RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 FtoQ8BGW1 502 aa13.65□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Tmem117Q8BH18 514 aa13.65□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Me3Q8BMF3 604 aa13.65□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Arhgef19Q8BWA8 802 aa13.65□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Slc38a7Q8BWH0 463 aa13.65□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Rint1Q8BZ36 792 aa13.65□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Mrgprx1Q8CIP3 322 aa13.65□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Lmbrd1Q8K0B2 537 aa13.65□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Tdrd7Q8K1H1 1086 aaKnown RBP13.65□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 TraipQ8VIG6 470 aa13.65□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Bbox1Q924Y0 387 aa13.65□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Plagl2Q925T4 496 aa13.65□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 QpctQ9CYK2 362 aa13.65□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Cabp5Q9JLK3 173 aa13.65□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 CluhQ5SW19 1315 aa13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Map7d2A2AG50 781 aa13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Tbc1d2B1AVH7 922 aa13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Cyp26c1B2RXA7 518 aa13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Yme1l1O88967 715 aaKnown RBP13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Fmr1P35922 614 aaKnown RBP13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 TdgP56581 421 aa13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Bmp1P98063 991 aa13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Vwa3aQ3UVV9 1148 aa13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 P4ha1Q60715 534 aa13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Kiaa1841Q68FF0 718 aa13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Proser3Q7TSA6 634 aa13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Cyth4Q80YW0 393 aa13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Ercc6lQ8BHK9 1240 aa13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Ushbp1Q8R370 680 aa13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Ifih1Q8R5F7 1025 aa13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Gripap1Q8VD04 806 aa13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Ppp1r16bQ8VHQ3 568 aa13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Tube1Q9D6T1 475 aa13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Col4a3bpQ9EQG9 624 aa13.64□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Nup210lQ9D2F7 1881 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Cep295Q8BQ48 2412 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Gm11985A0A1B0GS61 206 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 FosbP13346 338 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Tnni3P48787 211 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Defa-rs12P50716 91 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Cplx1P63040 134 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Pkn1P70268 946 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Oas1fQ14AZ4 364 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Hexim2Q3TVI4 313 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 ItgaeQ60677 1167 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Fhod1Q6P9Q4 1197 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Smarca1Q6PGB8 1046 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 AarsQ8BGQ7 968 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Serpina3bQ8BYY9 420 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Csnk1g3Q8C4X2 424 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Prpf31Q8CCF0 499 aaKnown RBP13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Fam160b1Q8CDM8 764 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Stoml1Q8CI66 399 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Upb1Q8VC97 393 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Unc93b1Q8VCW4 598 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Zfp64Q99KE8 643 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 TheglQ9DA15 459 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Taf1Q80UV9 1891 aa13.63□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Gm43738A0A0G2JEA5 862 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Zfp472B0V2W5 534 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Vmn2r17E9PYF5 849 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Zfp882E9Q4R4 555 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Serpina1aP07758 413 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Camk4P08414 469 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Serpina1bP22599 413 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Serpina1cQ00896 412 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Serpina1dQ00897 413 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Asprv1Q09PK2 339 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Sppl2bQ3TD49 578 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Tatdn3Q3U1C6 294 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Nrg1Q6DR99 700 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Nudt16Q6P3D0 195 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Tmem220Q8BP07 167 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Nod2Q8K3Z0 1020 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Tspyl4Q8VD63 406 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Cep57l1Q8VDS7 400 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Atp6v0a4Q920R6 833 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Spdl1Q923A2 608 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Map4k3Q99JP0 894 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Dhx30Q99PU8 1217 aaKnown RBP13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Emc2Q9CRD2 297 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Nkx2-4Q9EQM3 354 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 B4galt4Q9JJ04 344 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Grb14Q9JLM9 538 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Fxr2Q9WVR4 673 aaKnown RBP13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Fam205aA2APU8 1308 aa13.62□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Ttll6A4Q9E8 822 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Vmn2r87E9PZX4 848 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 PtenO08586 403 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Xrcc6P23475 608 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Stat5aP42230 793 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 ArvcfP98203 962 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Ppp4r2Q0VGB7 417 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Pnpla5Q32LZ8 432 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 DhpsQ3TXU5 369 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Mier3Q3UHF3 551 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Slc2a13Q3UHK1 637 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Git1Q68FF6 770 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 KyQ8C8H8 661 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Ildr1Q8CBR1 537 aa13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms