RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Lrrc36Q3V0M2 755 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Dnajc8Q6NZB0 253 aaKnown RBP20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Riox2Q8CD15 465 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Fermt3Q8K1B8 665 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Uchl3Q9JKB1 230 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Magea2Q9R2A2 320 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Eif2ak1Q9Z2R9 619 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Mmrn1B2RPV6 1210 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Sclt1G5E861 688 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Stmn4P63042 189 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 SpertQ32MG2 446 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Meis1Q60954 390 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Foxd1Q61345 456 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Swap70Q6A028 585 aaKnown RBP20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Q8BGC1 442 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Dnm1lQ8K1M6 742 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Anapc4Q91W96 807 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Pdxdc1Q99K01 787 aaKnown RBP20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Abcf2Q99LE6 628 aaKnown RBP20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Net1Q9Z206 595 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Syngap1F6SEU4 1340 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Cacna2d1O08532 1103 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Cpsf2O35218 782 aaKnown RBP20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 AfpP02772 605 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 CalrP14211 416 aaKnown RBP20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Vcam1P29533 739 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Slc8a1P70414 970 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Meis2P97367 477 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Tex35Q14BK3 207 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Cyp2c67Q569X9 491 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Cnot7Q60809 285 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Kif5bQ61768 963 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Nucks1Q80XU3 234 aaKnown RBP20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Ccdc113Q8C5T8 377 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Tbc1d10cQ8C9V1 444 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Unc5bQ8K1S3 945 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Dennd1aQ8K382 1016 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Trpm8Q8R4D5 1104 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Q8VDP2 222 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Ranbp17Q99NF8 1088 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Ears2Q9CXJ1 523 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Zfy1P10925 782 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 HelqQ2VPA6 1069 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Ice2Q3UZ18 988 aaKnown RBP20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Glg1Q61543 1175 aaKnown RBP20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Armc6Q8BNU0 468 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Synpo2Q91YE8 1087 aaKnown RBP20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Drap1Q9D6N5 205 aa20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 SmapQ9R0P4 181 aaKnown RBP20.61■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Abi2P62484 446 aa20.6■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Slc5a5Q99PN0 618 aa20.6■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Galnt15Q9D2N8 638 aa20.6■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Exoc4O35382 975 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Tp53P02340 387 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Cep126Q0VBV7 1103 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Ppp2r5aQ6PD03 486 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 HhatQ8BMT9 499 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Dph5Q9CWQ0 281 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Stk4Q9JI11 487 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Nfs1Q9Z1J3 459 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Scn9aQ62205 1984 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Osbpl7A2A716 963 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Magea6O89010 325 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Wdr70Q3TWF6 657 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Phactr4Q501J7 694 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Tm4sf1Q64302 202 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Best3Q6H1V1 669 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Ttyh3Q6P5F7 524 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Magea3Q6T340 320 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Aldh5a1Q8BWF0 523 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Vps52Q8C754 723 aaKnown RBP20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Pkn3Q8K045 878 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Bhmt2Q91WS4 363 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Cep19Q9CQA8 163 aa20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Cdc42ep4Q9JM96 349 aaKnown RBP20.59■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Myh10Q61879 1976 aaKnown RBP20.58■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Lrrc74aA0A1Y7VMD6 494 aa20.58■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Apba1B2RUJ5 842 aa20.58■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 EporP14753 507 aa20.58■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Ccdc92bQ5SUE3 299 aa20.58■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Slc17a8Q8BFU8 601 aa20.58■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Ttc5Q99LG4 440 aa20.58■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 IkbipQ9DBZ1 373 aa20.58■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Gtf2iQ9ESZ8 998 aaKnown RBP20.58■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Slc35g2D3YVE8 412 aa20.58■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Casq2O09161 415 aa20.58■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Klhdc9Q3USL1 350 aa20.58■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Akap4Q60662 849 aa20.58■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Zbed4Q80WQ9 1168 aa20.58■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 L3mbtl3Q8BLB7 883 aa20.58■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Efl1Q8C0D5 1127 aa20.58■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Ciapin1Q8WTY4 309 aa20.58■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Acsl3Q9CZW4 720 aaKnown RBP20.58■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 PlekQ9JHK5 350 aaKnown RBP20.58■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Mybl2P48972 704 aa20.57■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Pon1P52430 355 aa20.57■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Edem3Q2HXL6 931 aa20.57■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Klrg2Q3UM83 387 aa20.57■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Vav2Q60992 868 aa20.57■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Nr2e1Q64104 385 aa20.57■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms