RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Alas2P08680 587 aa9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Nhlh1Q02576 133 aa9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Pcbp2Q61990 362 aaKnown RBP9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Znf512Q69Z99 562 aa9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Trim37Q6PCX9 961 aa9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Dnajc6Q80TZ3 938 aa9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Znf131Q8K3J5 619 aa9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Slc22a19Q8VCA0 551 aa9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Ndufs2Q91WD5 463 aa9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Rev1Q920Q2 1249 aa9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Barx1Q9ER42 254 aa9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Fzd9Q9R216 592 aa9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Mroh1E0CZ22 1640 aa9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Pik3c2gO70167 1506 aa9□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Med1Q925J9 1575 aa9□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Lmtk3Q5XJV6 1424 aa9□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Aldh1a7O35945 501 aa9□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Eno2P17183 434 aa9□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Dlx4P70436 240 aa9□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 BidP70444 195 aa9□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 4930480E11RikQ0VG34 394 aa9□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Ptpn14Q62130 1189 aa9□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Ift122Q6NWV3 1182 aa9□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Sit1Q8C503 180 aa9□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Spata32Q8C5V0 334 aa9□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Wnt9aQ8R5M2 365 aa9□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 TardbpQ921F2 414 aaKnown RBP9□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 DgkkE9Q7N4 1118 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Gm3371F7CQW8 167 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Apaf1O88879 1249 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 P01725 110 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Fcgr2P08101 330 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Dnmt3cP0DOY1 709 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 ProcP33587 460 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Tle3Q08122 772 aaKnown RBP8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Klrg2Q3UM83 387 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Nlrp9aQ66X03 949 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Adgrg6Q6F3F9 1165 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Epn1Q80VP1 575 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Olfml2aQ8BHP7 681 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Znf526Q8BI66 675 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 NgefQ8CHT1 710 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 PvrQ8K094 408 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Gspt1Q8R050 636 aaKnown RBP8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Irf2bp1Q8R3Y8 584 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Ankef1Q9D2J7 775 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Tas2r105Q9JKT4 300 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Sema7aQ9QUR8 664 aa8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Acin1Q9JIX8 1338 aaKnown RBP8.99□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Myom1Q62234 1667 aaKnown RBP8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 PzpQ61838 1495 aa8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Erich6D3Z6S9 713 aa8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Muc3E9PWP7 378 aa8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Hk2O08528 917 aaKnown RBP8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Itgb5O70309 798 aa8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 CtssO70370 340 aa8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 P01653 108 aa8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Foxb1Q64732 325 aa8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 KaznQ69ZS8 779 aa8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Scn4bQ7M729 228 aa8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Srgap3Q812A2 1099 aa8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Gabra5Q8BHJ7 463 aa8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 4930572O03RikQ8C5Y0 211 aa8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Prpf6Q91YR7 941 aaKnown RBP8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Cfap53Q9D439 514 aa8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Bag3Q9JLV1 577 aaKnown RBP8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Klra17Q9JMA4 273 aa8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Thsd7aQ69ZU6 1645 aa8.98□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Edc4Q3UJB9 1406 aaKnown RBP8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 ErbinQ80TH2 1402 aa8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Mpig6bD7PDD4 242 aa8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Pim1P06803 397 aa8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Ckmt1P30275 418 aaKnown RBP8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 ItgavP43406 1044 aa8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Gm1587Q3UT80 123 aa8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Carmil2Q3V3V9 1296 aa8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Fscn1Q61553 493 aa8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Ltv1Q6NSQ7 470 aaKnown RBP8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Txndc2Q6P902 515 aa8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Ppp2r5aQ6PD03 486 aa8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Smarcc2Q6PDG5 1213 aa8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Luc7l2Q7TNC4 392 aaKnown RBP8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Zswim6Q80TB7 1207 aa8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Mrps35Q8BJZ4 320 aaKnown RBP8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Cep95Q8BVV7 827 aa8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 SltmQ8CH25 1031 aaKnown RBP8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Slc27a4Q91VE0 643 aaKnown RBP8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Ncoa5Q91W39 579 aaKnown RBP8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Rtfdc1Q99K95 307 aa8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Arhgef28P97433 1693 aa8.97□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Prrc2bQ7TPM1 1486 aaKnown RBP8.96□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Pramef17A2ASJ1 475 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Gm10719E9Q7T3 227 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Rad51ap2G3UW63 976 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 E030030I06RikJ3QML9 246 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Gm11168J3QN50 228 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Tmprss15P97435 1069 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Rnf44Q3UHJ8 407 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 OclnQ61146 521 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Npdc1Q64322 332 aa8.96□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms