RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Q8C1R3 189 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Trappc12Q8K2L8 797 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 BrdtQ91Y44 956 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Hspbp1Q99P31 357 aaKnown RBP9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tmco5aQ9D9D5 303 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 IdeQ9JHR7 1019 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 BcamQ9R069 622 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Cfap221A9Q751 836 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 EporP14753 507 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Wfs1P56695 890 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 AaasP58742 546 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Kcnma1Q08460 1209 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tfdp1Q08639 410 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Prr7Q3V0I2 269 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 AsphQ8BSY0 741 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Vmn1r199Q8R280 367 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Zcchc18Q8VD24 393 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Cbx8Q9QXV1 362 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Hebp1Q9R257 190 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Scn11aQ9R053 1765 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ephb4P54761 987 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Acot6Q32Q92 419 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Fam53cQ8BXQ8 393 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Uap1Q91YN5 522 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 MafgO54790 162 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 TxkP42682 527 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Psmc6P62334 389 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Taok1Q5F2E8 1001 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Fbxo10Q7TQF2 950 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Pcdhb12Q91Y07 789 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tmem132aQ922P8 1018 aa9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Prpf4Q9DAW6 521 aaKnown RBP9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Dkc1Q9ESX5 509 aaKnown RBP9.15□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Myh4Q5SX39 1939 aa9.15□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 4933406M09RikG3XA12 479 aa9.15□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 YdjcQ14BV6 310 aa9.15□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gxylt1Q3UHH8 404 aa9.15□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Kcnk18Q6VV64 394 aa9.15□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ttc7aQ8BGB2 858 aa9.15□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Chtf18Q8BIW9 969 aa9.15□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 HhatQ8BMT9 499 aa9.15□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gpr180Q8BPS4 441 aa9.15□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Tldc1Q8K0P3 455 aa9.15□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Rbm31yQ9D3U4 565 aa9.15□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Cog1Q9Z160 980 aa9.15□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Nhsl1Q8CAF4 1587 aa9.15□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Apol11aE9PZG0 334 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Sema4dO09126 861 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Slc1a1P51906 523 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Psmd1Q3TXS7 953 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Agxt2Q3UEG6 513 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ptger2Q62053 362 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Pla2g4cQ64GA5 597 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Btbd7Q8CFE5 1130 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Trim60Q8VI40 466 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Osbpl7A2A716 963 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Krt8P11679 490 aaKnown RBP9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 SarsP26638 512 aaKnown RBP9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Mybl1P51960 751 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Cracr2aQ3UP38 310 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Znf280dQ68FE8 974 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Tlr11Q6R5P0 926 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Impg2Q80XH2 1243 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Leng8Q8CBY3 785 aaKnown RBP9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Shtn1Q8K2Q9 631 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Rfc4Q99J62 364 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 ToporslQ9D2F8 683 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Jag1Q9QXX0 1218 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Slc12a7Q9WVL3 1083 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Sec14l1A8Y5H7 715 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Sez6lQ6P1D5 963 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Fsd1lQ8BYN5 507 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Prl7b1Q8CGZ9 251 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Vta1Q9CR26 309 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Prl2c2P04095 224 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Tnnc2P20801 160 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Actn4P57780 912 aaKnown RBP9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Rbm46P86049 533 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ptgs2Q05769 604 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Eepd1Q3TGW2 569 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ccdc92bQ5SUE3 299 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Trim21Q62191 470 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Fermt3Q8K1B8 665 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Tnfrsf10bQ9QZM4 381 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Kat6bQ8BRB7 1872 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gm11549A0A286YD83 63 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Bfsp1A2AMT1 669 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Speer2E9Q9U2 264 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 ArP19091 899 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Nek5Q7TSC3 627 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Vgll2Q8BGW8 322 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Usp38Q8BW70 1042 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ap3m2Q8R2R9 418 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Olfr805Q8VFI4 319 aa9.14□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 ItgaeQ60677 1167 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Lrrc1Q80VQ1 524 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Dars2Q8BIP0 653 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Plagl1Q9JLQ4 704 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Trpc5Q9QX29 975 aa9.13□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Hs6st3Q9QYK4 470 aa9.13□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms