RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPN1	YPR133C	TUL1	P36096	758 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	ETR1	P38071	380 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	REV7	P38927	245 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	CCT2	P39076	527 aa	Known RBP	3.86	□□□□□ -1.79
SPN1	YPR133C	YNL195C	P40168	261 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	YJL068C	P40363	299 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	YIL001W	P40560	513 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	MNN5	P46982	586 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	BIT61	P47041	543 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	MPS3	P47069	682 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	APT1	P49435	187 aa	Known RBP	3.86	□□□□□ -1.79
SPN1	YPR133C	EFM5	P53200	248 aa	Known RBP	3.86	□□□□□ -1.79
SPN1	YPR133C	MTL1	P53214	551 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	YGR079W	P53249	370 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	EFR3	Q03653	782 aa	Known RBP	3.86	□□□□□ -1.79
SPN1	YPR133C	MIX14	Q04341	121 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	YLR345W	Q06137	509 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	YET3	Q07451	203 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	ESA1	Q08649	445 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	RSA1	Q08932	381 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	NMD4	Q12129	218 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	YCL012C	Q8J0M4	134 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	YOS9	Q99220	542 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	YOR019W	Q99248	730 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	Q0144	Q9ZZW2	109 aa		3.86	□□□□□ -1.79
SPN1	YPR133C	STE7	P06784	515 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	RPL20A	P0CX23	172 aa	Known RBP	3.85	□□□□□ -1.79
SPN1	YPR133C	RPL20B	P0CX24	172 aa	Predicted RBP	3.85	□□□□□ -1.79
SPN1	YPR133C	SLM5	P25345	492 aa	Known RBP	3.85	□□□□□ -1.79
SPN1	YPR133C	OCA4	P25366	362 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	YCR090C	P25654	182 aa	Known RBP	3.85	□□□□□ -1.79
SPN1	YPR133C	UBC6	P33296	250 aa	Predicted RBP	3.85	□□□□□ -1.79
SPN1	YPR133C	SNU114	P36048	1008 aa	Known RBP	3.85	□□□□□ -1.79
SPN1	YPR133C	CDS1	P38221	457 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	TDP1	P38319	544 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	YMR262W	P38430	313 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	YGP1	P38616	354 aa	Known RBP	3.85	□□□□□ -1.79
SPN1	YPR133C	PSD1	P39006	500 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	YIL166C	P40445	542 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	YIL067C	P40514	678 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	GCD10	P41814	478 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	YNL320W	P42840	284 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	PGU1	P47180	361 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	GPI8	P49018	411 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	MPA43	P53583	542 aa	Predicted RBP	3.85	□□□□□ -1.79
SPN1	YPR133C	YNL140C	P53910	189 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	YPL107W	Q02873	248 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	MSC1	Q03104	513 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	YML122C	Q03207	126 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	YML119W	Q03208	357 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	VTI1	Q04338	217 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	BUD22	Q04347	519 aa	Known RBP	3.85	□□□□□ -1.79
SPN1	YPR133C	PLM2	Q04383	521 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	FAR10	Q06001	478 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	SEI1	Q06058	285 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	YPL191C	Q08930	360 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	AHA1	Q12449	350 aa	Known RBP	3.85	□□□□□ -1.79
SPN1	YPR133C	RRP36	Q12481	300 aa	Predicted RBP	3.85	□□□□□ -1.79
SPN1	YPR133C	NOP58	Q12499	511 aa	Known RBP	3.85	□□□□□ -1.79
SPN1	YPR133C	RGS2	Q99188	309 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	MTR10	Q99189	972 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	Q0297	Q9ZZV8	51 aa		3.85	□□□□□ -1.79
SPN1	YPR133C	SIR3	P06701	978 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	PET122	P10355	254 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	IDH2	P28241	369 aa	Known RBP	3.84	□□□□□ -1.79
SPN1	YPR133C	COX13	P32799	129 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	RPS1A	P33442	255 aa	Known RBP	3.84	□□□□□ -1.79
SPN1	YPR133C	MSN2	P33748	704 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	MNN2	P38069	597 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	FES1	P38260	290 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	TRR2	P38816	342 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.84	□□□□□ -1.79	not detected
SPN1	YPR133C	COA1	P40452	197 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	INA22	P40576	216 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	APS3	P47064	194 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	YPT32	P51996	222 aa	Known RBP	3.84	□□□□□ -1.79
SPN1	YPR133C	COX18	P53239	316 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	YLR460C	P54007	376 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	CIK1	Q01649	594 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	RNY1	Q02933	434 aa	Known RBP	3.84	□□□□□ -1.79
SPN1	YPR133C	YMR209C	Q03648	457 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	SWF1	Q04629	336 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	YLR446W	Q06204	433 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	YPR172W	Q06608	200 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	AIM6	Q07716	390 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	YLL007C	Q07799	665 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	YOR365C	Q08844	703 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	ISA2	Q12425	185 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	YKL033W-A	Q86ZR7	236 aa		3.84	□□□□□ -1.79
SPN1	YPR133C	CDC36	P06100	191 aa	Predicted RBP	3.83	□□□□□ -1.8
SPN1	YPR133C	ERD1	P16151	362 aa		3.83	□□□□□ -1.8
SPN1	YPR133C	RPI1	P23250	407 aa	Known RBP	3.83	□□□□□ -1.8
SPN1	YPR133C	PHA2	P32452	334 aa		3.83	□□□□□ -1.8
SPN1	YPR133C	LOT5	P34234	306 aa		3.83	□□□□□ -1.8
SPN1	YPR133C	VPS21	P36017	210 aa	Known RBP	3.83	□□□□□ -1.8
SPN1	YPR133C	TPO5	P36029	618 aa		3.83	□□□□□ -1.8
SPN1	YPR133C	VPS51	P36116	164 aa		3.83	□□□□□ -1.8
SPN1	YPR133C	GLG1	P36143	616 aa		3.83	□□□□□ -1.8
SPN1	YPR133C	BZZ1	P38822	633 aa		3.83	□□□□□ -1.8
SPN1	YPR133C	PTH1	P38876	190 aa	Known RBP	3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms