RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Tas2r134Q7TQB0 298 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Dusp19Q8K4T5 220 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 FignQ9ERZ6 759 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 PlekQ9JHK5 350 aaKnown RBP17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Tsc2Q61037 1814 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Osbpl9A2A8Z1 736 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Lmnb2P21619 596 aaKnown RBP17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Hspa9P38647 679 aaKnown RBP17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 YdjcQ14BV6 310 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 MyrflQ3UN70 904 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 E2f5Q61502 335 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Lrrcc1Q69ZB0 1026 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 AdalQ80SY6 360 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Cep104Q80V31 926 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Unc5bQ8K1S3 945 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Inpp4aQ9EPW0 939 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Znf354bQ9QXT9 601 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Got1P05201 413 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Jdp2P97875 163 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Cep126Q0VBV7 1103 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Mier3Q3UHF3 551 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Abl2Q4JIM5 1182 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Pnma5Q5DTT8 618 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Appl2Q8K3G9 662 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Drap1Q9D6N5 205 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Snx1Q9WV80 522 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Cntnap1O54991 1385 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 SlmapQ3URD3 845 aa17.54■□□□□ 0.4
Trim28-201ENSMUST00000005705 Tbc1d1Q60949 1255 aa17.54■□□□□ 0.4
Trim28-201ENSMUST00000005705 SpidrQ8BGX7 933 aa17.54■□□□□ 0.4
Trim28-201ENSMUST00000005705 Lrrc14Q8VC16 493 aa17.54■□□□□ 0.4
Trim28-201ENSMUST00000005705 Iqcj-Schip1A0A088MLT8 559 aa17.54■□□□□ 0.4
Trim28-201ENSMUST00000005705 Mroh8E9PYI4 1049 aa17.54■□□□□ 0.4
Trim28-201ENSMUST00000005705 Krt18P05784 423 aa17.54■□□□□ 0.4
Trim28-201ENSMUST00000005705 Chmp6P0C0A3 200 aa17.54■□□□□ 0.4
Trim28-201ENSMUST00000005705 H2afzP0C0S6 128 aa17.54■□□□□ 0.4
Trim28-201ENSMUST00000005705 Schip1P0DPB4 484 aa17.54■□□□□ 0.4
Trim28-201ENSMUST00000005705 Krt19P19001 403 aa17.54■□□□□ 0.4
Trim28-201ENSMUST00000005705 Serpina1bP22599 413 aa17.54■□□□□ 0.4
Trim28-201ENSMUST00000005705 Sox10Q04888 466 aa17.54■□□□□ 0.4
Trim28-201ENSMUST00000005705 H2afvQ3THW5 128 aa17.54■□□□□ 0.4
Trim28-201ENSMUST00000005705 Krt12Q64291 487 aa17.54■□□□□ 0.4
Trim28-201ENSMUST00000005705 Ctnnbl1Q9CWL8 563 aaKnown RBP17.54■□□□□ 0.4
Trim28-201ENSMUST00000005705 Bcs1lQ9CZP5 418 aa17.54■□□□□ 0.4
Trim28-201ENSMUST00000005705 Sertad2Q9JJG5 309 aa17.54■□□□□ 0.4
Trim28-201ENSMUST00000005705 Xlr3bQ6P205 226 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Stambpl1Q76N33 436 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Ago4Q8CJF8 861 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Cpa5Q8R4H4 436 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Ranbp17Q99NF8 1088 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Atp6v1e2Q9D593 226 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Usp31E9Q6Y8 1344 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Atp2c2A7L9Z8 944 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 ArP19091 899 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Vcam1P29533 739 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Mybl2P48972 704 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Psg29Q3URN6 468 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Pcsk7Q61139 770 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 WaplQ65Z40 1200 aaKnown RBP17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Gimap4Q99JY3 219 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Zbed3Q9D0L1 228 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Armc9Q9D2I5 817 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Cmtm5Q9D6G9 156 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Tlr9Q9EQU3 1032 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Hebp1Q9R257 190 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Q3TTJ4 293 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Tom1l2Q5SRX1 507 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 GnptabQ69ZN6 1235 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Best3Q6H1V1 669 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Naa25Q8BWZ3 972 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Bud13Q8R149 637 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Tex19.1Q99MV2 351 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 PpihQ9D868 188 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Mzb1Q9D8I1 188 aa17.53■□□□□ 0.4
Trim28-201ENSMUST00000005705 Map7d1A2AJI0 846 aa17.52■□□□□ 0.4
Trim28-201ENSMUST00000005705 Sclt1G5E861 688 aa17.52■□□□□ 0.4
Trim28-201ENSMUST00000005705 Mdm4O35618 489 aa17.52■□□□□ 0.4
Trim28-201ENSMUST00000005705 Pcdha4O88689 947 aa17.52■□□□□ 0.4
Trim28-201ENSMUST00000005705 Zbtb7bQ64321 544 aa17.52■□□□□ 0.4
Trim28-201ENSMUST00000005705 Gramd4Q8CB44 633 aa17.52■□□□□ 0.4
Trim28-201ENSMUST00000005705 Col11a2Q64739 1736 aa17.52■□□□□ 0.4
Trim28-201ENSMUST00000005705 TicrrQ8BQ33 1889 aa17.52■□□□□ 0.4
Trim28-201ENSMUST00000005705 Trappc3O55013 180 aa17.52■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ccdc84Q4VA36 332 aaKnown RBP17.52■□□□□ 0.39
Trim28-201ENSMUST00000005705 Scarf1Q5ND28 820 aa17.52■□□□□ 0.39
Trim28-201ENSMUST00000005705 AarsQ8BGQ7 968 aa17.52■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ccdc113Q8C5T8 377 aa17.52■□□□□ 0.39
Trim28-201ENSMUST00000005705 Usp29Q9ES63 869 aa17.52■□□□□ 0.39
Trim28-201ENSMUST00000005705 Fam198bQ3UPI1 517 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Foxd4Q60688 444 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Gas7Q60780 421 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Kcnt1Q6ZPR4 1224 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Stk4Q9JI11 487 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Cyp2ab1S4R196 498 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Slc16a2O70324 545 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Psmd1Q3TXS7 953 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Atp2b4Q6Q477 1205 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ces4aQ8R0W5 563 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Slc12a6Q924N4 1150 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 CactinQ9CS00 772 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms