RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Shcbp1Q9Z179 668 aa14.88□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Zscan12Q9Z1D7 501 aa14.88□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Unc13aQ4KUS2 1712 aa14.88□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Arhgef9Q3UTH8 516 aa14.88□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Ppp1r1bQ60829 194 aa14.88□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Ppp1r2Q9DCL8 206 aa14.88□□□□□ -0.03
Col3a1-201ENSMUST00000087883 FscbA1EGX6 1074 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 DtnbO70585 659 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 PtgdrP70263 357 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 4921524L21RikQ9D5T2 438 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 CsadQ9DBE0 493 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Cul3Q9JLV5 768 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Uggt2E9Q4X2 1504 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Cdc27A2A6Q5 825 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Trim72Q1XH17 477 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Znf12Q7TSI0 686 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Llgl1Q80Y17 1036 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Mb21d2Q8C525 428 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 CtsqQ91ZF4 343 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Smyd3Q9CWR2 428 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 PycardQ9EPB4 193 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Arhgef7Q9ES28 862 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Ccdc22Q9JIG7 627 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Lrrc63A6H694 637 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Pfkfb3A7UAK5 555 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Tlk2O55047 718 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 KitP05532 979 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 D1Pas1P16381 660 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Krt75Q8BGZ7 551 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Armc6Q8BNU0 468 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Trim52Q8CDV4 233 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Cdk8Q8R3L8 464 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Lrrc59Q922Q8 307 aaKnown RBP14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Txndc9Q9CQ79 226 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Rnf4Q9QZS2 194 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Zc3h4Q6ZPZ3 1304 aaKnown RBP14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Apol11bE9PUZ0 337 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Alppl2P24823 529 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Rassf9Q8K342 435 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 NonoQ99K48 473 aaKnown RBP14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Tlr3Q99MB1 905 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Vps33aQ9D2N9 598 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Drap1Q9D6N5 205 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Angptl2Q9R045 493 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Zfp839E9PUU5 921 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Akr1b10G5E895 316 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Atp9bP98195 1146 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Pla2g4cQ64GA5 597 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Tmem179Q8BHH9 233 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Tmem134Q8R0J4 195 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Foxp3Q99JB6 429 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Grk2Q99MK8 689 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Fmnl1Q9JL26 1094 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Bub1bQ9Z1S0 1052 aa14.87□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Gm45261A0A1B0GSP6 197 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Vmn2r23E9PXI5 849 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Slc7a1Q09143 622 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Skap1Q3UUV5 355 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Ptk6Q64434 451 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Defb15Q8R2I5 79 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 PudpQ9D5U5 234 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Fthl17aQ9DAX0 182 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 GgcxQ9QYC7 757 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Slc4a9E9PUP3 929 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 RnaselQ05921 735 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Gsdmc4Q3TR54 480 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Lrrc8eQ66JT1 795 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Ndufb9Q9CQJ8 179 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Sapcd2Q9D818 391 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Krt17Q9QWL7 433 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Abca16E9PWJ7 1678 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Olfr310B2RVZ1 332 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 GabrdP22933 449 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Scg2Q03517 617 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Slc7a14Q8BXR1 771 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Q8VDP2 222 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Ehd4Q9EQP2 541 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Plod1Q9R0E2 728 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Anapc7Q9WVM3 565 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Rims1Q99NE5 1463 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Eif4g3Q80XI3 1579 aaKnown RBP14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Grin2dQ03391 1323 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Osbpl9A2A8Z1 736 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Gm5795E9PZN8 263 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Kif23E9Q5G3 953 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Stag2O35638 1231 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Vipas39Q8BGQ1 491 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Haus7Q8BKT8 364 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Agr3Q8R3W7 165 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 IkbipQ9DBZ1 373 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Hic1Q9R1Y5 733 aa14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Fam208aQ69ZR9 1610 aaKnown RBP14.86□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Card9A2AIV8 536 aa14.85□□□□□ -0.03
Col3a1-201ENSMUST00000087883 RaraP11416 462 aa14.85□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Zbtb1Q91VL9 713 aa14.85□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Def8Q99J78 448 aa14.85□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Nsmce3Q9CPR8 279 aa14.85□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Atp11cQ9QZW0 1129 aa14.85□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Large1Q9Z1M7 756 aa14.85□□□□□ -0.03
Col3a1-201ENSMUST00000087883 Zfp212G3X8R7 492 aa14.85□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 47.3 ms