RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W BRR1Q99177 341 aaPredicted RBP1.91□□□□□ -2.1
RTT107YHR154W AI5_BETAQ9ZZX0 354 aa1.91□□□□□ -2.1
RTT107YHR154W PGK1P00560 416 aaKnown RBP1.91□□□□□ -2.1
RTT107YHR154W RPS13P05756 151 aaKnown RBP1.91□□□□□ -2.1
RTT107YHR154W GDH1P07262 454 aaKnown RBP1.91□□□□□ -2.1
RTT107YHR154W PEP4P07267 405 aaKnown RBP1.91□□□□□ -2.1
RTT107YHR154W MSF1P08425 469 aa1.91□□□□□ -2.1
RTT107YHR154W CHO1P08456 276 aa1.91□□□□□ -2.1
RTT107YHR154W PRP16P15938 1071 aaPredicted RBP1.91□□□□□ -2.1
RTT107YHR154W CDC23P16522 626 aa1.91□□□□□ -2.1
RTT107YHR154W FPR1P20081 114 aaKnown RBP1.91□□□□□ -2.1
RTT107YHR154W STE11P23561 717 aa1.91□□□□□ -2.1
RTT107YHR154W ERG4P25340 473 aa1.91□□□□□ -2.1
RTT107YHR154W RSA4P25382 515 aaKnown RBP1.91□□□□□ -2.1
RTT107YHR154W SIN4P32259 974 aa1.91□□□□□ -2.1
RTT107YHR154W MSN2P33748 704 aa1.91□□□□□ -2.1
RTT107YHR154W RSM22P36056 628 aa1.91□□□□□ -2.1
RTT107YHR154W YPT10P38146 199 aa1.91□□□□□ -2.1
RTT107YHR154W PET100P38958 111 aa1.91□□□□□ -2.1
RTT107YHR154W STN1P38960 494 aa1.91□□□□□ -2.1
RTT107YHR154W GAT2P40209 560 aa1.91□□□□□ -2.1
RTT107YHR154W SAS2P40963 338 aa1.91□□□□□ -2.1
RTT107YHR154W AIM24P47127 394 aa1.91□□□□□ -2.1
RTT107YHR154W ATG4P53867 494 aa1.91□□□□□ -2.1
RTT107YHR154W SLG1P54867 378 aa1.91□□□□□ -2.1
RTT107YHR154W SLT2Q00772 484 aa1.91□□□□□ -2.1
RTT107YHR154W MSC1Q03104 513 aa1.91□□□□□ -2.1
RTT107YHR154W URH1Q04179 340 aa1.91□□□□□ -2.1
RTT107YHR154W NDL1Q06568 189 aa1.91□□□□□ -2.1
RTT107YHR154W PBP4Q07362 185 aaKnown RBP1.91□□□□□ -2.1
RTT107YHR154W SNA4Q07549 140 aa1.91□□□□□ -2.1
RTT107YHR154W YOL075CQ08234 1294 aa1.91□□□□□ -2.1
RTT107YHR154W UBA3Q99344 299 aa1.91□□□□□ -2.1
RTT107YHR154W TPK3P05986 398 aa1.91□□□□□ -2.1
RTT107YHR154W RAD3P06839 778 aa1.91□□□□□ -2.1
RTT107YHR154W TRP4P07285 380 aaPredicted RBP1.91□□□□□ -2.1
RTT107YHR154W GLN3P18494 730 aa1.91□□□□□ -2.1
RTT107YHR154W SAC1P32368 623 aaKnown RBP1.91□□□□□ -2.1
RTT107YHR154W MNS1P32906 549 aa1.91□□□□□ -2.1
RTT107YHR154W SKN1P33336 771 aa1.91□□□□□ -2.1
RTT107YHR154W YNK1P36010 153 aaKnown RBP1.91□□□□□ -2.1
RTT107YHR154W STP2P38704 541 aa1.91□□□□□ -2.1
RTT107YHR154W UTP25P40498 721 aaKnown RBP1.91□□□□□ -2.1
RTT107YHR154W HOP2P53187 214 aa1.91□□□□□ -2.1
RTT107YHR154W EFM5P53200 248 aaKnown RBP1.91□□□□□ -2.1
RTT107YHR154W REX2P54964 269 aaKnown RBP1.91□□□□□ -2.1
RTT107YHR154W YDR209CQ03480 137 aa1.91□□□□□ -2.1
RTT107YHR154W ECM11Q04110 302 aa1.91□□□□□ -2.1
RTT107YHR154W HSP31Q04432 237 aa1.91□□□□□ -2.1
RTT107YHR154W YDL218WQ07629 317 aa1.91□□□□□ -2.1
RTT107YHR154W PRP46Q12417 451 aaPredicted RBP1.91□□□□□ -2.1
RTT107YHR154W SCEIP03882 235 aa1.9□□□□□ -2.11
RTT107YHR154W ARG4P04076 463 aaPredicted RBP1.9□□□□□ -2.11
RTT107YHR154W MTF1P14908 341 aaKnown RBP1.9□□□□□ -2.11
RTT107YHR154W TYR1P20049 452 aa1.9□□□□□ -2.11
RTT107YHR154W CKI1P20485 582 aa1.9□□□□□ -2.11
RTT107YHR154W HRR25P29295 494 aaKnown RBP1.9□□□□□ -2.11
RTT107YHR154W SWD2P36104 329 aaPredicted RBP1.9□□□□□ -2.11
RTT107YHR154W LDB7P38210 180 aa1.9□□□□□ -2.11
RTT107YHR154W AIM3P38266 947 aaKnown RBP1.9□□□□□ -2.11
RTT107YHR154W NDT80P38830 627 aa1.9□□□□□ -2.11
RTT107YHR154W YFL015CP43578 164 aa1.9□□□□□ -2.11
RTT107YHR154W PHO86P46956 311 aa1.9□□□□□ -2.11
RTT107YHR154W TOM22P49334 152 aa1.9□□□□□ -2.11
RTT107YHR154W YNL234WP53857 426 aa1.9□□□□□ -2.11
RTT107YHR154W RSN1Q03516 953 aa1.9□□□□□ -2.11
RTT107YHR154W SNU56Q03782 492 aaKnown RBP1.9□□□□□ -2.11
RTT107YHR154W SMC5Q08204 1093 aa1.9□□□□□ -2.11
RTT107YHR154W YDR262WQ12331 272 aa1.9□□□□□ -2.11
RTT107YHR154W RRP12Q12754 1228 aaKnown RBP1.9□□□□□ -2.11
RTT107YHR154W SEY1Q99287 776 aa1.9□□□□□ -2.11
RTT107YHR154W ADE4P04046 510 aaKnown RBP1.9□□□□□ -2.11
RTT107YHR154W CDC6P09119 513 aa1.9□□□□□ -2.11
RTT107YHR154W IMA3P0CW40 589 aa1.9□□□□□ -2.11
RTT107YHR154W IMA4P0CW41 589 aa1.9□□□□□ -2.11
RTT107YHR154W NUP1P20676 1076 aa1.9□□□□□ -2.11
RTT107YHR154W YCP4P25349 247 aaKnown RBP1.9□□□□□ -2.11
RTT107YHR154W PUT3P25502 979 aaPredicted RBP1.9□□□□□ -2.11
RTT107YHR154W MEI5P32489 222 aa1.9□□□□□ -2.11
RTT107YHR154W CBT1P36038 271 aaPredicted RBP1.9□□□□□ -2.11
RTT107YHR154W LYS12P40495 371 aaKnown RBP1.9□□□□□ -2.11
RTT107YHR154W YIA6P40556 373 aa1.9□□□□□ -2.11
RTT107YHR154W RPS10BP46784 105 aaKnown RBP1.9□□□□□ -2.11
RTT107YHR154W TRS85P46944 698 aa1.9□□□□□ -2.11
RTT107YHR154W ABM1P47146 123 aa1.9□□□□□ -2.11
RTT107YHR154W YPL068CQ02749 293 aa1.9□□□□□ -2.11
RTT107YHR154W MRPS17Q03246 237 aaPredicted RBP1.9□□□□□ -2.11
RTT107YHR154W HRD3Q05787 833 aa1.9□□□□□ -2.11
RTT107YHR154W ATG26Q06321 1198 aa1.9□□□□□ -2.11
RTT107YHR154W IMA2Q08295 589 aa1.9□□□□□ -2.11
RTT107YHR154W GEP3Q08622 556 aa1.9□□□□□ -2.11
RTT107YHR154W GET4Q12125 312 aa1.9□□□□□ -2.11
RTT107YHR154W POM33Q12164 279 aa1.9□□□□□ -2.11
RTT107YHR154W ARP6Q12509 438 aa1.9□□□□□ -2.11
RTT107YHR154W CMC2Q3E7A4 109 aa1.9□□□□□ -2.11
RTT107YHR154W IRA1P18963 3092 aa1.9□□□□□ -2.11
RTT107YHR154W RAD52P06778 471 aaKnown RBP1.89□□□□□ -2.11
RTT107YHR154W SPT3P06844 337 aa1.89□□□□□ -2.11
RTT107YHR154W PPR1P07272 904 aaPredicted RBP1.89□□□□□ -2.11
RTT107YHR154W RPL27AP0C2H6 136 aaKnown RBP1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms