RNA–Protein interactions for RNA: YGR049W

SCM4, Transcript of Mitochondrial outer membrane protein of unknown function, yeast

Gene SCM4, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCM4	YGR049W	KAP104	P38217	918 aa	Known RBP	3.22	□□□□□ -1.89
SCM4	YGR049W	RFS1	P38234	210 aa	Known RBP	3.22	□□□□□ -1.89
SCM4	YGR049W	RCK2	P38623	610 aa		3.22	□□□□□ -1.89
SCM4	YGR049W	SHC1	P39000	512 aa		3.22	□□□□□ -1.89
SCM4	YGR049W	RRT5	P43607	289 aa		3.22	□□□□□ -1.89
SCM4	YGR049W	FMP33	P46998	180 aa		3.22	□□□□□ -1.89
SCM4	YGR049W	YNL247W	P53852	767 aa	Known RBP	3.22	□□□□□ -1.89
SCM4	YGR049W	YNL040W	P53960	456 aa	Predicted RBP	3.22	□□□□□ -1.89
SCM4	YGR049W	GPI15	P53961	229 aa		3.22	□□□□□ -1.89
SCM4	YGR049W	MMT1	Q03218	510 aa		3.22	□□□□□ -1.89
SCM4	YGR049W	YML108W	Q03759	105 aa		3.22	□□□□□ -1.89
SCM4	YGR049W	YDR387C	Q04162	555 aa		3.22	□□□□□ -1.89
SCM4	YGR049W	YPR078C	Q06813	372 aa		3.22	□□□□□ -1.89
SCM4	YGR049W	SOR2	Q07786	357 aa		3.22	□□□□□ -1.89
SCM4	YGR049W	MUM3	Q08750	479 aa		3.22	□□□□□ -1.89
SCM4	YGR049W	SLM3	Q12093	417 aa		3.22	□□□□□ -1.89
SCM4	YGR049W	YER078W-A	Q3E7A2	54 aa		3.22	□□□□□ -1.89
SCM4	YGR049W	REP1	P03871	373 aa		3.21	□□□□□ -1.9
SCM4	YGR049W	VPS1	P21576	704 aa	Known RBP	3.21	□□□□□ -1.9
SCM4	YGR049W	UBA1	P22515	1024 aa	Known RBP	3.21	□□□□□ -1.9
SCM4	YGR049W	MRPL25	P23369	157 aa		3.21	□□□□□ -1.9
SCM4	YGR049W	CTR86	P25355	563 aa		3.21	□□□□□ -1.9
SCM4	YGR049W	LSB5	P25369	354 aa		3.21	□□□□□ -1.9
SCM4	YGR049W	SPS22	P25380	463 aa		3.21	□□□□□ -1.9
SCM4	YGR049W	BUD23	P25627	275 aa	Predicted RBP	3.21	□□□□□ -1.9
SCM4	YGR049W	PHO91	P27514	894 aa		3.21	□□□□□ -1.9
SCM4	YGR049W	UTP11	P34247	250 aa	Predicted RBP	3.21	□□□□□ -1.9
SCM4	YGR049W	ADH5	P38113	351 aa	Known RBP	3.21	□□□□□ -1.9
SCM4	YGR049W	RRP4	P38792	359 aa	Known RBP	3.21	□□□□□ -1.9
SCM4	YGR049W	YIL089W	P40500	205 aa		3.21	□□□□□ -1.9
SCM4	YGR049W	MKT1	P40850	830 aa	Known RBP	3.21	□□□□□ -1.9
SCM4	YGR049W	SPG5	P42933	373 aa		3.21	□□□□□ -1.9
SCM4	YGR049W	LAM5	P43560	674 aa		3.21	□□□□□ -1.9
SCM4	YGR049W	MIG2	P53035	382 aa		3.21	□□□□□ -1.9
SCM4	YGR049W	YIP1	P53039	248 aa		3.21	□□□□□ -1.9
SCM4	YGR049W	MPS2	P53159	387 aa		3.21	□□□□□ -1.9
SCM4	YGR049W	MSO1	P53604	210 aa	Known RBP	3.21	□□□□□ -1.9
SCM4	YGR049W	YNR048W	P53740	393 aa		3.21	□□□□□ -1.9
SCM4	YGR049W	UTP6	Q02354	440 aa	Known RBP	3.21	□□□□□ -1.9
SCM4	YGR049W	RSN1	Q03516	953 aa		3.21	□□□□□ -1.9
SCM4	YGR049W	YLH47	Q06493	454 aa		3.21	□□□□□ -1.9
SCM4	YGR049W	IPK1	Q06667	281 aa		3.21	□□□□□ -1.9
SCM4	YGR049W	HNT3	Q08702	217 aa		3.21	□□□□□ -1.9
SCM4	YGR049W	RSA1	Q08932	381 aa		3.21	□□□□□ -1.9
SCM4	YGR049W	RTC5	Q12108	567 aa	Known RBP	3.21	□□□□□ -1.9
SCM4	YGR049W	RPL24A	P04449	155 aa	Known RBP	3.2	□□□□□ -1.9
SCM4	YGR049W	ILV5	P06168	395 aa	Known RBP	3.2	□□□□□ -1.9
SCM4	YGR049W	GCN3	P14741	305 aa		3.2	□□□□□ -1.9
SCM4	YGR049W	CPR1	P14832	162 aa	Known RBP	3.2	□□□□□ -1.9
SCM4	YGR049W	CBS2	P14905	389 aa		3.2	□□□□□ -1.9
SCM4	YGR049W	ITR2	P30606	609 aa		3.2	□□□□□ -1.9
SCM4	YGR049W	CYS4	P32582	507 aa	Known RBP	3.2	□□□□□ -1.9
SCM4	YGR049W	SRB2	P34162	210 aa		3.2	□□□□□ -1.9
SCM4	YGR049W	AST1	P35183	429 aa		3.2	□□□□□ -1.9
SCM4	YGR049W	RPC25	P35718	212 aa		3.2	□□□□□ -1.9
SCM4	YGR049W	YBR139W	P38109	508 aa		3.2	□□□□□ -1.9
SCM4	YGR049W	PFF1	P38244	976 aa		3.2	□□□□□ -1.9
SCM4	YGR049W	MMS21	P38632	267 aa		3.2	□□□□□ -1.9
SCM4	YGR049W	INM1	P38710	295 aa		3.2	□□□□□ -1.9
SCM4	YGR049W	RRF1	P38771	230 aa		3.2	□□□□□ -1.9
SCM4	YGR049W	LYS1	P38998	373 aa	RIP-Chip data	3.2	□□□□□ -1.9	RIP-Chip
SCM4	YGR049W	ISC1	P40015	477 aa	Known RBP	3.2	□□□□□ -1.9
SCM4	YGR049W	YIL067C	P40514	678 aa		3.2	□□□□□ -1.9
SCM4	YGR049W	RTT102	P53330	157 aa		3.2	□□□□□ -1.9
SCM4	YGR049W	PRM1	P53835	661 aa		3.2	□□□□□ -1.9
SCM4	YGR049W	TIM11	P81449	96 aa	Predicted RBP	3.2	□□□□□ -1.9
SCM4	YGR049W	PLP1	Q04004	230 aa		3.2	□□□□□ -1.9
SCM4	YGR049W	RRP9	Q06506	573 aa	Known RBP	3.2	□□□□□ -1.9
SCM4	YGR049W	PKH2	Q12236	1081 aa	Known RBP	3.2	□□□□□ -1.9
SCM4	YGR049W	YLR462W	O13556	202 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	CDC21	P06785	304 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	YAK1	P14680	807 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	ARO3	P14843	370 aa	Known RBP	3.19	□□□□□ -1.9
SCM4	YGR049W	CKA2	P19454	339 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	OSM1	P21375	501 aa	Known RBP	3.19	□□□□□ -1.9
SCM4	YGR049W	YCR100C	P25606	316 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	RPS5	P26783	225 aa	Known RBP	3.19	□□□□□ -1.9
SCM4	YGR049W	GLC7	P32598	312 aa	Known RBP	3.19	□□□□□ -1.9
SCM4	YGR049W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
SCM4	YGR049W	CSE1	P33307	960 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	YBR032W	P38223	100 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	YHL049C	P38722	271 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	YEL075C	P39972	122 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	LCP5	P40079	357 aa	Predicted RBP	3.19	□□□□□ -1.9
SCM4	YGR049W	YER189W	P40104	122 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	YFL064C	P43540	174 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	EFM3	P47163	339 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	HMS2	P47175	358 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	PCP1	P53259	346 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	YNR068C	P53754	272 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	CAF40	P53829	373 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	YIF1	P53845	314 aa	Known RBP	3.19	□□□□□ -1.9
SCM4	YGR049W	IBD2	P53892	351 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	AQR1	P53943	586 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	SWP1	Q02795	286 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	FMN1	Q03778	218 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	SMC5	Q08204	1093 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	YOL075C	Q08234	1294 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	REX3	Q12090	404 aa		3.19	□□□□□ -1.9
SCM4	YGR049W	PSY3	Q12318	242 aa		3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms