RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 BAZ2AQ9UIF9 1905 aaKnown RBP14.89□□□□□ -0.03
SCARB2-227ENST00000640957 SFI1A8K8P3 1242 aa14.89□□□□□ -0.03
SCARB2-227ENST00000640957 PYGLP06737 847 aa14.89□□□□□ -0.03
SCARB2-227ENST00000640957 MTMR3Q13615 1198 aa14.89□□□□□ -0.03
SCARB2-227ENST00000640957 UBE2SQ16763 222 aa14.89□□□□□ -0.03
SCARB2-227ENST00000640957 CLEC10AQ8IUN9 316 aa14.89□□□□□ -0.03
SCARB2-227ENST00000640957 RUBCNQ92622 972 aa14.89□□□□□ -0.03
SCARB2-227ENST00000640957 TSC22D3Q99576 134 aa14.89□□□□□ -0.03
SCARB2-227ENST00000640957 KCNQ5Q9NR82 932 aa14.89□□□□□ -0.03
SCARB2-227ENST00000640957 EP400Q96L91 3159 aa14.89□□□□□ -0.03
SCARB2-227ENST00000640957 PNPLA7Q6ZV29 1317 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 IGSF9BQ9UPX0 1349 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 KDM4FA0A1W2PPD8 638 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 DDAH1O94760 285 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 NTSR2O95665 410 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 KIF5BP33176 963 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 SEMA3FQ13275 785 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 CALCRLQ16602 461 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 SLC30A10Q6XR72 485 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 BARGINQ6ZT62 677 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 TTC8Q8TAM2 541 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 CRAMP1Q96RY5 1269 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 DCP1AQ9NPI6 582 aaPredicted RBP14.88□□□□□ -0.03
SCARB2-227ENST00000640957 HAO1Q9UJM8 370 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 PCDHB13Q9Y5F0 798 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 GOLGA6L10A0A0M3HER8 536 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 TCRBV7S2A1N4TA0A589 114 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 TMEM120BA0PK00 339 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 KLRF2D3W0D1 207 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 SNX3O60493 162 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 ATP11AP98196 1134 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 FKBP3Q00688 224 aaKnown RBP14.88□□□□□ -0.03
SCARB2-227ENST00000640957 PIGWQ7Z7B1 504 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 LINC00116Q8NCU8 138 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 ELMO3Q96BJ8 720 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 NAF1Q96HR8 494 aaKnown RBP14.88□□□□□ -0.03
SCARB2-227ENST00000640957 RPS6KC1Q96S38 1066 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 PIGSQ96S52 555 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 MYH7P12883 1935 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 ATRNO75882 1429 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 C6orf229H3BNL8 230 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 ENTPD5O75356 428 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 PIAS1O75925 651 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 SNUPNO95149 360 aaKnown RBP14.88□□□□□ -0.03
SCARB2-227ENST00000640957 FGFR1OPO95684 399 aaKnown RBP14.88□□□□□ -0.03
SCARB2-227ENST00000640957 RFC4P35249 363 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 RFC5P40937 340 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 CASP5P51878 434 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 COPS2P61201 443 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 LACTBP83111 547 aaPredicted RBP14.88□□□□□ -0.03
SCARB2-227ENST00000640957 COASYQ13057 564 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 NONOQ15233 471 aaKnown RBP eCLIP14.88□□□□□ -0.03
SCARB2-227ENST00000640957 ARHGAP44Q17R89 818 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 DCAF12L1Q5VU92 463 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 ZNF746Q6NUN9 644 aaPredicted RBP14.88□□□□□ -0.03
SCARB2-227ENST00000640957 PHLDB2Q86SQ0 1253 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 SUPT20HQ8NEM7 779 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 UCMAQ8WVF2 138 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 TLCD1Q96CP7 247 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 SYT15Q9BQS2 421 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 ETAA1Q9NY74 926 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 TAS2R14Q9NYV8 317 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 DLGAP2Q9P1A6 1054 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 ZFATQ9P243 1243 aa14.88□□□□□ -0.03
SCARB2-227ENST00000640957 STXBP3O00186 592 aa14.87□□□□□ -0.03
SCARB2-227ENST00000640957 RASGRF2O14827 1237 aa14.87□□□□□ -0.03
SCARB2-227ENST00000640957 LRRN2O75325 713 aa14.87□□□□□ -0.03
SCARB2-227ENST00000640957 LDHBP07195 334 aaKnown RBP14.87□□□□□ -0.03
SCARB2-227ENST00000640957 GALCP54803 685 aa14.87□□□□□ -0.03
SCARB2-227ENST00000640957 RBBP5Q15291 538 aaKnown RBP14.87□□□□□ -0.03
SCARB2-227ENST00000640957 C11orf91Q3C1V1 193 aa14.87□□□□□ -0.03
SCARB2-227ENST00000640957 FAM26FQ5R3K3 315 aa14.87□□□□□ -0.03
SCARB2-227ENST00000640957 RBM26Q5T8P6 1007 aaKnown RBP14.87□□□□□ -0.03
SCARB2-227ENST00000640957 UNC13DQ70J99 1090 aa14.87□□□□□ -0.03
SCARB2-227ENST00000640957 TRMT1LQ7Z2T5 733 aaKnown RBP14.87□□□□□ -0.03
SCARB2-227ENST00000640957 HOOK3Q86VS8 718 aa14.87□□□□□ -0.03
SCARB2-227ENST00000640957 PALB2Q86YC2 1186 aa14.87□□□□□ -0.03
SCARB2-227ENST00000640957 RDH13Q8NBN7 331 aa14.87□□□□□ -0.03
SCARB2-227ENST00000640957 MAGEC3Q8TD91 643 aa14.87□□□□□ -0.03
SCARB2-227ENST00000640957 ZNF512BQ96KM6 892 aaPredicted RBP14.87□□□□□ -0.03
SCARB2-227ENST00000640957 DDX50Q9BQ39 737 aaKnown RBP14.87□□□□□ -0.03
SCARB2-227ENST00000640957 CCNL1Q9UK58 526 aaPredicted RBP14.87□□□□□ -0.03
SCARB2-227ENST00000640957 USP15Q9Y4E8 981 aaPredicted RBP14.87□□□□□ -0.03
SCARB2-227ENST00000640957 GHRP10912 638 aa14.87□□□□□ -0.03
SCARB2-227ENST00000640957 NR2F2P24468 414 aa14.87□□□□□ -0.03
SCARB2-227ENST00000640957 ADCY2Q08462 1091 aa14.87□□□□□ -0.03
SCARB2-227ENST00000640957 ZNF268Q14587 947 aaPredicted RBP14.87□□□□□ -0.03
SCARB2-227ENST00000640957 SLC30A9Q6PML9 568 aa14.87□□□□□ -0.03
SCARB2-227ENST00000640957 NEK8Q86SG6 692 aa14.87□□□□□ -0.03
SCARB2-227ENST00000640957 VSIG1Q86XK7 387 aa14.87□□□□□ -0.03
SCARB2-227ENST00000640957 PAPOLBQ9NRJ5 636 aaKnown RBP14.87□□□□□ -0.03
SCARB2-227ENST00000640957 ATMINO43313 823 aaPredicted RBP14.86□□□□□ -0.03
SCARB2-227ENST00000640957 UCHL3P15374 230 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 STAT3P40763 770 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 CASP4P49662 377 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 KCNA1Q09470 495 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 MPP2Q14168 576 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 MEX3CQ5U5Q3 659 aaKnown RBP14.86□□□□□ -0.03
SCARB2-227ENST00000640957 EXOC3L1Q86VI1 746 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 LRRC57Q8N9N7 239 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms