RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C ADH1P00330 348 aaKnown RBP3.4□□□□□ -1.87
RRI1YDL216C SCH9P11792 824 aaKnown RBP3.4□□□□□ -1.87
RRI1YDL216C WSC4P38739 605 aa3.4□□□□□ -1.87
RRI1YDL216C LCP5P40079 357 aaPredicted RBP3.4□□□□□ -1.87
RRI1YDL216C CTK3P46963 296 aaPredicted RBP3.4□□□□□ -1.87
RRI1YDL216C YGR018CP53211 109 aa3.4□□□□□ -1.87
RRI1YDL216C YPL107WQ02873 248 aa3.4□□□□□ -1.87
RRI1YDL216C YLR177WQ06251 628 aa3.4□□□□□ -1.87
RRI1YDL216C YLH47Q06493 454 aa3.4□□□□□ -1.87
RRI1YDL216C LDB17Q12342 491 aa3.4□□□□□ -1.87
RRI1YDL216C DBR1P24309 405 aaKnown RBP3.39□□□□□ -1.87
RRI1YDL216C ANP1P32629 500 aa3.39□□□□□ -1.87
RRI1YDL216C ECT1P33412 323 aa3.39□□□□□ -1.87
RRI1YDL216C COS9P36034 407 aa3.39□□□□□ -1.87
RRI1YDL216C YNR068CP53754 272 aa3.39□□□□□ -1.87
RRI1YDL216C FRE6Q12473 712 aa3.39□□□□□ -1.87
RRI1YDL216C FSH3Q99369 266 aa3.39□□□□□ -1.87
RRI1YDL216C RPL23AP0CX41 137 aaKnown RBP3.38□□□□□ -1.87
RRI1YDL216C RPL23BP0CX42 137 aaKnown RBP3.38□□□□□ -1.87
RRI1YDL216C ASP3-2P0CX77 362 aa3.38□□□□□ -1.87
RRI1YDL216C ASP3-3P0CX78 362 aa3.38□□□□□ -1.87
RRI1YDL216C ASP3-4P0CX79 362 aa3.38□□□□□ -1.87
RRI1YDL216C ASP3-1P0CZ17 362 aa3.38□□□□□ -1.87
RRI1YDL216C DAP2P18962 818 aa3.38□□□□□ -1.87
RRI1YDL216C PHO84P25297 587 aaKnown RBP3.38□□□□□ -1.87
RRI1YDL216C TOA1P32773 286 aa3.38□□□□□ -1.87
RRI1YDL216C RPL21AQ02753 160 aaKnown RBP3.38□□□□□ -1.87
RRI1YDL216C ATP16Q12165 160 aa3.38□□□□□ -1.87
RRI1YDL216C RPL21BQ12672 160 aaKnown RBP3.38□□□□□ -1.87
RRI1YDL216C UNG1P12887 359 aa3.37□□□□□ -1.87
RRI1YDL216C THR4P16120 514 aaKnown RBP3.37□□□□□ -1.87
RRI1YDL216C RDS1P25611 832 aa3.37□□□□□ -1.87
RRI1YDL216C ZUO1P32527 433 aaKnown RBP3.37□□□□□ -1.87
RRI1YDL216C RPA34P47006 233 aaPredicted RBP3.37□□□□□ -1.87
RRI1YDL216C SEH1P53011 349 aaKnown RBP3.37□□□□□ -1.87
RRI1YDL216C FLC3P53121 802 aa3.37□□□□□ -1.87
RRI1YDL216C RNH201P53942 307 aa3.37□□□□□ -1.87
RRI1YDL216C AIM33Q04516 312 aa3.37□□□□□ -1.87
RRI1YDL216C YDR115WQ04598 105 aa3.37□□□□□ -1.87
RRI1YDL216C MIR1P23641 311 aaKnown RBP3.36□□□□□ -1.87
RRI1YDL216C GRR1P24814 1151 aa3.36□□□□□ -1.87
RRI1YDL216C CHL4P38907 458 aa3.36□□□□□ -1.87
RRI1YDL216C HEM14P40012 539 aa3.36□□□□□ -1.87
RRI1YDL216C YFL012WP43580 148 aa3.36□□□□□ -1.87
RRI1YDL216C YJR030CP47101 745 aa3.36□□□□□ -1.87
RRI1YDL216C UTP6Q02354 440 aaKnown RBP3.36□□□□□ -1.87
RRI1YDL216C GAS2Q06135 555 aa3.36□□□□□ -1.87
RRI1YDL216C NBL1Q3E7Y6 73 aa3.36□□□□□ -1.87
RRI1YDL216C DET1Q99288 334 aaKnown RBP3.36□□□□□ -1.87
RRI1YDL216C UBA3Q99344 299 aa3.36□□□□□ -1.87
RRI1YDL216C MAS1P10507 462 aa3.35□□□□□ -1.87
RRI1YDL216C HMX1P32339 317 aa3.35□□□□□ -1.87
RRI1YDL216C YBR241CP38142 488 aa3.35□□□□□ -1.87
RRI1YDL216C SHE3P38272 425 aaKnown RBP3.35□□□□□ -1.87
RRI1YDL216C AIM23P47015 356 aa3.35□□□□□ -1.87
RRI1YDL216C LST7P53237 242 aa3.35□□□□□ -1.87
RRI1YDL216C SLT2Q00772 484 aa3.35□□□□□ -1.87
RRI1YDL216C RNY1Q02933 434 aaKnown RBP3.35□□□□□ -1.87
RRI1YDL216C YMR310CQ04867 317 aaPredicted RBP3.35□□□□□ -1.87
RRI1YDL216C YOL075CQ08234 1294 aa3.35□□□□□ -1.87
RRI1YDL216C SFG1Q12507 346 aa3.35□□□□□ -1.87
RRI1YDL216C TPI1P00942 248 aaKnown RBP3.34□□□□□ -1.87
RRI1YDL216C FAR1P21268 830 aa3.34□□□□□ -1.87
RRI1YDL216C ADH5P38113 351 aaKnown RBP3.34□□□□□ -1.87
RRI1YDL216C YPT35P38815 214 aaKnown RBP3.34□□□□□ -1.87
RRI1YDL216C RBG1P39729 369 aa3.34□□□□□ -1.87
RRI1YDL216C SRO7Q12038 1033 aa3.34□□□□□ -1.87
RRI1YDL216C GLE1Q12315 538 aa3.34□□□□□ -1.87
RRI1YDL216C AIM45Q12480 344 aaKnown RBP3.34□□□□□ -1.87
RRI1YDL216C MON2P48563 1636 aaPredicted RBP3.33□□□□□ -1.88
RRI1YDL216C RPS16AP0CX51 143 aaKnown RBP3.33□□□□□ -1.88
RRI1YDL216C RPS16BP0CX52 143 aaKnown RBP3.33□□□□□ -1.88
RRI1YDL216C BLI1P35727 113 aa3.33□□□□□ -1.88
RRI1YDL216C LAS1P36146 502 aaPredicted RBP3.33□□□□□ -1.88
RRI1YDL216C SHE1P38200 338 aa3.33□□□□□ -1.88
RRI1YDL216C APE4P38821 490 aa3.33□□□□□ -1.88
RRI1YDL216C BIO3P50277 480 aa3.33□□□□□ -1.88
RRI1YDL216C YGR015CP53208 328 aa3.33□□□□□ -1.88
RRI1YDL216C SMP3Q04174 516 aa3.33□□□□□ -1.88
RRI1YDL216C IES4Q08561 116 aa3.33□□□□□ -1.88
RRI1YDL216C CKI1P20485 582 aa3.32□□□□□ -1.88
RRI1YDL216C PDC2P32896 925 aa3.32□□□□□ -1.88
RRI1YDL216C YJR054WP47114 497 aa3.32□□□□□ -1.88
RRI1YDL216C VEL1P53058 206 aa3.32□□□□□ -1.88
RRI1YDL216C YNL143CP53908 130 aa3.32□□□□□ -1.88
RRI1YDL216C DBP9Q06218 594 aaKnown RBP3.32□□□□□ -1.88
RRI1YDL216C PIN3Q06449 215 aa3.32□□□□□ -1.88
RRI1YDL216C RAX2Q12465 1220 aa3.32□□□□□ -1.88
RRI1YDL216C PUT4P15380 627 aa3.31□□□□□ -1.88
RRI1YDL216C ARF2P19146 181 aaKnown RBP3.31□□□□□ -1.88
RRI1YDL216C EPT1P22140 391 aa3.31□□□□□ -1.88
RRI1YDL216C PMT2P31382 759 aa3.31□□□□□ -1.88
RRI1YDL216C ECM34P38728 170 aa3.31□□□□□ -1.88
RRI1YDL216C YHR122WP38829 231 aa3.31□□□□□ -1.88
RRI1YDL216C YER184CP39961 794 aa3.31□□□□□ -1.88
RRI1YDL216C CDH1P53197 566 aa3.31□□□□□ -1.88
RRI1YDL216C TRM82Q03774 444 aa3.31□□□□□ -1.88
RRI1YDL216C APC5Q08683 685 aa3.31□□□□□ -1.88
RRI1YDL216C YOR376WQ08900 122 aa3.31□□□□□ -1.88
RRI1YDL216C RPS19AP07280 144 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms