ttll6A4Q9E8 822 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Gm8298J3QPI0 401 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 SpibO35906 267 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Serpina1aP07758 413 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Serpina1bP22599 413 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Serpina1cQ00896 412 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Serpina1dQ00897 413 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Hdhd2Q3UGR5 259 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Pnma1Q8C1C8 353 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Def6Q8C2K1 630 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 VillQ91YD6 859 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Ubxn1Q922Y1 297 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 AvenQ9D9K3 342 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Cyp2s1Q9DBX6 501 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Ddx25Q9QY15 484 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Ccnd3P30282 292 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Tcerg1lQ3B807 590 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Fam107bQ3TGF2 131 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Tmem63bQ3TWI9 832 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Krt42Q6IFX2 452 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Adcy2Q80TL1 1090 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Tcp10aQ80W76 438 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Slc17a8Q8BFU8 601 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Rufy1Q8BIJ7 712 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Pgm5Q8BZF8 567 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Eif3cQ8R1B4 911 aaKnown RBP14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Klra10Q9R1G6 266 aa14.61□□□□□ -0.07
Rnf4-204ENSMUST00000182047 1700016G14RikA0A286YCZ6 238 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Ppfia4B8QI36 1187 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Gcnt4E9Q649 455 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Folh1O35409 752 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Rbm46P86049 533 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Kdm7aQ3UWM4 940 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Ncapg2Q6DFV1 1138 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Lrrc24Q8BHA1 521 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Asic2Q925H0 512 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Plagl2Q925T4 496 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 KynuQ9CXF0 464 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Stx17Q9D0I4 301 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 DgkiD3YWQ0 1071 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Ap1b1O35643 943 aaKnown RBP14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Stra6O70491 670 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Cyp11b2P15539 500 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Tubb5P99024 444 aaKnown RBP14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Sco1Q5SUC9 284 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Krt31Q61765 416 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 NntQ61941 1086 aaKnown RBP14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Hdac10Q6P3E7 666 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Mcph1Q7TT79 822 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Hsdl1Q8BTX9 330 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Scyl2Q8CFE4 930 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Sgms1Q8VCQ6 419 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Erlin1Q91X78 346 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Ranbp17Q99NF8 1088 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Tmod4Q9JLH8 345 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Nfu1Q9QZ23 255 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 S1pr4Q9Z0L1 386 aa14.6□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Sema4dO09126 861 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 PurbO35295 324 aaKnown RBP14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 SfnO70456 248 aaKnown RBP14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 SlmapQ3URD3 845 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Msantd2Q6NZR2 559 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Ireb2Q811J3 963 aaKnown RBP14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Stap2Q8R0L1 411 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Znf445Q8R2V3 986 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 CbsQ91WT9 561 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 1700020D05RikQ99PB1 294 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Psma7Q9Z2U0 248 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Gm11549A0A286YD83 63 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Mdm4O35618 489 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Magea8O89012 320 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Taf1bP97358 586 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Olfm4Q3UZZ4 505 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 E2f8Q58FA4 860 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Abhd15Q5F2F2 459 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Gm5169Q5M8P2 212 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Rgl2Q61193 778 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Dusp4Q8BFV3 398 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Gpr180Q8BPS4 441 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Sulf1Q8K007 870 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 AagabQ8R2R3 316 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Fam111aQ9D2L9 613 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Skor2A7M7C7 1008 aa14.59□□□□□ -0.07
Rnf4-204ENSMUST00000182047 Trim55G3X8Y1 545 aa14.59□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms