RNA–Protein interactions for RNA: YPR111W

DBF20, Transcript of Ser/Thr kinase involved in late nuclear division, yeast

Gene DBF20, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF20	YPR111W	RBK1	P25332	333 aa		2.54	□□□□□ -2
DBF20	YPR111W	MXR2	P25566	168 aa		2.54	□□□□□ -2
DBF20	YPR111W	RAD5	P32849	1169 aa	Predicted RBP	2.54	□□□□□ -2
DBF20	YPR111W	BUD2	P33314	1104 aa		2.54	□□□□□ -2
DBF20	YPR111W	YOX1	P34161	385 aa		2.54	□□□□□ -2
DBF20	YPR111W	YHR182W	P38870	785 aa		2.54	□□□□□ -2
DBF20	YPR111W	GCN20	P43535	752 aa	Known RBP	2.54	□□□□□ -2
DBF20	YPR111W	LST7	P53237	242 aa		2.54	□□□□□ -2
DBF20	YPR111W	COS1	P53822	381 aa		2.54	□□□□□ -2
DBF20	YPR111W	CCE1	Q03702	353 aa		2.54	□□□□□ -2
DBF20	YPR111W	YMR027W	Q04371	470 aa		2.54	□□□□□ -2
DBF20	YPR111W	YOR387C	Q08910	206 aa		2.54	□□□□□ -2
DBF20	YPR111W	SPO24	Q3E752	67 aa		2.54	□□□□□ -2
DBF20	YPR111W	CAR2	P07991	424 aa	Known RBP	2.53	□□□□□ -2
DBF20	YPR111W	SSC1	P0CS90	654 aa	Known RBP	2.53	□□□□□ -2
DBF20	YPR111W	RPB5	P20434	215 aa		2.53	□□□□□ -2
DBF20	YPR111W	CPR4	P25334	318 aa		2.53	□□□□□ -2
DBF20	YPR111W	ZUO1	P32527	433 aa	Known RBP	2.53	□□□□□ -2
DBF20	YPR111W	MUD1	P32605	298 aa	Known RBP	2.53	□□□□□ -2
DBF20	YPR111W	TIR2	P33890	251 aa		2.53	□□□□□ -2
DBF20	YPR111W	GPX2	P38143	162 aa		2.53	□□□□□ -2
DBF20	YPR111W	SDS24	P38314	527 aa		2.53	□□□□□ -2
DBF20	YPR111W	MTC6	P38849	526 aa		2.53	□□□□□ -2
DBF20	YPR111W	RBG1	P39729	369 aa		2.53	□□□□□ -2
DBF20	YPR111W	YIL067C	P40514	678 aa		2.53	□□□□□ -2
DBF20	YPR111W	SEC27	P41811	889 aa	Known RBP	2.53	□□□□□ -2
DBF20	YPR111W	EMC2	P47133	292 aa	Known RBP	2.53	□□□□□ -2
DBF20	YPR111W	TRF5	P48561	642 aa	Known RBP	2.53	□□□□□ -2
DBF20	YPR111W	MND1	P53102	219 aa		2.53	□□□□□ -2
DBF20	YPR111W	PNC1	P53184	216 aa	Known RBP	2.53	□□□□□ -2
DBF20	YPR111W	TRM112	P53738	135 aa	Predicted RBP	2.53	□□□□□ -2
DBF20	YPR111W	ELP3	Q02908	557 aa	Known RBP	2.53	□□□□□ -2
DBF20	YPR111W	HER2	Q03557	464 aa		2.53	□□□□□ -2
DBF20	YPR111W	ATC1	Q04005	294 aa		2.53	□□□□□ -2
DBF20	YPR111W	RNH1	Q04740	348 aa		2.53	□□□□□ -2
DBF20	YPR111W	NAT4	Q04751	285 aa		2.53	□□□□□ -2
DBF20	YPR111W	MRPL35	Q06678	367 aa		2.53	□□□□□ -2
DBF20	YPR111W	DNL4	Q08387	944 aa	Predicted RBP	2.53	□□□□□ -2
DBF20	YPR111W	SNX3	Q08826	162 aa	Known RBP	2.53	□□□□□ -2
DBF20	YPR111W	MRPL23	Q12487	163 aa	Predicted RBP	2.53	□□□□□ -2
DBF20	YPR111W	YOR338W	Q99326	363 aa		2.53	□□□□□ -2
DBF20	YPR111W	TDH1	P00360	332 aa	Known RBP	2.53	□□□□□ -2
DBF20	YPR111W	RPL18A	P0CX49	186 aa	Known RBP	2.53	□□□□□ -2
DBF20	YPR111W	RPL18B	P0CX50	186 aa	Known RBP	2.53	□□□□□ -2
DBF20	YPR111W	CIN8	P27895	1000 aa		2.53	□□□□□ -2
DBF20	YPR111W	KAR9	P32526	644 aa		2.53	□□□□□ -2
DBF20	YPR111W	GEP4	P38812	185 aa		2.53	□□□□□ -2
DBF20	YPR111W	REE1	P40893	198 aa		2.53	□□□□□ -2
DBF20	YPR111W	WWM1	P43582	211 aa	Known RBP	2.53	□□□□□ -2
DBF20	YPR111W	OKP1	P53298	406 aa		2.53	□□□□□ -2
DBF20	YPR111W	MKC7	P53379	596 aa		2.53	□□□□□ -2
DBF20	YPR111W	MPP6	P53725	186 aa	Predicted RBP	2.53	□□□□□ -2
DBF20	YPR111W	CWC21	Q03375	135 aa	Known RBP	2.53	□□□□□ -2
DBF20	YPR111W	SMP3	Q04174	516 aa		2.53	□□□□□ -2
DBF20	YPR111W	TSR1	Q07381	788 aa	Known RBP	2.53	□□□□□ -2
DBF20	YPR111W	SLF1	Q12034	447 aa	Known RBP	2.53	□□□□□ -2
DBF20	YPR111W	SIA1	Q12212	622 aa		2.53	□□□□□ -2
DBF20	YPR111W	MED4	Q12343	284 aa		2.53	□□□□□ -2
DBF20	YPR111W	STE2	D6VTK4	431 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	CYC3	P06182	269 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	PIS1	P06197	220 aa	Known RBP	2.52	□□□□□ -2.01
DBF20	YPR111W	REV1	P12689	985 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	NAM9	P27929	486 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	FUN26	P31381	517 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	HXT1	P32465	570 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	ECT1	P33412	323 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	RFS1	P38234	210 aa	Known RBP	2.52	□□□□□ -2.01
DBF20	YPR111W	HSM3	P38348	480 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	YMR262W	P38430	313 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	MMS21	P38632	267 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	CTM1	P38818	585 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	PTH1	P38876	190 aa	Known RBP	2.52	□□□□□ -2.01
DBF20	YPR111W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.52	□□□□□ -2.01	not detected
DBF20	YPR111W	RCY1	P39531	840 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	LIA1	P47120	325 aa	Known RBP	2.52	□□□□□ -2.01
DBF20	YPR111W	ABM1	P47146	123 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	CWC22	P53333	577 aa	Known RBP	2.52	□□□□□ -2.01
DBF20	YPR111W	SRL4	Q03085	281 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	YMR102C	Q03177	834 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	GRX3	Q03835	250 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	PAL1	Q05518	499 aa	Known RBP	2.52	□□□□□ -2.01
DBF20	YPR111W	BUR2	Q05949	395 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	BOP2	Q06150	570 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	CMS1	Q07897	291 aa	Known RBP	2.52	□□□□□ -2.01
DBF20	YPR111W	SMC5	Q08204	1093 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	RRT8	Q08219	342 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	PCL9	Q12477	304 aa		2.52	□□□□□ -2.01
DBF20	YPR111W	RAD1	P06777	1100 aa		2.51	□□□□□ -2.01
DBF20	YPR111W	FRS2	P15625	503 aa	Known RBP	2.51	□□□□□ -2.01
DBF20	YPR111W	UTR1	P21373	530 aa		2.51	□□□□□ -2.01
DBF20	YPR111W	ZIP1	P31111	875 aa		2.51	□□□□□ -2.01
DBF20	YPR111W	TPO5	P36029	618 aa		2.51	□□□□□ -2.01
DBF20	YPR111W	MAM33	P40513	266 aa		2.51	□□□□□ -2.01
DBF20	YPR111W	YAR1	P46683	200 aa		2.51	□□□□□ -2.01
DBF20	YPR111W	NAS6	P50086	228 aa		2.51	□□□□□ -2.01
DBF20	YPR111W	KEL2	P50090	882 aa		2.51	□□□□□ -2.01
DBF20	YPR111W	KAP114	P53067	1004 aa		2.51	□□□□□ -2.01
DBF20	YPR111W	MTM1	P53320	366 aa		2.51	□□□□□ -2.01
DBF20	YPR111W	YGR266W	P53326	701 aa		2.51	□□□□□ -2.01
DBF20	YPR111W	BIO4	P53630	237 aa		2.51	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 122.8 ms