RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W NBL1Q3E7Y6 73 aa1.53□□□□□ -2.16
CTF4YPR135W MTR10Q99189 972 aa1.53□□□□□ -2.16
CTF4YPR135W YPR089WO13585 888 aa1.53□□□□□ -2.16
CTF4YPR135W GAL3P13045 520 aa1.53□□□□□ -2.16
CTF4YPR135W ALG1P16661 449 aa1.53□□□□□ -2.16
CTF4YPR135W CDC42P19073 191 aa1.53□□□□□ -2.16
CTF4YPR135W NTG1P31378 399 aa1.53□□□□□ -2.16
CTF4YPR135W DPH5P32469 300 aaPredicted RBP1.53□□□□□ -2.16
CTF4YPR135W GSH1P32477 678 aa1.53□□□□□ -2.16
CTF4YPR135W ADE17P38009 592 aaKnown RBP1.53□□□□□ -2.16
CTF4YPR135W STN1P38960 494 aa1.53□□□□□ -2.16
CTF4YPR135W DHH1P39517 506 aaKnown RBP1.53□□□□□ -2.16
CTF4YPR135W MBB1P39534 108 aa1.53□□□□□ -2.16
CTF4YPR135W YIL086CP40503 102 aa1.53□□□□□ -2.16
CTF4YPR135W SNO3P43544 222 aa1.53□□□□□ -2.16
CTF4YPR135W ATG27P46989 271 aa1.53□□□□□ -2.16
CTF4YPR135W RPA34P47006 233 aaPredicted RBP1.53□□□□□ -2.16
CTF4YPR135W ZRG17P53735 605 aa1.53□□□□□ -2.16
CTF4YPR135W SPO19Q03029 223 aa1.53□□□□□ -2.16
CTF4YPR135W YPR078CQ06813 372 aa1.53□□□□□ -2.16
CTF4YPR135W POS5Q06892 414 aa1.53□□□□□ -2.16
CTF4YPR135W ABP140Q08641 628 aaKnown RBP1.53□□□□□ -2.16
CTF4YPR135W RSA1Q08932 381 aa1.53□□□□□ -2.16
CTF4YPR135W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
CTF4YPR135W RBD2Q12270 262 aa1.53□□□□□ -2.16
CTF4YPR135W CDC37P06101 506 aaKnown RBP1.53□□□□□ -2.17
CTF4YPR135W COR1P07256 457 aa1.53□□□□□ -2.17
CTF4YPR135W PEP4P07267 405 aaKnown RBP1.53□□□□□ -2.17
CTF4YPR135W PUT2P07275 575 aa1.53□□□□□ -2.17
CTF4YPR135W AQY1P0CD91 305 aa1.53□□□□□ -2.17
CTF4YPR135W MEK1P24719 497 aaPredicted RBP1.53□□□□□ -2.17
CTF4YPR135W RRT12P25381 491 aa1.53□□□□□ -2.17
CTF4YPR135W PTC6P25646 442 aa1.53□□□□□ -2.17
CTF4YPR135W RIM1P32445 135 aaKnown RBP1.53□□□□□ -2.17
CTF4YPR135W ATO2P32907 282 aa1.53□□□□□ -2.17
CTF4YPR135W SKN1P33336 771 aa1.53□□□□□ -2.17
CTF4YPR135W KKQ8P36004 724 aa1.53□□□□□ -2.17
CTF4YPR135W MAL32P38158 584 aa1.53□□□□□ -2.17
CTF4YPR135W SPP381P38282 291 aaPredicted RBP1.53□□□□□ -2.17
CTF4YPR135W BZZ1P38822 633 aa1.53□□□□□ -2.17
CTF4YPR135W PHM8P40025 321 aa1.53□□□□□ -2.17
CTF4YPR135W FAR3P46671 204 aa1.53□□□□□ -2.17
CTF4YPR135W KEL2P50090 882 aa1.53□□□□□ -2.17
CTF4YPR135W YPR003CP53394 754 aa1.53□□□□□ -2.17
CTF4YPR135W SNT309Q06091 175 aaPredicted RBP1.53□□□□□ -2.17
CTF4YPR135W BOP2Q06150 570 aa1.53□□□□□ -2.17
CTF4YPR135W VAC14Q06708 880 aa1.53□□□□□ -2.17
CTF4YPR135W AKR2Q12013 749 aa1.53□□□□□ -2.17
CTF4YPR135W PEX11Q12462 236 aa1.53□□□□□ -2.17
CTF4YPR135W NFT1P0CE68 1218 aa1.52□□□□□ -2.17
CTF4YPR135W MER1P16523 270 aa1.52□□□□□ -2.17
CTF4YPR135W UGA1P17649 471 aa1.52□□□□□ -2.17
CTF4YPR135W PMA2P19657 947 aa1.52□□□□□ -2.17
CTF4YPR135W YAP1P19880 650 aaKnown RBP1.52□□□□□ -2.17
CTF4YPR135W ASF2P32448 525 aaPredicted RBP1.52□□□□□ -2.17
CTF4YPR135W MNL1P38888 796 aa1.52□□□□□ -2.17
CTF4YPR135W CCT2P39076 527 aaKnown RBP1.52□□□□□ -2.17
CTF4YPR135W URB2P47108 1174 aa1.52□□□□□ -2.17
CTF4YPR135W GTO1P48239 356 aa1.52□□□□□ -2.17
CTF4YPR135W UBP8P50102 471 aa1.52□□□□□ -2.17
CTF4YPR135W MND1P53102 219 aa1.52□□□□□ -2.17
CTF4YPR135W SWC4P53201 476 aa1.52□□□□□ -2.17
CTF4YPR135W YTP1P53584 459 aa1.52□□□□□ -2.17
CTF4YPR135W YMR102CQ03177 834 aa1.52□□□□□ -2.17
CTF4YPR135W NUP53Q03790 475 aa1.52□□□□□ -2.17
CTF4YPR135W ERV41Q04651 352 aa1.52□□□□□ -2.17
CTF4YPR135W ATG38Q05789 226 aaKnown RBP1.52□□□□□ -2.17
CTF4YPR135W FAR10Q06001 478 aa1.52□□□□□ -2.17
CTF4YPR135W YPR114WQ06107 315 aa1.52□□□□□ -2.17
CTF4YPR135W PFA4Q12006 378 aa1.52□□□□□ -2.17
CTF4YPR135W RUD3Q12234 484 aaKnown RBP1.52□□□□□ -2.17
CTF4YPR135W AIM45Q12480 344 aaKnown RBP1.52□□□□□ -2.17
CTF4YPR135W YER145C-AA0A023PYF4 145 aa1.52□□□□□ -2.17
CTF4YPR135W JIP3O13555 125 aa1.52□□□□□ -2.17
CTF4YPR135W PMR1P13586 950 aa1.52□□□□□ -2.17
CTF4YPR135W SRV2P17555 526 aaKnown RBP1.52□□□□□ -2.17
CTF4YPR135W ISY1P21374 235 aaPredicted RBP1.52□□□□□ -2.17
CTF4YPR135W MRPL8P22353 238 aa1.52□□□□□ -2.17
CTF4YPR135W URE2P23202 354 aaKnown RBP1.52□□□□□ -2.17
CTF4YPR135W PET18P25362 215 aa1.52□□□□□ -2.17
CTF4YPR135W PRS1P32895 427 aaKnown RBP1.52□□□□□ -2.17
CTF4YPR135W IMP3P32899 183 aaPredicted RBP1.52□□□□□ -2.17
CTF4YPR135W MTR2P34232 184 aaKnown RBP1.52□□□□□ -2.17
CTF4YPR135W IML3P38265 245 aa1.52□□□□□ -2.17
CTF4YPR135W SWC5P38326 303 aa1.52□□□□□ -2.17
CTF4YPR135W MMS21P38632 267 aa1.52□□□□□ -2.17
CTF4YPR135W RRP4P38792 359 aaKnown RBP1.52□□□□□ -2.17
CTF4YPR135W SBE22P38814 852 aa1.52□□□□□ -2.17
CTF4YPR135W AIM10P39965 576 aaKnown RBP1.52□□□□□ -2.17
CTF4YPR135W YFL015CP43578 164 aa1.52□□□□□ -2.17
CTF4YPR135W YGR127WP53275 312 aa1.52□□□□□ -2.17
CTF4YPR135W MPP6P53725 186 aaPredicted RBP1.52□□□□□ -2.17
CTF4YPR135W CAB5Q03941 241 aa1.52□□□□□ -2.17
CTF4YPR135W URC2Q04411 772 aa1.52□□□□□ -2.17
CTF4YPR135W RAD34Q06665 692 aa1.52□□□□□ -2.17
CTF4YPR135W IPK1Q06667 281 aa1.52□□□□□ -2.17
CTF4YPR135W CRC1Q12289 327 aa1.52□□□□□ -2.17
CTF4YPR135W Q0297Q9ZZV8 51 aa1.52□□□□□ -2.17
CTF4YPR135W CYR1P08678 2026 aaKnown RBP1.52□□□□□ -2.17
CTF4YPR135W RPS16AP0CX51 143 aaKnown RBP1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms