RNA–Protein interactions for RNA: ENSMUST00000057525.13

Trim3-201, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 3,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-201ENSMUST00000057525 Znf467Q8JZL0 594 aa16.73■□□□□ 0.27
Trim3-201ENSMUST00000057525 Tc2nQ91XT6 489 aa16.73■□□□□ 0.27
Trim3-201ENSMUST00000057525 Ccdc43Q9CR29 222 aaKnown RBP16.73■□□□□ 0.27
Trim3-201ENSMUST00000057525 PorcnQ9JJJ7 461 aa16.73■□□□□ 0.27
Trim3-201ENSMUST00000057525 Spint1Q9R097 507 aa16.73■□□□□ 0.27
Trim3-201ENSMUST00000057525 Krt28A6BLY7 462 aa16.73■□□□□ 0.27
Trim3-201ENSMUST00000057525 Sema4dO09126 861 aa16.73■□□□□ 0.27
Trim3-201ENSMUST00000057525 Cct6aP80317 531 aaKnown RBP16.73■□□□□ 0.27
Trim3-201ENSMUST00000057525 Mark2Q05512 776 aa16.73■□□□□ 0.27
Trim3-201ENSMUST00000057525 Clul1Q3ZRW6 464 aa16.73■□□□□ 0.27
Trim3-201ENSMUST00000057525 LppQ8BFW7 613 aa16.73■□□□□ 0.27
Trim3-201ENSMUST00000057525 Scyl2Q8CFE4 930 aa16.73■□□□□ 0.27
Trim3-201ENSMUST00000057525 Stoml1Q8CI66 399 aa16.73■□□□□ 0.27
Trim3-201ENSMUST00000057525 Xpo5Q924C1 1204 aaKnown RBP16.73■□□□□ 0.27
Trim3-201ENSMUST00000057525 Rtfdc1Q99K95 307 aa16.73■□□□□ 0.27
Trim3-201ENSMUST00000057525 Gm10378F6XQQ1 160 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Gna14P30677 355 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Ccr1P51675 355 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Tpm2P58774 284 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 DeptorQ570Y9 409 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Hook2Q7TMK6 716 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Arrdc3Q7TPQ9 414 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Amer1Q7TS75 1132 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Atp1a1Q8VDN2 1023 aaKnown RBP16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Fam111aQ9D2L9 613 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Olr1Q9EQ09 363 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Gm1993A6X8I0 212 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Apol6B7ZC55 329 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 SlxD3Z347 212 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Ap1b1O35643 943 aaKnown RBP16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Men1O88559 611 aaKnown RBP16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Hoxc6P10629 235 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 RaraP11416 462 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 AdssP46664 456 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Gtf2bP62915 316 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Acot6Q32Q92 419 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Mkrn3Q60764 544 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Krt31Q61765 416 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Usp6nlQ80XC3 819 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Mamdc2Q8CG85 686 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Celf3Q8CIN6 465 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Tcp11l2Q8K1H7 517 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Vmn1r191Q8K4D0 298 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Q9D2Q3 444 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Msgn1Q9JK54 188 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 1700016G14RikA0A286YCZ6 238 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Kcnh2O35219 1162 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Sptlc1O35704 473 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Tbx2Q60707 711 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Cdc37Q61081 379 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Dlg4Q62108 724 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Fam214aQ69ZK7 1075 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Prpf40bQ80W14 870 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Ankfy1Q810B6 1169 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Mei4Q8BRM6 389 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Rcor2Q8C796 523 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Olfr390Q8VEZ7 311 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Acot11Q8VHQ9 594 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Tmco4Q91WU4 631 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Pcdhgc5Q91XW9 944 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Tas1r3Q925D8 858 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 PrameQ9D4Z5 464 aa16.72■□□□□ 0.27
Trim3-201ENSMUST00000057525 Gm11985A0A1B0GS61 206 aa16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 TroapB7ZNG4 668 aa16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 Gjb1P28230 283 aa16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 MafP54843 370 aa16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 Wdr18Q4VBE8 431 aa16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 Tcaf3Q6QR59 914 aa16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 Slc7a6osQ7TPE5 306 aa16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 TbckQ8BM85 762 aa16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 Tmem161bQ8C2L6 487 aa16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 SucoQ8C341 1250 aa16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 GneQ91WG8 722 aaKnown RBP16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 Smyd3Q9CWR2 428 aa16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 Tekt1Q9DAJ2 418 aa16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 Ralgps2Q9ERD6 590 aa16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 Rpl13P47963 211 aaKnown RBP16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 Rhbdf1Q6PIX5 856 aa16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 Actn1Q7TPR4 892 aaKnown RBP16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 Fam49aQ8BHZ0 323 aa16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 Tmem87aQ8BXN9 555 aa16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 1700016D06RikQ9DAA5 166 aa16.71■□□□□ 0.27
Trim3-201ENSMUST00000057525 NfkbieO54910 364 aa16.7■□□□□ 0.26
Trim3-201ENSMUST00000057525 Cyp2f2P33267 491 aa16.7■□□□□ 0.26
Trim3-201ENSMUST00000057525 Tpm4Q6IRU2 248 aa16.7■□□□□ 0.26
Trim3-201ENSMUST00000057525 Sh3d21Q7TSG5 549 aa16.7■□□□□ 0.26
Trim3-201ENSMUST00000057525 Vps52Q8C754 723 aaKnown RBP16.7■□□□□ 0.26
Trim3-201ENSMUST00000057525 Oit3Q8R4V5 546 aa16.7■□□□□ 0.26
Trim3-201ENSMUST00000057525 Med15Q924H2 789 aa16.7■□□□□ 0.26
Trim3-201ENSMUST00000057525 Hspbp1Q99P31 357 aaKnown RBP16.7■□□□□ 0.26
Trim3-201ENSMUST00000057525 Tnfsf13bQ9WU72 309 aa16.7■□□□□ 0.26
Trim3-201ENSMUST00000057525 GmnnO88513 206 aa16.7■□□□□ 0.26
Trim3-201ENSMUST00000057525 Surf1P09925 306 aa16.7■□□□□ 0.26
Trim3-201ENSMUST00000057525 Mgat3Q10470 538 aa16.7■□□□□ 0.26
Trim3-201ENSMUST00000057525 Fscn2Q32M02 492 aa16.7■□□□□ 0.26
Trim3-201ENSMUST00000057525 Mindy4Q3UQI9 744 aa16.7■□□□□ 0.26
Trim3-201ENSMUST00000057525 Dnm3Q8BZ98 863 aa16.7■□□□□ 0.26
Trim3-201ENSMUST00000057525 Ccz1Q8C1Y8 480 aa16.7■□□□□ 0.26
Trim3-201ENSMUST00000057525 Pqbp1Q91VJ5 263 aaKnown RBP16.7■□□□□ 0.26
Trim3-201ENSMUST00000057525 Sdr42e1Q9D665 394 aa16.7■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms