RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W LOA1Q06508 300 aa1.64□□□□□ -2.15
SNF5YBR289W CDC50P25656 391 aa1.63□□□□□ -2.15
SNF5YBR289W TOA1P32773 286 aa1.63□□□□□ -2.15
SNF5YBR289W YMR134WP40207 237 aa1.63□□□□□ -2.15
SNF5YBR289W SEC27P41811 889 aaKnown RBP1.63□□□□□ -2.15
SNF5YBR289W CMS1Q07897 291 aaKnown RBP1.63□□□□□ -2.15
SNF5YBR289W MIM1Q08176 113 aa1.63□□□□□ -2.15
SNF5YBR289W PAA1Q12447 191 aaKnown RBP1.63□□□□□ -2.15
SNF5YBR289W RPL6BP05739 176 aaKnown RBP1.63□□□□□ -2.15
SNF5YBR289W DAL5P15365 543 aa1.63□□□□□ -2.15
SNF5YBR289W KAP104P38217 918 aaKnown RBP1.63□□□□□ -2.15
SNF5YBR289W SMF2P38778 549 aa1.63□□□□□ -2.15
SNF5YBR289W CHL4P38907 458 aa1.63□□□□□ -2.15
SNF5YBR289W COX14P39103 70 aa1.63□□□□□ -2.15
SNF5YBR289W RPA34P47006 233 aaPredicted RBP1.63□□□□□ -2.15
SNF5YBR289W TRF5P48561 642 aaKnown RBP1.63□□□□□ -2.15
SNF5YBR289W RIB4P50861 169 aaPredicted RBP1.63□□□□□ -2.15
SNF5YBR289W LSG1P53145 640 aaKnown RBP1.63□□□□□ -2.15
SNF5YBR289W RPL6AQ02326 176 aaKnown RBP1.63□□□□□ -2.15
SNF5YBR289W RMI1Q02685 241 aa1.63□□□□□ -2.15
SNF5YBR289W TRM82Q03774 444 aa1.63□□□□□ -2.15
SNF5YBR289W HHF1P02309 103 aaKnown RBP1.62□□□□□ -2.15
SNF5YBR289W GAL3P13045 520 aa1.62□□□□□ -2.15
SNF5YBR289W RTC2P38279 296 aa1.62□□□□□ -2.15
SNF5YBR289W MMS21P38632 267 aa1.62□□□□□ -2.15
SNF5YBR289W YJR054WP47114 497 aa1.62□□□□□ -2.15
SNF5YBR289W SPH1Q06160 661 aa1.62□□□□□ -2.15
SNF5YBR289W NDE2Q07500 545 aa1.62□□□□□ -2.15
SNF5YBR289W SMC5Q08204 1093 aa1.62□□□□□ -2.15
SNF5YBR289W ALE1Q08548 619 aa1.62□□□□□ -2.15
SNF5YBR289W SFM1Q12314 213 aa1.62□□□□□ -2.15
SNF5YBR289W WTM1Q12363 437 aaKnown RBP1.62□□□□□ -2.15
SNF5YBR289W RPL23AP0CX41 137 aaKnown RBP1.62□□□□□ -2.15
SNF5YBR289W RPL23BP0CX42 137 aaKnown RBP1.62□□□□□ -2.15
SNF5YBR289W DAL2P25335 343 aa1.62□□□□□ -2.15
SNF5YBR289W PDC2P32896 925 aa1.62□□□□□ -2.15
SNF5YBR289W PAD1P33751 242 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
SNF5YBR289W ATP3P38077 311 aaKnown RBP1.62□□□□□ -2.15
SNF5YBR289W SHE1P38200 338 aa1.62□□□□□ -2.15
SNF5YBR289W IML3P38265 245 aa1.62□□□□□ -2.15
SNF5YBR289W WSS1P38838 269 aa1.62□□□□□ -2.15
SNF5YBR289W YDR089WP38966 869 aa1.62□□□□□ -2.15
SNF5YBR289W PRP38Q00723 242 aaPredicted RBP1.62□□□□□ -2.15
SNF5YBR289W SMP3Q04174 516 aa1.62□□□□□ -2.15
SNF5YBR289W FAR10Q06001 478 aa1.62□□□□□ -2.15
SNF5YBR289W ATP16Q12165 160 aa1.62□□□□□ -2.15
SNF5YBR289W YDR262WQ12331 272 aa1.62□□□□□ -2.15
SNF5YBR289W JID1Q12350 301 aa1.62□□□□□ -2.15
SNF5YBR289W SPO24Q3E752 67 aa1.62□□□□□ -2.15
SNF5YBR289W SUP35P05453 685 aaKnown RBP1.61□□□□□ -2.15
SNF5YBR289W MAS1P10507 462 aa1.61□□□□□ -2.15
SNF5YBR289W SLM5P25345 492 aaKnown RBP1.61□□□□□ -2.15
SNF5YBR289W SMP1P38128 452 aa1.61□□□□□ -2.15
SNF5YBR289W GCD14P46959 383 aaPredicted RBP1.61□□□□□ -2.15
SNF5YBR289W YMR111CQ04461 462 aaPredicted RBP1.61□□□□□ -2.15
SNF5YBR289W YDR061WQ12298 539 aa1.61□□□□□ -2.15
SNF5YBR289W VPS63O13549 108 aa1.61□□□□□ -2.15
SNF5YBR289W RPS18AP0CX55 146 aaKnown RBP1.61□□□□□ -2.15
SNF5YBR289W RPS18BP0CX56 146 aaPredicted RBP1.61□□□□□ -2.15
SNF5YBR289W MIR1P23641 311 aaKnown RBP1.61□□□□□ -2.15
SNF5YBR289W PCL1P24867 279 aa1.61□□□□□ -2.15
SNF5YBR289W SMI1P32566 505 aa1.61□□□□□ -2.15
SNF5YBR289W ECT1P33412 323 aa1.61□□□□□ -2.15
SNF5YBR289W OM14P38325 134 aa1.61□□□□□ -2.15
SNF5YBR289W RCK1P38622 512 aa1.61□□□□□ -2.15
SNF5YBR289W ALP1P38971 573 aa1.61□□□□□ -2.15
SNF5YBR289W TIM17P39515 158 aa1.61□□□□□ -2.15
SNF5YBR289W OXA1P39952 402 aa1.61□□□□□ -2.15
SNF5YBR289W SDT1P53078 280 aa1.61□□□□□ -2.15
SNF5YBR289W YGL039WP53183 348 aaKnown RBP1.61□□□□□ -2.15
SNF5YBR289W DBP6P53734 629 aaKnown RBP1.61□□□□□ -2.15
SNF5YBR289W PEX27Q08580 376 aa1.61□□□□□ -2.15
SNF5YBR289W YDR018CQ12185 396 aa1.61□□□□□ -2.15
SNF5YBR289W YDL012CQ12489 107 aa1.61□□□□□ -2.15
SNF5YBR289W HEM4P06174 275 aa1.6□□□□□ -2.15
SNF5YBR289W PIS1P06197 220 aaKnown RBP1.6□□□□□ -2.15
SNF5YBR289W RVS161P25343 265 aaKnown RBP1.6□□□□□ -2.15
SNF5YBR289W COX13P32799 129 aa1.6□□□□□ -2.15
SNF5YBR289W BUD2P33314 1104 aa1.6□□□□□ -2.15
SNF5YBR289W SRB2P34162 210 aa1.6□□□□□ -2.15
SNF5YBR289W SPT10P35208 640 aa1.6□□□□□ -2.15
SNF5YBR289W DOA1P36037 715 aa1.6□□□□□ -2.15
SNF5YBR289W MRPL10P36520 322 aa1.6□□□□□ -2.15
SNF5YBR289W YIL029CP40538 142 aa1.6□□□□□ -2.15
SNF5YBR289W ATP22P50273 684 aaPredicted RBP1.6□□□□□ -2.15
SNF5YBR289W YMR010WQ03687 405 aa1.6□□□□□ -2.15
SNF5YBR289W LOT6Q07923 191 aa1.6□□□□□ -2.15
SNF5YBR289W BSC6Q08280 497 aa1.6□□□□□ -2.15
SNF5YBR289W DNL4Q08387 944 aaPredicted RBP1.6□□□□□ -2.15
SNF5YBR289W RRP36Q12481 300 aaPredicted RBP1.6□□□□□ -2.15
SNF5YBR289W TDH1P00360 332 aaKnown RBP1.6□□□□□ -2.15
SNF5YBR289W NAM2P11325 894 aa1.6□□□□□ -2.15
SNF5YBR289W DTR1P38125 572 aa1.6□□□□□ -2.15
SNF5YBR289W PET8P38921 284 aa1.6□□□□□ -2.15
SNF5YBR289W YGR015CP53208 328 aa1.6□□□□□ -2.15
SNF5YBR289W IRC25Q07951 179 aa1.6□□□□□ -2.15
SNF5YBR289W NBL1Q3E7Y6 73 aa1.6□□□□□ -2.15
SNF5YBR289W NAG1Q8TGN9 163 aa1.6□□□□□ -2.15
SNF5YBR289W REP1P03871 373 aa1.6□□□□□ -2.15
SNF5YBR289W REV1P12689 985 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 148.5 ms