RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	STN1	P38960	494 aa		5.46	□□□□□ -1.54
TRP1	YDR007W	PES4	P39684	611 aa		5.46	□□□□□ -1.54
TRP1	YDR007W	VPS52	P39904	641 aa		5.46	□□□□□ -1.54
TRP1	YDR007W	YER186C	P40101	306 aa		5.46	□□□□□ -1.54
TRP1	YDR007W	SMX2	P40204	77 aa	Known RBP	5.46	□□□□□ -1.54
TRP1	YDR007W	JLP2	P40206	208 aa		5.46	□□□□□ -1.54
TRP1	YDR007W	FAR7	P43592	221 aa		5.46	□□□□□ -1.54
TRP1	YDR007W	GUF1	P46943	645 aa		5.46	□□□□□ -1.54
TRP1	YDR007W	GLG2	P47011	380 aa		5.46	□□□□□ -1.54
TRP1	YDR007W	STP1	Q00947	519 aa		5.46	□□□□□ -1.54
TRP1	YDR007W	TAF12	Q03761	539 aa		5.46	□□□□□ -1.54
TRP1	YDR007W	YMR114C	Q04471	368 aa	Known RBP	5.46	□□□□□ -1.54
TRP1	YDR007W	VPS74	Q06385	345 aa		5.46	□□□□□ -1.54
TRP1	YDR007W	BRX1	Q08235	291 aa	Known RBP	5.46	□□□□□ -1.54
TRP1	YDR007W	REX4	Q08237	289 aa		5.46	□□□□□ -1.54
TRP1	YDR007W	DAS2	Q12084	232 aa		5.46	□□□□□ -1.54
TRP1	YDR007W	YDL009C	Q12210	107 aa		5.46	□□□□□ -1.54
TRP1	YDR007W	TY1B-NL2	Q99337	1749 aa	Known RBP	5.45	□□□□□ -1.54
TRP1	YDR007W	ATR1	P13090	542 aa		5.45	□□□□□ -1.54
TRP1	YDR007W	AMD1	P15274	810 aa	Known RBP	5.45	□□□□□ -1.54
TRP1	YDR007W	SPO12	P17123	173 aa		5.45	□□□□□ -1.54
TRP1	YDR007W	DBP3	P20447	523 aa	Known RBP	5.45	□□□□□ -1.54
TRP1	YDR007W	YCP4	P25349	247 aa	Known RBP	5.45	□□□□□ -1.54
TRP1	YDR007W	TPS2	P31688	896 aa	Known RBP	5.45	□□□□□ -1.54
TRP1	YDR007W	YET1	P35723	206 aa		5.45	□□□□□ -1.54
TRP1	YDR007W	FRE2	P36033	711 aa		5.45	□□□□□ -1.54
TRP1	YDR007W	MAK5	P38112	773 aa	Predicted RBP	5.45	□□□□□ -1.54
TRP1	YDR007W	GPI16	P38875	610 aa		5.45	□□□□□ -1.54
TRP1	YDR007W	ALD5	P40047	520 aa	Known RBP	5.45	□□□□□ -1.54
TRP1	YDR007W	AVT6	P40074	448 aa		5.45	□□□□□ -1.54
TRP1	YDR007W	ELP2	P42935	788 aa		5.45	□□□□□ -1.54
TRP1	YDR007W	SNZ3	P43545	298 aa		5.45	□□□□□ -1.54
TRP1	YDR007W	BNA3	P47039	444 aa	Known RBP	5.45	□□□□□ -1.54
TRP1	YDR007W	RPC17	P47076	161 aa		5.45	□□□□□ -1.54
TRP1	YDR007W	BIR1	P47134	954 aa		5.45	□□□□□ -1.54
TRP1	YDR007W	ASN2	P49090	572 aa	Known RBP	5.45	□□□□□ -1.54
TRP1	YDR007W	MRPL50	P53724	139 aa		5.45	□□□□□ -1.54
TRP1	YDR007W	SNZ2	P53824	298 aa		5.45	□□□□□ -1.54
TRP1	YDR007W	PDR16	P53860	351 aa	Known RBP	5.45	□□□□□ -1.54
TRP1	YDR007W	YNL040W	P53960	456 aa	Predicted RBP	5.45	□□□□□ -1.54
TRP1	YDR007W	GIP3	Q03016	1276 aa		5.45	□□□□□ -1.54
TRP1	YDR007W	RRP17	Q04031	235 aa	Predicted RBP	5.45	□□□□□ -1.54
TRP1	YDR007W	GPI17	Q04080	534 aa		5.45	□□□□□ -1.54
TRP1	YDR007W	SMD2	Q06217	110 aa	Known RBP	5.45	□□□□□ -1.54
TRP1	YDR007W	DTD1	Q07648	150 aa	Known RBP	5.45	□□□□□ -1.54
TRP1	YDR007W	YLL056C	Q12177	298 aa		5.45	□□□□□ -1.54
TRP1	YDR007W	NBL1	Q3E7Y6	73 aa		5.45	□□□□□ -1.54
TRP1	YDR007W	SRN2	Q99176	213 aa		5.45	□□□□□ -1.54
TRP1	YDR007W	APC1	P53886	1748 aa		5.45	□□□□□ -1.54
TRP1	YDR007W	ATP6	P00854	259 aa		5.44	□□□□□ -1.54
TRP1	YDR007W	YPT1	P01123	206 aa	Known RBP	5.44	□□□□□ -1.54
TRP1	YDR007W	DBF2	P22204	572 aa		5.44	□□□□□ -1.54
TRP1	YDR007W	ETR1	P38071	380 aa		5.44	□□□□□ -1.54
TRP1	YDR007W	SPC97	P38863	823 aa		5.44	□□□□□ -1.54
TRP1	YDR007W	MNL1	P38888	796 aa		5.44	□□□□□ -1.54
TRP1	YDR007W	RPH1	P39956	796 aa		5.44	□□□□□ -1.54
TRP1	YDR007W	HMS2	P47175	358 aa		5.44	□□□□□ -1.54
TRP1	YDR007W	GPI8	P49018	411 aa		5.44	□□□□□ -1.54
TRP1	YDR007W	YIP1	P53039	248 aa		5.44	□□□□□ -1.54
TRP1	YDR007W	TAF6	P53040	516 aa		5.44	□□□□□ -1.54
TRP1	YDR007W	RMR1	P53060	241 aa		5.44	□□□□□ -1.54
TRP1	YDR007W	YNL143C	P53908	130 aa		5.44	□□□□□ -1.54
TRP1	YDR007W	EGD1	Q02642	157 aa	Known RBP	5.44	□□□□□ -1.54
TRP1	YDR007W	CWC21	Q03375	135 aa	Known RBP	5.44	□□□□□ -1.54
TRP1	YDR007W	SPH1	Q06160	661 aa		5.44	□□□□□ -1.54
TRP1	YDR007W	ALE1	Q08548	619 aa		5.44	□□□□□ -1.54
TRP1	YDR007W	AFT2	Q08957	416 aa		5.44	□□□□□ -1.54
TRP1	YDR007W	YAR066W	P0CX18	203 aa		5.43	□□□□□ -1.54
TRP1	YDR007W	YHR214W	P0CX19	203 aa		5.43	□□□□□ -1.54
TRP1	YDR007W	CYS4	P32582	507 aa	Known RBP	5.43	□□□□□ -1.54
TRP1	YDR007W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.43	□□□□□ -1.54	not detected
TRP1	YDR007W	YBL010C	P32788	280 aa		5.43	□□□□□ -1.54
TRP1	YDR007W	MRPL17	P36528	281 aa		5.43	□□□□□ -1.54
TRP1	YDR007W	YCR041W	P37265	110 aa		5.43	□□□□□ -1.54
TRP1	YDR007W	KAP104	P38217	918 aa	Known RBP	5.43	□□□□□ -1.54
TRP1	YDR007W	YER034W	P40022	185 aa	Known RBP	5.43	□□□□□ -1.54
TRP1	YDR007W	YJL070C	P40361	888 aa		5.43	□□□□□ -1.54
TRP1	YDR007W	PCI8	P40512	444 aa		5.43	□□□□□ -1.54
TRP1	YDR007W	YPS6	P40583	537 aa		5.43	□□□□□ -1.54
TRP1	YDR007W	YNL320W	P42840	284 aa		5.43	□□□□□ -1.54
TRP1	YDR007W	EMC2	P47133	292 aa	Known RBP	5.43	□□□□□ -1.54
TRP1	YDR007W	MIG2	P53035	382 aa		5.43	□□□□□ -1.54
TRP1	YDR007W	RLI1	Q03195	608 aa	Known RBP	5.43	□□□□□ -1.54
TRP1	YDR007W	YDL109C	Q12103	647 aa		5.43	□□□□□ -1.54
TRP1	YDR007W	CDC21	P06785	304 aa		5.42	□□□□□ -1.54
TRP1	YDR007W	NFT1	P0CE68	1218 aa		5.42	□□□□□ -1.54
TRP1	YDR007W	KSS1	P14681	368 aa		5.42	□□□□□ -1.54
TRP1	YDR007W	CKA2	P19454	339 aa		5.42	□□□□□ -1.54
TRP1	YDR007W	ISY1	P21374	235 aa	Predicted RBP	5.42	□□□□□ -1.54
TRP1	YDR007W	CTR86	P25355	563 aa		5.42	□□□□□ -1.54
TRP1	YDR007W	YCR100C	P25606	316 aa		5.42	□□□□□ -1.54
TRP1	YDR007W	ICL1	P28240	557 aa	Predicted RBP	5.42	□□□□□ -1.54
TRP1	YDR007W	NDI1	P32340	513 aa		5.42	□□□□□ -1.54
TRP1	YDR007W	SIP2	P34164	415 aa	Known RBP	5.42	□□□□□ -1.54
TRP1	YDR007W	MYO3	P36006	1272 aa		5.42	□□□□□ -1.54
TRP1	YDR007W	RIM2	P38127	377 aa		5.42	□□□□□ -1.54
TRP1	YDR007W	SWC5	P38326	303 aa		5.42	□□□□□ -1.54
TRP1	YDR007W	INM1	P38710	295 aa		5.42	□□□□□ -1.54
TRP1	YDR007W	LYS1	P38998	373 aa	RIP-Chip data	5.42	□□□□□ -1.54	not detected
TRP1	YDR007W	YAL037W	P39728	267 aa		5.42	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms