RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W HEM4P06174 275 aa5.24□□□□□ -1.57
SHP1YBL058W HTS1P07263 546 aaKnown RBP5.24□□□□□ -1.57
SHP1YBL058W RNA1P11745 407 aaKnown RBP5.24□□□□□ -1.57
SHP1YBL058W PDA1P16387 420 aaKnown RBP5.24□□□□□ -1.57
SHP1YBL058W MDH2P22133 377 aa5.24□□□□□ -1.57
SHP1YBL058W YCR051WP25631 222 aa5.24□□□□□ -1.57
SHP1YBL058W EHD3P28817 500 aa5.24□□□□□ -1.57
SHP1YBL058W TOD6P34219 525 aa5.24□□□□□ -1.57
SHP1YBL058W EXO84P38261 753 aa5.24□□□□□ -1.57
SHP1YBL058W SHO1P40073 367 aa5.24□□□□□ -1.57
SHP1YBL058W GAB1P41733 394 aa5.24□□□□□ -1.57
SHP1YBL058W SMK1P41808 388 aa5.24□□□□□ -1.57
SHP1YBL058W LEM3P42838 414 aa5.24□□□□□ -1.57
SHP1YBL058W MRM2P53123 320 aa5.24□□□□□ -1.57
SHP1YBL058W LSG1P53145 640 aaKnown RBP5.24□□□□□ -1.57
SHP1YBL058W HAS1Q03532 505 aaKnown RBP5.24□□□□□ -1.57
SHP1YBL058W SNX41Q04053 625 aa5.24□□□□□ -1.57
SHP1YBL058W URC2Q04411 772 aa5.24□□□□□ -1.57
SHP1YBL058W SFH1Q06168 426 aa5.24□□□□□ -1.57
SHP1YBL058W ARR1Q06596 294 aa5.24□□□□□ -1.57
SHP1YBL058W PML1Q07930 204 aaPredicted RBP5.24□□□□□ -1.57
SHP1YBL058W SOG2Q08817 791 aa5.24□□□□□ -1.57
SHP1YBL058W GRE1Q08969 168 aa5.24□□□□□ -1.57
SHP1YBL058W NPC2Q12408 173 aa5.24□□□□□ -1.57
SHP1YBL058W ZWF1P11412 505 aaKnown RBP5.23□□□□□ -1.57
SHP1YBL058W RAP1P11938 827 aa5.23□□□□□ -1.57
SHP1YBL058W PHO91P27514 894 aa5.23□□□□□ -1.57
SHP1YBL058W PRS3P38689 320 aaKnown RBP5.23□□□□□ -1.57
SHP1YBL058W ARN1P38731 627 aa5.23□□□□□ -1.57
SHP1YBL058W YFL051CP43552 160 aa5.23□□□□□ -1.57
SHP1YBL058W MSY1P48527 492 aa5.23□□□□□ -1.57
SHP1YBL058W TYW3P53177 273 aa5.23□□□□□ -1.57
SHP1YBL058W OGG1P53397 376 aaPredicted RBP5.23□□□□□ -1.57
SHP1YBL058W DCP2P53550 970 aaKnown RBP5.23□□□□□ -1.57
SHP1YBL058W TIM10P87108 93 aa5.23□□□□□ -1.57
SHP1YBL058W NUP116Q02630 1113 aa5.23□□□□□ -1.57
SHP1YBL058W NAN1Q02931 896 aaKnown RBP5.23□□□□□ -1.57
SHP1YBL058W RIM13Q03792 727 aa5.23□□□□□ -1.57
SHP1YBL058W RAD30Q04049 632 aa5.23□□□□□ -1.57
SHP1YBL058W API2Q04413 109 aa5.23□□□□□ -1.57
SHP1YBL058W RAF1Q06891 181 aa5.23□□□□□ -1.57
SHP1YBL058W AVO1Q08236 1176 aa5.23□□□□□ -1.57
SHP1YBL058W SPO24Q3E752 67 aa5.23□□□□□ -1.57
SHP1YBL058W Q0297Q9ZZV8 51 aa5.23□□□□□ -1.57
SHP1YBL058W URA2P07259 2214 aaKnown RBP5.23□□□□□ -1.57
SHP1YBL058W TY1A-LR4P0C2I8 440 aaKnown RBP5.22□□□□□ -1.57
SHP1YBL058W TY1A-DR6P0CX70 440 aa5.22□□□□□ -1.57
SHP1YBL058W TY1A-ER1P0CX71 440 aa5.22□□□□□ -1.57
SHP1YBL058W TY1A-LR2P0CX72 440 aa5.22□□□□□ -1.57
SHP1YBL058W TY1A-PLP0CX73 440 aa5.22□□□□□ -1.57
SHP1YBL058W TY1A-JR1P0CX74 440 aa5.22□□□□□ -1.57
SHP1YBL058W TY1A-LR3P0CX75 440 aa5.22□□□□□ -1.57
SHP1YBL058W TY1A-ML2P0CX76 440 aa5.22□□□□□ -1.57
SHP1YBL058W PHO81P17442 1178 aa5.22□□□□□ -1.57
SHP1YBL058W UTR1P21373 530 aa5.22□□□□□ -1.57
SHP1YBL058W YCK1P23291 538 aa5.22□□□□□ -1.57
SHP1YBL058W MRPL17P36528 281 aa5.22□□□□□ -1.57
SHP1YBL058W ARN2P38724 620 aa5.22□□□□□ -1.57
SHP1YBL058W AVT7P40501 490 aa5.22□□□□□ -1.57
SHP1YBL058W IMA1P53051 589 aa5.22□□□□□ -1.57
SHP1YBL058W DBP6P53734 629 aaKnown RBP5.22□□□□□ -1.57
SHP1YBL058W NOG1Q02892 647 aaKnown RBP5.22□□□□□ -1.57
SHP1YBL058W YPL039WQ03080 316 aa5.22□□□□□ -1.57
SHP1YBL058W CTL1Q03220 320 aaKnown RBP5.22□□□□□ -1.57
SHP1YBL058W EKI1Q03764 534 aa5.22□□□□□ -1.57
SHP1YBL058W SSQ1Q05931 657 aaPredicted RBP5.22□□□□□ -1.57
SHP1YBL058W DCI1Q08558 271 aa5.22□□□□□ -1.57
SHP1YBL058W YIG1Q08956 461 aa5.22□□□□□ -1.57
SHP1YBL058W TY1A-GR1Q12085 440 aa5.22□□□□□ -1.57
SHP1YBL058W RPN6Q12377 434 aa5.22□□□□□ -1.57
SHP1YBL058W DBP10Q12389 995 aaKnown RBP5.22□□□□□ -1.57
SHP1YBL058W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.22□□□□□ -1.57
SHP1YBL058W TY1A-OLQ92392 440 aaKnown RBP5.22□□□□□ -1.57
SHP1YBL058W PRB1P09232 635 aa5.21□□□□□ -1.58
SHP1YBL058W THR1P17423 357 aaKnown RBP5.21□□□□□ -1.58
SHP1YBL058W RPC19P28000 142 aaKnown RBP5.21□□□□□ -1.58
SHP1YBL058W YKL187CP34231 750 aa5.21□□□□□ -1.58
SHP1YBL058W TEF4P36008 412 aaKnown RBP5.21□□□□□ -1.58
SHP1YBL058W MRPL39P36533 70 aa5.21□□□□□ -1.58
SHP1YBL058W DTR1P38125 572 aa5.21□□□□□ -1.58
SHP1YBL058W ECM34P38728 170 aa5.21□□□□□ -1.58
SHP1YBL058W MTC6P38849 526 aa5.21□□□□□ -1.58
SHP1YBL058W RGI1P40043 161 aaPredicted RBP5.21□□□□□ -1.58
SHP1YBL058W GPP1P41277 250 aaKnown RBP5.21□□□□□ -1.58
SHP1YBL058W COS6P53344 381 aa5.21□□□□□ -1.58
SHP1YBL058W RSN1Q03516 953 aa5.21□□□□□ -1.58
SHP1YBL058W YKU80Q04437 629 aa5.21□□□□□ -1.58
SHP1YBL058W MRPL1Q04599 285 aa5.21□□□□□ -1.58
SHP1YBL058W ATG38Q05789 226 aaKnown RBP5.21□□□□□ -1.58
SHP1YBL058W TMC1Q08422 150 aaPredicted RBP5.21□□□□□ -1.58
SHP1YBL058W YOR214CQ12282 236 aa5.21□□□□□ -1.58
SHP1YBL058W PSY3Q12318 242 aa5.21□□□□□ -1.58
SHP1YBL058W GPM1P00950 247 aaKnown RBP5.2□□□□□ -1.58
SHP1YBL058W TFS1P14306 219 aa5.2□□□□□ -1.58
SHP1YBL058W MER1P16523 270 aa5.2□□□□□ -1.58
SHP1YBL058W CCA1P21269 546 aa5.2□□□□□ -1.58
SHP1YBL058W LHP1P33399 275 aaKnown RBP5.2□□□□□ -1.58
SHP1YBL058W MRPS5P33759 307 aa5.2□□□□□ -1.58
SHP1YBL058W MTC4P38335 694 aaKnown RBP5.2□□□□□ -1.58
SHP1YBL058W YHL012WP38709 493 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms