RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Neurl4Q5NCX5 1563 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 1700003F12RikA2AKE5 210 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Supt3B0QZW4 406 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Vwa3aQ3UVV9 1148 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Tmed1Q3V009 227 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Epc1Q8C9X6 813 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Gnl3Q8CI11 538 aaKnown RBP11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Usp15Q8R5H1 981 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Ndufv1Q91YT0 464 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Fuca2Q99KR8 461 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Snx24Q9CRB0 169 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Noxred1Q9D3S5 366 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Kbtbd12Q9D618 625 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Xrn1P97789 1719 aaKnown RBP11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Gjb4Q02738 266 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Trim71Q1PSW8 855 aaKnown RBP11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Olfr832Q7TRG9 312 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 P2ry10Q8BFU7 328 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Best2Q8BGM5 508 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Atg16l1Q8C0J2 607 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Sumf1Q8R0F3 372 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Olfr397Q8VEZ6 315 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Cul1Q9WTX6 776 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Syngap1F6SEU4 1340 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Smad1P70340 465 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Foxn3Q499D0 457 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Gm2163Q6PCY5 473 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Tdrd3Q91W18 743 aaKnown RBP11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Trim7Q923T7 510 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 EpgnQ924X1 152 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Fthl17aQ9DAX0 182 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Slc13a1Q9JHI4 594 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Stx1bP61264 288 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Mark3Q03141 753 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Psd3Q2PFD7 1037 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Wdr36Q3TAQ9 899 aaKnown RBP11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Ube2oQ6ZPJ3 1288 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Arhgap15Q811M1 481 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Suds3Q8BR65 328 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 PalmdQ9JHU2 551 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Stat2Q9WVL2 923 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Myom1Q62234 1667 aaKnown RBP11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 PtprmP28828 1452 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Gm3402K7N5P2 326 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Slc3a2P10852 526 aaKnown RBP11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Mettl17Q3U2U7 461 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Skap2Q3UND0 358 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Peg10Q7TN75 958 aaKnown RBP11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Zfp449Q8CB76 518 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Ints9Q8K114 658 aaKnown RBP11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 CenpkQ9ESN5 271 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 NfkbizQ9EST8 728 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Add1Q9QYC0 735 aaKnown RBP11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Tulp1Q9Z273 543 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Setbp1Q9Z180 1582 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Gm2237E9Q501 211 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Gm3591K7N6X2 186 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Magea6O89010 325 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Eno3P21550 434 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Magea3Q6T340 320 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Gm5926E9PWJ8 236 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 EsrraO08580 422 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Clcn6O35454 870 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Magea1O89006 320 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Magea5O89009 320 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Psmc5P62196 406 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 HelqQ2VPA6 1069 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Tatdn3Q3U1C6 294 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Tmtc1Q3UV71 942 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Pla2g4cQ64GA5 597 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 N4bp3Q8C7U1 537 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Adprhl2Q8CG72 370 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Trim59Q922Y2 403 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Abcg8Q9DBM0 673 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Tlr2Q9QUN7 784 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Magea2Q9R2A2 320 aa11.82□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Adamts13Q769J6 1426 aa11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Gbp6A0A0G2JDV3 611 aa11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Nmt1O70310 496 aaKnown RBP11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 BC051142Q3V0M8 400 aa11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Tmem134Q8R0J4 195 aa11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Fam81bA0A140LI28 432 aa11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Ccng2O08918 344 aa11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Nsun7Q14AW5 724 aa11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Rc3h1Q4VGL6 1130 aaKnown RBP11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Git1Q68FF6 770 aa11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Supt20hQ7TT00 530 aaKnown RBP11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Nkiras1Q8CEC5 192 aa11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Mis18aQ9CZJ6 204 aa11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Sgpp1Q9JI99 430 aa11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Zranb2Q9R020 330 aaKnown RBP11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Ankrd63A2ARS0 390 aa11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Pou6f1Q07916 301 aa11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Ifnl2Q4VK74 193 aa11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Sh3gl1Q62419 368 aa11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Hdac10Q6P3E7 666 aa11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 SybuQ8BHS8 665 aa11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Spata32Q8C5V0 334 aa11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 CoblQ5NBX1 1337 aaKnown RBP11.81□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Trpm1Q2TV84 1622 aa11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms