RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C RMR1P53060 241 aa9.28□□□□□ -0.92
SHB17YKR043C RNH202Q05635 350 aa9.28□□□□□ -0.92
SHB17YKR043C SWA2Q06677 668 aa9.28□□□□□ -0.92
SHB17YKR043C VPS36Q06696 566 aa9.28□□□□□ -0.92
SHB17YKR043C BRX1Q08235 291 aaKnown RBP9.28□□□□□ -0.92
SHB17YKR043C MTR10Q99189 972 aa9.28□□□□□ -0.92
SHB17YKR043C IDH1P28834 360 aaKnown RBP RIP-Chip data9.27□□□□□ -0.93not detected
SHB17YKR043C HCS1P34243 683 aa9.27□□□□□ -0.93
SHB17YKR043C YHL012WP38709 493 aa9.27□□□□□ -0.93
SHB17YKR043C YJR142WP47173 342 aa9.27□□□□□ -0.93
SHB17YKR043C BPL1P48445 690 aaPredicted RBP9.27□□□□□ -0.93
SHB17YKR043C IMD4P50094 524 aaKnown RBP9.27□□□□□ -0.93
SHB17YKR043C EKI1Q03764 534 aa9.27□□□□□ -0.93
SHB17YKR043C RDR1Q08904 546 aa9.27□□□□□ -0.93
SHB17YKR043C YDL177CQ12257 170 aa9.27□□□□□ -0.93
SHB17YKR043C PSY3Q12318 242 aa9.27□□□□□ -0.93
SHB17YKR043C YOL159C-AQ3E769 90 aa9.27□□□□□ -0.93
SHB17YKR043C YFR010W-AP0C5N0 62 aa9.26□□□□□ -0.93
SHB17YKR043C YOL163WP0CF20 169 aa9.26□□□□□ -0.93
SHB17YKR043C RPL43AP0CX25 92 aaKnown RBP9.26□□□□□ -0.93
SHB17YKR043C RPL43BP0CX26 92 aa9.26□□□□□ -0.93
SHB17YKR043C CLB4P24871 460 aa9.26□□□□□ -0.93
SHB17YKR043C APE4P38821 490 aa9.26□□□□□ -0.93
SHB17YKR043C CAK1P43568 368 aaPredicted RBP9.26□□□□□ -0.93
SHB17YKR043C YGR016WP53209 190 aa9.26□□□□□ -0.93
SHB17YKR043C YDR249CQ03787 373 aa9.26□□□□□ -0.93
SHB17YKR043C BUR2Q05949 395 aa9.26□□□□□ -0.93
SHB17YKR043C CDC4P07834 779 aa9.25□□□□□ -0.93
SHB17YKR043C YHR214C-DP0CX93 97 aa9.25□□□□□ -0.93
SHB17YKR043C ERD2P18414 219 aa9.25□□□□□ -0.93
SHB17YKR043C ATS1P31386 333 aa9.25□□□□□ -0.93
SHB17YKR043C HIR2P32480 875 aa9.25□□□□□ -0.93
SHB17YKR043C SPC34P36131 295 aa9.25□□□□□ -0.93
SHB17YKR043C YKR073CP36153 106 aa9.25□□□□□ -0.93
SHB17YKR043C MTC4P38335 694 aaKnown RBP9.25□□□□□ -0.93
SHB17YKR043C RRP4P38792 359 aaKnown RBP9.25□□□□□ -0.93
SHB17YKR043C YER010CP40011 234 aa9.25□□□□□ -0.93
SHB17YKR043C VHR1P40522 640 aa9.25□□□□□ -0.93
SHB17YKR043C ECL1P48235 211 aa9.25□□□□□ -0.93
SHB17YKR043C RPN14P53196 417 aa9.25□□□□□ -0.93
SHB17YKR043C MEP3P53390 489 aa9.25□□□□□ -0.93
SHB17YKR043C HMO1Q03973 246 aaKnown RBP9.25□□□□□ -0.93
SHB17YKR043C NOP12Q08208 459 aaKnown RBP9.25□□□□□ -0.93
SHB17YKR043C PHO2P07269 559 aa9.24□□□□□ -0.93
SHB17YKR043C PBS2P08018 668 aa9.24□□□□□ -0.93
SHB17YKR043C ITR2P30606 609 aa9.24□□□□□ -0.93
SHB17YKR043C GPI16P38875 610 aa9.24□□□□□ -0.93
SHB17YKR043C YEL068CP39977 110 aa9.24□□□□□ -0.93
SHB17YKR043C HDA2Q06629 674 aa9.24□□□□□ -0.93
SHB17YKR043C CRT10Q08226 957 aa9.24□□□□□ -0.93
SHB17YKR043C AVO1Q08236 1176 aa9.24□□□□□ -0.93
SHB17YKR043C ENB1Q08299 606 aa9.24□□□□□ -0.93
SHB17YKR043C MCP1Q12106 302 aa9.24□□□□□ -0.93
SHB17YKR043C SWM1Q12379 170 aa9.24□□□□□ -0.93
SHB17YKR043C SIR3P06701 978 aa9.23□□□□□ -0.93
SHB17YKR043C YAK1P14680 807 aa9.23□□□□□ -0.93
SHB17YKR043C HBS1P32769 611 aaKnown RBP9.23□□□□□ -0.93
SHB17YKR043C YIL169CP40442 995 aa9.23□□□□□ -0.93
SHB17YKR043C REE1P40893 198 aa9.23□□□□□ -0.93
SHB17YKR043C AGP3P43548 558 aa9.23□□□□□ -0.93
SHB17YKR043C MRK1P50873 501 aa9.23□□□□□ -0.93
SHB17YKR043C ERP6P53198 216 aa9.23□□□□□ -0.93
SHB17YKR043C BUD9P53226 547 aa9.23□□□□□ -0.93
SHB17YKR043C SDC1Q03323 175 aa9.23□□□□□ -0.93
SHB17YKR043C SNX41Q04053 625 aa9.23□□□□□ -0.93
SHB17YKR043C HFD1Q04458 532 aa9.23□□□□□ -0.93
SHB17YKR043C FMP45Q07651 309 aa9.23□□□□□ -0.93
SHB17YKR043C SKI7Q08491 747 aaPredicted RBP9.23□□□□□ -0.93
SHB17YKR043C YRA1Q12159 226 aaKnown RBP9.23□□□□□ -0.93
SHB17YKR043C PRS5Q12265 496 aaKnown RBP9.23□□□□□ -0.93
SHB17YKR043C DFG16Q99234 619 aa9.23□□□□□ -0.93
SHB17YKR043C DET1Q99288 334 aaKnown RBP9.23□□□□□ -0.93
SHB17YKR043C Q0144Q9ZZW2 109 aa9.23□□□□□ -0.93
SHB17YKR043C MEC1P38111 2368 aa9.22□□□□□ -0.93
SHB17YKR043C CTA1P15202 515 aa9.22□□□□□ -0.93
SHB17YKR043C ERG9P29704 444 aa9.22□□□□□ -0.93
SHB17YKR043C APE2P32454 952 aaKnown RBP9.22□□□□□ -0.93
SHB17YKR043C APD1P38281 316 aa9.22□□□□□ -0.93
SHB17YKR043C PEX18P38855 283 aa9.22□□□□□ -0.93
SHB17YKR043C HXT9P40885 567 aa9.22□□□□□ -0.93
SHB17YKR043C GCN20P43535 752 aaKnown RBP9.22□□□□□ -0.93
SHB17YKR043C FMP33P46998 180 aa9.22□□□□□ -0.93
SHB17YKR043C SHE4P51534 789 aa9.22□□□□□ -0.93
SHB17YKR043C BSC5P53755 489 aa9.22□□□□□ -0.93
SHB17YKR043C HXT11P54862 567 aa9.22□□□□□ -0.93
SHB17YKR043C YSA1Q01976 231 aa9.22□□□□□ -0.93
SHB17YKR043C YKR011CQ02209 353 aa9.22□□□□□ -0.93
SHB17YKR043C NDL1Q06568 189 aa9.22□□□□□ -0.93
SHB17YKR043C HNT3Q08702 217 aa9.22□□□□□ -0.93
SHB17YKR043C FLO9P39712 1322 aa9.22□□□□□ -0.93
SHB17YKR043C SNF4P12904 322 aa9.21□□□□□ -0.94
SHB17YKR043C YCR100CP25606 316 aa9.21□□□□□ -0.94
SHB17YKR043C EHD3P28817 500 aa9.21□□□□□ -0.94
SHB17YKR043C CDC3P32457 520 aaKnown RBP9.21□□□□□ -0.94
SHB17YKR043C ECM15P35195 104 aa9.21□□□□□ -0.94
SHB17YKR043C YHR180WP38868 163 aa9.21□□□□□ -0.94
SHB17YKR043C ALP1P38971 573 aa9.21□□□□□ -0.94
SHB17YKR043C MNN5P46982 586 aa9.21□□□□□ -0.94
SHB17YKR043C PRY1P47032 299 aa9.21□□□□□ -0.94
SHB17YKR043C ASI2P53895 289 aa9.21□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms