RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 APOL5Q9BWW9 433 aa4.26□□□□□ -1.73
CCDC7-213ENST00000639290 STK31Q9BXU1 1019 aa4.26□□□□□ -1.73
CCDC7-213ENST00000639290 DNAJC18Q9H819 358 aa4.26□□□□□ -1.73
CCDC7-213ENST00000639290 ENTPD7Q9NQZ7 604 aa4.26□□□□□ -1.73
CCDC7-213ENST00000639290 PPP1R9AQ9ULJ8 1098 aa4.26□□□□□ -1.73
CCDC7-213ENST00000639290 ADAMTS8Q9UP79 889 aa4.26□□□□□ -1.73
CCDC7-213ENST00000639290 AKAP13Q12802 2813 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 MYH15Q9Y2K3 1946 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 TTC3P53804 2025 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 DMXL2Q8TDJ6 3036 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 FAM196BA6NMK8 535 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 NEURL1BA8MQ27 555 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 DDAH2O95865 285 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 GH2P01242 217 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 KRT17Q04695 432 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 CCDC57Q2TAC2 916 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 PROX2Q3B8N5 592 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 PLK5Q496M5 336 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 TAF7LQ5H9L4 462 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 DGKKQ5KSL6 1271 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 SPNS3Q6ZMD2 512 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 CABP7Q86V35 215 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 HDDC3Q8N4P3 179 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 COLGALT1Q8NBJ5 622 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 CLSTN3Q9BQT9 956 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 PNNQ9H307 717 aaKnown RBP4.25□□□□□ -1.73
CCDC7-213ENST00000639290 POLMQ9NP87 494 aaPredicted RBP4.25□□□□□ -1.73
CCDC7-213ENST00000639290 CUEDC1Q9NWM3 386 aaPredicted RBP4.25□□□□□ -1.73
CCDC7-213ENST00000639290 MTF2Q9Y483 593 aaPredicted RBP4.25□□□□□ -1.73
CCDC7-213ENST00000639290 KALRNO60229 2985 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 MCM3APO60318 1980 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 NAV1Q8NEY1 1877 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 TRABD2BA6NFA1 517 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 C2orf71A6NGG8 1288 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 PYCARD-AS1I3L0S3 204 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 CDK4P11802 303 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 LAMP2P13473 410 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 PRDX5P30044 214 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 GBP2P32456 591 aaPredicted RBP4.25□□□□□ -1.73
CCDC7-213ENST00000639290 TLE3Q04726 772 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 LMOD3Q0VAK6 560 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 PTGDRQ13258 359 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 MAPK6Q16659 721 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 PLPP4Q5VZY2 271 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 KSR2Q6VAB6 950 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 DZIP1Q86YF9 867 aaKnown RBP4.25□□□□□ -1.73
CCDC7-213ENST00000639290 LINC01465Q8N7H1 131 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 DNAJC2Q99543 621 aaKnown RBP4.25□□□□□ -1.73
CCDC7-213ENST00000639290 SEMA4CQ9C0C4 833 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 TMPRSS4Q9NRS4 437 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 KNSTRNQ9Y448 316 aa4.25□□□□□ -1.73
CCDC7-213ENST00000639290 LAMA4Q16363 1823 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 COL4A2P08572 1712 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 MYO7AQ13402 2215 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 TRIM6-TRIM34B2RNG4 842 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 HAS3O00219 553 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 IGKV5-2P06315 115 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 ITPKBP27987 946 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 HOXC8P31273 242 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 SATB1Q01826 763 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 SNW1Q13573 536 aaKnown RBP4.24□□□□□ -1.73
CCDC7-213ENST00000639290 TPRG1Q6ZUI0 275 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 KBTBD6Q86V97 674 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 CACTIN-AS1Q8N1I8 211 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 C7orf31Q8N865 590 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 MPHOSPH6Q99547 160 aaKnown RBP4.24□□□□□ -1.73
CCDC7-213ENST00000639290 NUSAP1Q9BXS6 441 aaKnown RBP4.24□□□□□ -1.73
CCDC7-213ENST00000639290 MAF1Q9H063 256 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 KIAA1468Q9P260 1216 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 ENPP3O14638 875 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 SIX3O95343 332 aaPredicted RBP4.24□□□□□ -1.73
CCDC7-213ENST00000639290 MS4A1P11836 297 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 FGFR2P21802 821 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 CXADRP78310 365 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 SRSF11Q05519 484 aaKnown RBP4.24□□□□□ -1.73
CCDC7-213ENST00000639290 RTP5Q14D33 572 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 PUM3Q15397 648 aaKnown RBP4.24□□□□□ -1.73
CCDC7-213ENST00000639290 TRIP6Q15654 476 aaKnown RBP4.24□□□□□ -1.73
CCDC7-213ENST00000639290 CCDC27Q2M243 656 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 ABCB5Q2M3G0 1257 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 UBE3BQ7Z3V4 1068 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 THNSL1Q8IYQ7 743 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 ANKRD35Q8N283 1001 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 CAMKK1Q8N5S9 505 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 DDX12PQ92771 950 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 ZFRQ96KR1 1074 aaKnown RBP4.24□□□□□ -1.73
CCDC7-213ENST00000639290 DNAAF2Q9NVR5 837 aaKnown RBP4.24□□□□□ -1.73
CCDC7-213ENST00000639290 TMEM260Q9NX78 707 aa4.24□□□□□ -1.73
CCDC7-213ENST00000639290 MAP3K7O43318 606 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 PDE8BO95263 885 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 POU2F2P09086 479 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 CASTP20810 708 aaKnown RBP4.23□□□□□ -1.73
CCDC7-213ENST00000639290 ACTN2P35609 894 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 PEAR1Q5VY43 1037 aaPredicted RBP4.23□□□□□ -1.73
CCDC7-213ENST00000639290 PACS2Q86VP3 889 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 VGLL2Q8N8G2 317 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 RSAD2Q8WXG1 361 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 NRSN2Q9GZP1 204 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 VCPKMTQ9H867 229 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 CBX8Q9HC52 389 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms