RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene SLD5, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD5YDR489W PEX32P38292 413 aa2.59□□□□□ -1.99
SLD5YDR489W ATG7P38862 630 aa2.59□□□□□ -1.99
SLD5YDR489W TRF5P48561 642 aaKnown RBP2.59□□□□□ -1.99
SLD5YDR489W ALF1P53904 254 aa2.59□□□□□ -1.99
SLD5YDR489W PRO2P54885 456 aaKnown RBP2.59□□□□□ -1.99
SLD5YDR489W REX2P54964 269 aaKnown RBP2.59□□□□□ -1.99
SLD5YDR489W RRB1Q04225 511 aaKnown RBP2.59□□□□□ -1.99
SLD5YDR489W YOL075CQ08234 1294 aa2.59□□□□□ -1.99
SLD5YDR489W SFM1Q12314 213 aa2.59□□□□□ -1.99
SLD5YDR489W HTZ1Q12692 134 aaKnown RBP2.59□□□□□ -1.99
SLD5YDR489W PRB1P09232 635 aa2.58□□□□□ -2
SLD5YDR489W RPS18AP0CX55 146 aaKnown RBP2.58□□□□□ -2
SLD5YDR489W RPS18BP0CX56 146 aaPredicted RBP2.58□□□□□ -2
SLD5YDR489W GIT1P25346 518 aa2.58□□□□□ -2
SLD5YDR489W CDC50P25656 391 aa2.58□□□□□ -2
SLD5YDR489W PRS1P32895 427 aaKnown RBP2.58□□□□□ -2
SLD5YDR489W ECM8P38246 354 aa2.58□□□□□ -2
SLD5YDR489W IST2P38250 946 aa2.58□□□□□ -2
SLD5YDR489W TIM17P39515 158 aa2.58□□□□□ -2
SLD5YDR489W YNL208WP40159 199 aaKnown RBP2.58□□□□□ -2
SLD5YDR489W YMR134WP40207 237 aa2.58□□□□□ -2
SLD5YDR489W DFG10P40526 253 aa2.58□□□□□ -2
SLD5YDR489W SNL1P40548 159 aa2.58□□□□□ -2
SLD5YDR489W AIP1P46680 615 aaKnown RBP2.58□□□□□ -2
SLD5YDR489W YHC3P47040 408 aa2.58□□□□□ -2
SLD5YDR489W SEH1P53011 349 aaKnown RBP2.58□□□□□ -2
SLD5YDR489W ADD37Q03233 198 aa2.58□□□□□ -2
SLD5YDR489W SMP3Q04174 516 aa2.58□□□□□ -2
SLD5YDR489W YMR310CQ04867 317 aaPredicted RBP2.58□□□□□ -2
SLD5YDR489W DNL4Q08387 944 aaPredicted RBP2.58□□□□□ -2
SLD5YDR489W YDL109CQ12103 647 aa2.58□□□□□ -2
SLD5YDR489W HEM4P06174 275 aa2.57□□□□□ -2
SLD5YDR489W PCL1P24867 279 aa2.57□□□□□ -2
SLD5YDR489W YKR015CP36111 568 aa2.57□□□□□ -2
SLD5YDR489W YIL089WP40500 205 aa2.57□□□□□ -2
SLD5YDR489W YCH1P42937 148 aa2.57□□□□□ -2
SLD5YDR489W LST7P53237 242 aa2.57□□□□□ -2
SLD5YDR489W VHT1P53241 593 aa2.57□□□□□ -2
SLD5YDR489W PRM1P53835 661 aa2.57□□□□□ -2
SLD5YDR489W PRP38Q00723 242 aaPredicted RBP2.57□□□□□ -2
SLD5YDR489W MGR3Q04472 501 aa2.57□□□□□ -2
SLD5YDR489W MSC3Q05812 728 aa2.57□□□□□ -2
SLD5YDR489W STE23Q06010 1027 aa2.57□□□□□ -2
SLD5YDR489W ATP16Q12165 160 aa2.57□□□□□ -2
SLD5YDR489W HIF1Q12373 385 aa2.57□□□□□ -2
SLD5YDR489W RPL23AP0CX41 137 aaKnown RBP2.56□□□□□ -2
SLD5YDR489W RPL23BP0CX42 137 aaKnown RBP2.56□□□□□ -2
SLD5YDR489W ZRC1P20107 442 aa2.56□□□□□ -2
SLD5YDR489W HXT2P23585 541 aa2.56□□□□□ -2
SLD5YDR489W MXR2P25566 168 aa2.56□□□□□ -2
SLD5YDR489W RPL16AP26784 199 aaKnown RBP2.56□□□□□ -2
SLD5YDR489W DEP1P31385 405 aa2.56□□□□□ -2
SLD5YDR489W PFS1P38872 237 aa2.56□□□□□ -2
SLD5YDR489W ATP22P50273 684 aaPredicted RBP2.56□□□□□ -2
SLD5YDR489W LSG1P53145 640 aaKnown RBP2.56□□□□□ -2
SLD5YDR489W HAL1Q01766 294 aa2.56□□□□□ -2
SLD5YDR489W CSM3Q04659 317 aa2.56□□□□□ -2
SLD5YDR489W LIP2Q06005 328 aa2.56□□□□□ -2
SLD5YDR489W UBA3Q99344 299 aa2.56□□□□□ -2
SLD5YDR489W COX4P04037 155 aa2.55□□□□□ -2
SLD5YDR489W RAD1P06777 1100 aa2.55□□□□□ -2
SLD5YDR489W UNG1P12887 359 aa2.55□□□□□ -2
SLD5YDR489W UTR1P21373 530 aa2.55□□□□□ -2
SLD5YDR489W ERG9P29704 444 aa2.55□□□□□ -2
SLD5YDR489W PMT2P31382 759 aa2.55□□□□□ -2
SLD5YDR489W UTH1P36135 365 aa2.55□□□□□ -2
SLD5YDR489W SHE1P38200 338 aa2.55□□□□□ -2
SLD5YDR489W YPT35P38815 214 aaKnown RBP2.55□□□□□ -2
SLD5YDR489W YHR182WP38870 785 aa2.55□□□□□ -2
SLD5YDR489W SCS7Q03529 384 aa2.55□□□□□ -2
SLD5YDR489W ENT5Q03769 411 aaKnown RBP2.55□□□□□ -2
SLD5YDR489W TRM82Q03774 444 aa2.55□□□□□ -2
SLD5YDR489W NAT4Q04751 285 aa2.55□□□□□ -2
SLD5YDR489W BSC6Q08280 497 aa2.55□□□□□ -2
SLD5YDR489W ALE1Q08548 619 aa2.55□□□□□ -2
SLD5YDR489W YOR376WQ08900 122 aa2.55□□□□□ -2
SLD5YDR489W STE7P06784 515 aa2.54□□□□□ -2
SLD5YDR489W MIR1P23641 311 aaKnown RBP2.54□□□□□ -2
SLD5YDR489W MKK1P32490 508 aa2.54□□□□□ -2
SLD5YDR489W TOA1P32773 286 aa2.54□□□□□ -2
SLD5YDR489W SRB2P34162 210 aa2.54□□□□□ -2
SLD5YDR489W MRPL27P36526 146 aaPredicted RBP2.54□□□□□ -2
SLD5YDR489W MRP21P38175 177 aa2.54□□□□□ -2
SLD5YDR489W RCK2P38623 610 aa2.54□□□□□ -2
SLD5YDR489W ALP1P38971 573 aa2.54□□□□□ -2
SLD5YDR489W HST1P53685 503 aa2.54□□□□□ -2
SLD5YDR489W SUR7P54003 302 aa2.54□□□□□ -2
SLD5YDR489W APC5Q08683 685 aa2.54□□□□□ -2
SLD5YDR489W FRE8Q12209 686 aa2.54□□□□□ -2
SLD5YDR489W SPO24Q3E752 67 aa2.54□□□□□ -2
SLD5YDR489W RNR2P09938 399 aaKnown RBP2.53□□□□□ -2
SLD5YDR489W ARF2P19146 181 aaKnown RBP2.53□□□□□ -2
SLD5YDR489W CMK2P22517 447 aa2.53□□□□□ -2
SLD5YDR489W LDS1P31379 325 aa2.53□□□□□ -2
SLD5YDR489W SLX1P38324 304 aa2.53□□□□□ -2
SLD5YDR489W RBG1P39729 369 aa2.53□□□□□ -2
SLD5YDR489W IGD1P43598 195 aa2.53□□□□□ -2
SLD5YDR489W YJR030CP47101 745 aa2.53□□□□□ -2
SLD5YDR489W NAS6P50086 228 aa2.53□□□□□ -2
SLD5YDR489W YPS5P53057 165 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms