RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	PSY3	Q12318	242 aa		5.28	□□□□□ -1.56
ATG12	YBR217W	MRX4	Q12467	430 aa		5.28	□□□□□ -1.56
ATG12	YBR217W	TSC13	Q99190	310 aa		5.28	□□□□□ -1.56
ATG12	YBR217W	YFR010W-A	P0C5N0	62 aa		5.27	□□□□□ -1.57
ATG12	YBR217W	CTA1	P15202	515 aa		5.27	□□□□□ -1.57
ATG12	YBR217W	LOT5	P34234	306 aa		5.27	□□□□□ -1.57
ATG12	YBR217W	TPO5	P36029	618 aa		5.27	□□□□□ -1.57
ATG12	YBR217W	APD1	P38281	316 aa		5.27	□□□□□ -1.57
ATG12	YBR217W	YHR097C	P38809	366 aa	Known RBP	5.27	□□□□□ -1.57
ATG12	YBR217W	YJR142W	P47173	342 aa		5.27	□□□□□ -1.57
ATG12	YBR217W	BUD9	P53226	547 aa		5.27	□□□□□ -1.57
ATG12	YBR217W	MEP3	P53390	489 aa		5.27	□□□□□ -1.57
ATG12	YBR217W	PDR16	P53860	351 aa	Known RBP	5.27	□□□□□ -1.57
ATG12	YBR217W	SNX41	Q04053	625 aa		5.27	□□□□□ -1.57
ATG12	YBR217W	PLM2	Q04383	521 aa		5.27	□□□□□ -1.57
ATG12	YBR217W	URC2	Q04411	772 aa		5.27	□□□□□ -1.57
ATG12	YBR217W	RNH202	Q05635	350 aa		5.27	□□□□□ -1.57
ATG12	YBR217W	DBP9	Q06218	594 aa	Known RBP	5.27	□□□□□ -1.57
ATG12	YBR217W	YLR352W	Q06479	807 aa		5.27	□□□□□ -1.57
ATG12	YBR217W	YOR214C	Q12282	236 aa		5.27	□□□□□ -1.57
ATG12	YBR217W	SUI3	P09064	285 aa	Known RBP	5.26	□□□□□ -1.57
ATG12	YBR217W	YHR214C-D	P0CX93	97 aa		5.26	□□□□□ -1.57
ATG12	YBR217W	ERD2	P18414	219 aa		5.26	□□□□□ -1.57
ATG12	YBR217W	PTC6	P25646	442 aa		5.26	□□□□□ -1.57
ATG12	YBR217W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	5.26	□□□□□ -1.57	not detected
ATG12	YBR217W	HBS1	P32769	611 aa	Known RBP	5.26	□□□□□ -1.57
ATG12	YBR217W	YBR241C	P38142	488 aa		5.26	□□□□□ -1.57
ATG12	YBR217W	GPI16	P38875	610 aa		5.26	□□□□□ -1.57
ATG12	YBR217W	REE1	P40893	198 aa		5.26	□□□□□ -1.57
ATG12	YBR217W	DIM1	P41819	318 aa	Known RBP	5.26	□□□□□ -1.57
ATG12	YBR217W	CAK1	P43568	368 aa	Predicted RBP	5.26	□□□□□ -1.57
ATG12	YBR217W	ECL1	P48235	211 aa		5.26	□□□□□ -1.57
ATG12	YBR217W	BPL1	P48445	690 aa	Predicted RBP	5.26	□□□□□ -1.57
ATG12	YBR217W	NUP57	P48837	541 aa		5.26	□□□□□ -1.57
ATG12	YBR217W	SHE4	P51534	789 aa		5.26	□□□□□ -1.57
ATG12	YBR217W	MPC1	P53157	130 aa	Known RBP	5.26	□□□□□ -1.57
ATG12	YBR217W	YGR016W	P53209	190 aa		5.26	□□□□□ -1.57
ATG12	YBR217W	RHO5	P53879	331 aa	Known RBP	5.26	□□□□□ -1.57
ATG12	YBR217W	RRN5	Q02983	363 aa		5.26	□□□□□ -1.57
ATG12	YBR217W	EKI1	Q03764	534 aa		5.26	□□□□□ -1.57
ATG12	YBR217W	BUR2	Q05949	395 aa		5.26	□□□□□ -1.57
ATG12	YBR217W	HDA2	Q06629	674 aa		5.26	□□□□□ -1.57
ATG12	YBR217W	RDR1	Q08904	546 aa		5.26	□□□□□ -1.57
ATG12	YBR217W	SWM1	Q12379	170 aa		5.26	□□□□□ -1.57
ATG12	YBR217W	MTR10	Q99189	972 aa		5.26	□□□□□ -1.57
ATG12	YBR217W	YOL087C	Q99247	1116 aa		5.26	□□□□□ -1.57
ATG12	YBR217W	SIR3	P06701	978 aa		5.25	□□□□□ -1.57
ATG12	YBR217W	PHO2	P07269	559 aa		5.25	□□□□□ -1.57
ATG12	YBR217W	ERG9	P29704	444 aa		5.25	□□□□□ -1.57
ATG12	YBR217W	ATS1	P31386	333 aa		5.25	□□□□□ -1.57
ATG12	YBR217W	CDC3	P32457	520 aa	Known RBP	5.25	□□□□□ -1.57
ATG12	YBR217W	HIR2	P32480	875 aa		5.25	□□□□□ -1.57
ATG12	YBR217W	MTC4	P38335	694 aa	Known RBP	5.25	□□□□□ -1.57
ATG12	YBR217W	PRY1	P47032	299 aa		5.25	□□□□□ -1.57
ATG12	YBR217W	MRK1	P50873	501 aa		5.25	□□□□□ -1.57
ATG12	YBR217W	RMR1	P53060	241 aa		5.25	□□□□□ -1.57
ATG12	YBR217W	RPN14	P53196	417 aa		5.25	□□□□□ -1.57
ATG12	YBR217W	YNL092W	P53934	400 aa		5.25	□□□□□ -1.57
ATG12	YBR217W	YSA1	Q01976	231 aa		5.25	□□□□□ -1.57
ATG12	YBR217W	SDC1	Q03323	175 aa		5.25	□□□□□ -1.57
ATG12	YBR217W	YDR249C	Q03787	373 aa		5.25	□□□□□ -1.57
ATG12	YBR217W	RSA1	Q08932	381 aa		5.25	□□□□□ -1.57
ATG12	YBR217W	BAG7	Q12128	409 aa		5.25	□□□□□ -1.57
ATG12	YBR217W	YRA1	Q12159	226 aa	Known RBP	5.25	□□□□□ -1.57
ATG12	YBR217W	DFG16	Q99234	619 aa		5.25	□□□□□ -1.57
ATG12	YBR217W	Q0144	Q9ZZW2	109 aa		5.25	□□□□□ -1.57
ATG12	YBR217W	CDC4	P07834	779 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	YOL163W	P0CF20	169 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	STE6	P12866	1290 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	YCR100C	P25606	316 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	ITR2	P30606	609 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	ARC19	P33204	171 aa	Known RBP	5.24	□□□□□ -1.57
ATG12	YBR217W	MDL1	P33310	695 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	LHS1	P36016	881 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	SPC34	P36131	295 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	YKR073C	P36153	106 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	YHL012W	P38709	493 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	RRP4	P38792	359 aa	Known RBP	5.24	□□□□□ -1.57
ATG12	YBR217W	YER010C	P40011	234 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	SHO1	P40073	367 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	IMD4	P50094	524 aa	Known RBP	5.24	□□□□□ -1.57
ATG12	YBR217W	BSC5	P53755	489 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	COX20	Q04935	205 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	FMP45	Q07651	309 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	NOP12	Q08208	459 aa	Known RBP	5.24	□□□□□ -1.57
ATG12	YBR217W	CRT10	Q08226	957 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	ENB1	Q08299	606 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	SKI7	Q08491	747 aa	Predicted RBP	5.24	□□□□□ -1.57
ATG12	YBR217W	MCP1	Q12106	302 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	YOL159C-A	Q3E769	90 aa		5.24	□□□□□ -1.57
ATG12	YBR217W	FLO9	P39712	1322 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	SNF4	P12904	322 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	CLB4	P24871	460 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	NFS1	P25374	497 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	UBC8	P28263	218 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	YKL077W	P36081	392 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	SRO77	P38163	1010 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	YHR180W	P38868	163 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	RIX1	P38883	763 aa	Predicted RBP	5.23	□□□□□ -1.57
ATG12	YBR217W	RCY1	P39531	840 aa		5.23	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms