RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Trim7Q923T7 510 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Nuf2Q99P69 463 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Rhobtb3Q9CTN4 611 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Med10Q9CXU0 135 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Bcs1lQ9CZP5 418 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Rbm31yQ9D3U4 565 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Twf2Q9Z0P5 349 aaKnown RBP10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Gm21962L7N280 338 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Aoc3O70423 765 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 SfnO70456 248 aaKnown RBP10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Tnnc2P20801 160 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Cyp2d10P24456 504 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Nub1P54729 614 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Snap25P60879 206 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Nsun2Q1HFZ0 757 aaKnown RBP10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Serpinb6dQ3UWK8 375 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Atg16l1Q8C0J2 607 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Dclre1bQ8C7W7 541 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Cep57Q8CEE0 500 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Atxn7Q8R4I1 867 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Psmg1Q9JK23 289 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Gm7168A0AUV4 508 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Osbpl9A2A8Z1 736 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Slc39a2G3X943 309 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Zfp408H7BX78 710 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 RaraP11416 462 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Fgl2P12804 432 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Chp1P61022 195 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Tll1Q62381 1013 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Ahcyl2Q68FL4 613 aaKnown RBP10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Klhl14Q69ZK5 630 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 NfrkbQ6PIJ4 1296 aaKnown RBP10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Arhgap10Q6Y5D8 786 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Q8K2W9 541 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Inpp5bQ8K337 993 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Setd6Q9CWY3 473 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Pramef12Q9D2F1 463 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Myo1hQ9D6A1 958 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Mad2l2Q9D752 211 aa10.64□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Ect2Q07139 913 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Gm3414Q3TNU4 584 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Sec31aQ3UPL0 1230 aaKnown RBP10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Tmtc1Q3UV71 942 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 RbsnQ80Y56 783 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Psmd5Q8BJY1 504 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Q8C1R3 189 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Apol9bQ8C7I4 310 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Mettl24Q8CCB5 363 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Nkiras1Q8CEC5 192 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Pdik1lQ8QZR7 341 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Apol9aQ8VDU3 310 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Sh3bp5lQ99LH9 392 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Tex9Q9D845 387 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 MrgbpQ9DAT2 204 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Strn3Q9ERG2 796 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Plcg1Q62077 1302 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Bend4P86174 541 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Nell2Q61220 819 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Ces5aQ6AW46 575 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Peg10Q7TN75 958 aaKnown RBP10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Pja2Q80U04 707 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Trim9Q8C7M3 817 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 DpydQ8CHR6 1025 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Prkag2Q91WG5 566 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Psmd6Q99JI4 389 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 St13Q99L47 371 aaKnown RBP10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Sgk1Q9WVC6 431 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Apba1B2RUJ5 842 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 HpdP49429 393 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Ubxn2bQ0KL01 331 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Spata5Q3UMC0 893 aaKnown RBP10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Tmed1Q3V009 227 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Spag6Q3V0U9 509 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Nt5c2Q3V1L4 560 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Sco1Q5SUC9 284 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Serpinb6Q60854 378 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 DaglaQ6WQJ1 1044 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Smg5Q6ZPY2 1017 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Q80ZQ3 298 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 CtsqQ91ZF4 343 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Nek8Q91ZR4 698 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 MlxiplQ99MZ3 864 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Eif2ak1Q9Z2R9 619 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Kcnq2Q9Z351 759 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Serpinb6cW4VSP4 379 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 SynrgQ5SV85 1306 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 CpdO89001 1377 aa10.63□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Syt2P46097 422 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 WhrnQ80VW5 918 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 BC048507Q80ZS7 89 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Cabcoco1Q8CDT7 208 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Nrbf2Q8VCQ3 287 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Adgrf5G5E8Q8 1348 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Rsrc2A2RTL5 376 aaKnown RBP10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Gm382B1AXN3 1250 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 TxkP42682 527 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Tmod1P49813 359 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Rc3h1Q4VGL6 1130 aaKnown RBP10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Fxr1Q61584 677 aaKnown RBP10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Npdc1Q64322 332 aa10.62□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms