RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C LDB7P38210 180 aa3.04□□□□□ -1.92
HRD1YOL013C SLX1P38324 304 aa3.04□□□□□ -1.92
HRD1YOL013C HIT1P46973 164 aa3.04□□□□□ -1.92
HRD1YOL013C HMS2P47175 358 aa3.04□□□□□ -1.92
HRD1YOL013C NAS6P50086 228 aa3.04□□□□□ -1.92
HRD1YOL013C ORC5P50874 479 aa3.04□□□□□ -1.92
HRD1YOL013C BIO4P53630 237 aa3.04□□□□□ -1.92
HRD1YOL013C SLT2Q00772 484 aa3.04□□□□□ -1.92
HRD1YOL013C PNG1Q02890 363 aa3.04□□□□□ -1.92
HRD1YOL013C IZH1Q03419 316 aa3.04□□□□□ -1.92
HRD1YOL013C ATX2Q12067 313 aa3.04□□□□□ -1.92
HRD1YOL013C ATG34Q12292 412 aa3.04□□□□□ -1.92
HRD1YOL013C ORT1Q12375 292 aa3.04□□□□□ -1.92
HRD1YOL013C YOR338WQ99326 363 aa3.04□□□□□ -1.92
HRD1YOL013C RPA190P10964 1664 aaKnown RBP3.04□□□□□ -1.92
HRD1YOL013C DNF1P32660 1571 aa3.03□□□□□ -1.92
HRD1YOL013C HEM2P05373 342 aa3.03□□□□□ -1.92
HRD1YOL013C RAD7P06779 565 aa3.03□□□□□ -1.92
HRD1YOL013C RHO1P06780 209 aaKnown RBP3.03□□□□□ -1.92
HRD1YOL013C SPO12P17123 173 aa3.03□□□□□ -1.92
HRD1YOL013C RPL5P26321 297 aaKnown RBP3.03□□□□□ -1.92
HRD1YOL013C RPS5P26783 225 aaKnown RBP3.03□□□□□ -1.92
HRD1YOL013C PRR1P28708 518 aa3.03□□□□□ -1.92
HRD1YOL013C UTR4P32626 227 aa3.03□□□□□ -1.92
HRD1YOL013C CBP4P37267 147 aa3.03□□□□□ -1.92
HRD1YOL013C PHO90P39535 881 aa3.03□□□□□ -1.92
HRD1YOL013C MMF1P40185 145 aaKnown RBP3.03□□□□□ -1.92
HRD1YOL013C YMR134WP40207 237 aa3.03□□□□□ -1.92
HRD1YOL013C SIM1P40472 476 aa3.03□□□□□ -1.92
HRD1YOL013C YRB2P40517 327 aa3.03□□□□□ -1.92
HRD1YOL013C YGR210CP42942 411 aa3.03□□□□□ -1.92
HRD1YOL013C HSH155P49955 971 aaKnown RBP3.03□□□□□ -1.92
HRD1YOL013C NOP13P53883 403 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
HRD1YOL013C RPL15BP54780 204 aaPredicted RBP3.03□□□□□ -1.92
HRD1YOL013C NUP100Q02629 959 aa3.03□□□□□ -1.92
HRD1YOL013C RLI1Q03195 608 aaKnown RBP3.03□□□□□ -1.92
HRD1YOL013C SLD5Q03406 294 aa3.03□□□□□ -1.92
HRD1YOL013C APC2Q12440 853 aa3.03□□□□□ -1.92
HRD1YOL013C RGS2Q99188 309 aa3.03□□□□□ -1.92
HRD1YOL013C PDR15Q04182 1529 aaKnown RBP3.02□□□□□ -1.93
HRD1YOL013C MAS2P11914 482 aa3.02□□□□□ -1.93
HRD1YOL013C YPK2P18961 677 aa3.02□□□□□ -1.93
HRD1YOL013C RPB8P20436 146 aa3.02□□□□□ -1.93
HRD1YOL013C OSM1P21375 501 aaKnown RBP3.02□□□□□ -1.93
HRD1YOL013C AIM17P23180 465 aaKnown RBP3.02□□□□□ -1.93
HRD1YOL013C SKG6P32900 734 aaPredicted RBP3.02□□□□□ -1.93
HRD1YOL013C MAL32P38158 584 aa3.02□□□□□ -1.93
HRD1YOL013C ARN1P38731 627 aa3.02□□□□□ -1.93
HRD1YOL013C ISC1P40015 477 aaKnown RBP3.02□□□□□ -1.93
HRD1YOL013C MEP2P41948 499 aa3.02□□□□□ -1.93
HRD1YOL013C SCD6P45978 349 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
HRD1YOL013C MDV1P47025 714 aa3.02□□□□□ -1.93
HRD1YOL013C HAM1P47119 197 aaKnown RBP3.02□□□□□ -1.93
HRD1YOL013C ABM1P47146 123 aa3.02□□□□□ -1.93
HRD1YOL013C SSN8P47821 323 aa3.02□□□□□ -1.93
HRD1YOL013C GPI1P53306 609 aa3.02□□□□□ -1.93
HRD1YOL013C MAL12P53341 584 aa3.02□□□□□ -1.93
HRD1YOL013C YMR209CQ03648 457 aa3.02□□□□□ -1.93
HRD1YOL013C IVY1Q04934 453 aa3.02□□□□□ -1.93
HRD1YOL013C GRS2Q06817 618 aa3.02□□□□□ -1.93
HRD1YOL013C YPQ1Q12010 308 aa3.02□□□□□ -1.93
HRD1YOL013C TOP2P06786 1428 aaKnown RBP3.02□□□□□ -1.93
HRD1YOL013C ATP1P07251 545 aaKnown RBP3.01□□□□□ -1.93
HRD1YOL013C FAR1P21268 830 aa3.01□□□□□ -1.93
HRD1YOL013C YSR3P23501 404 aa3.01□□□□□ -1.93
HRD1YOL013C POP5P28005 173 aa3.01□□□□□ -1.93
HRD1YOL013C GCG1P32656 232 aaKnown RBP3.01□□□□□ -1.93
HRD1YOL013C YCR041WP37265 110 aa3.01□□□□□ -1.93
HRD1YOL013C SCO2P38072 301 aa3.01□□□□□ -1.93
HRD1YOL013C DTR1P38125 572 aa3.01□□□□□ -1.93
HRD1YOL013C HIS2P38635 335 aa3.01□□□□□ -1.93
HRD1YOL013C LEU5P38702 357 aa3.01□□□□□ -1.93
HRD1YOL013C FAA2P39518 744 aa3.01□□□□□ -1.93
HRD1YOL013C COA1P40452 197 aa3.01□□□□□ -1.93
HRD1YOL013C YIR016WP40572 265 aa3.01□□□□□ -1.93
HRD1YOL013C AIM24P47127 394 aa3.01□□□□□ -1.93
HRD1YOL013C KAP114P53067 1004 aa3.01□□□□□ -1.93
HRD1YOL013C RRN9P53437 365 aa3.01□□□□□ -1.93
HRD1YOL013C SSK1Q07084 712 aa3.01□□□□□ -1.93
HRD1YOL013C PAM18Q07914 168 aa3.01□□□□□ -1.93
HRD1YOL013C SDO1Q07953 250 aaKnown RBP3.01□□□□□ -1.93
HRD1YOL013C YOL075CQ08234 1294 aa3.01□□□□□ -1.93
HRD1YOL013C HIS4P00815 799 aaKnown RBP3.01□□□□□ -1.93
HRD1YOL013C GAL4P04386 881 aa3.01□□□□□ -1.93
HRD1YOL013C TPK3P05986 398 aa3.01□□□□□ -1.93
HRD1YOL013C ARF1P11076 181 aaKnown RBP3.01□□□□□ -1.93
HRD1YOL013C RRT12P25381 491 aa3.01□□□□□ -1.93
HRD1YOL013C PBN1P25580 416 aa3.01□□□□□ -1.93
HRD1YOL013C ZIP1P31111 875 aa3.01□□□□□ -1.93
HRD1YOL013C VAM7P32912 316 aa3.01□□□□□ -1.93
HRD1YOL013C DOA1P36037 715 aa3.01□□□□□ -1.93
HRD1YOL013C AIM29P36154 155 aa3.01□□□□□ -1.93
HRD1YOL013C CCT4P39078 528 aaKnown RBP3.01□□□□□ -1.93
HRD1YOL013C YHB1P39676 399 aaKnown RBP3.01□□□□□ -1.93
HRD1YOL013C YIP1P53039 248 aa3.01□□□□□ -1.93
HRD1YOL013C RMR1P53060 241 aa3.01□□□□□ -1.93
HRD1YOL013C TRM112P53738 135 aaPredicted RBP3.01□□□□□ -1.93
HRD1YOL013C FRE4P53746 719 aa3.01□□□□□ -1.93
HRD1YOL013C ESBP6P53918 673 aa3.01□□□□□ -1.93
HRD1YOL013C MSS11Q03825 758 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms