RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 NLGN4XQ8N0W4 816 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 SUPT20HQ8NEM7 779 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 CPT1CQ8TCG5 803 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 PRDM13Q9H4Q3 707 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 METTL5Q9NRN9 209 aaKnown RBP2.43□□□□□ -2.02
SCN1A-215ENST00000637285 SORCS3Q9UPU3 1222 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 COL4A3Q01955 1670 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 AOAHP28039 575 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 ADCY7P51828 1080 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 USP14P54578 494 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 KRTAP10-6P60371 365 aaPredicted RBP2.42□□□□□ -2.02
SCN1A-215ENST00000637285 GPR85P60893 370 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 GPR162Q16538 588 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 CCDC27Q2M243 656 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 FKBP15Q5T1M5 1219 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 KANK2Q63ZY3 851 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 ANKRD53Q8N9V6 530 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 RASGRP4Q8TDF6 673 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 DCAF4Q8WV16 495 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 FAM193BQ96PV7 902 aaPredicted RBP2.42□□□□□ -2.02
SCN1A-215ENST00000637285 GPHA2Q96T91 129 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 TCF25Q9BQ70 676 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 BRIP1Q9BX63 1249 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 AMNQ9BXJ7 453 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 SLC29A3Q9BZD2 475 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 OR10A5Q9H207 317 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 BTBD7Q9P203 1132 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 SRPK3Q9UPE1 567 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 CTDP1Q9Y5B0 961 aaPredicted RBP2.42□□□□□ -2.02
SCN1A-215ENST00000637285 RBM8AQ9Y5S9 174 aaKnown RBP2.42□□□□□ -2.02
SCN1A-215ENST00000637285 ATP23Q9Y6H3 246 aa2.42□□□□□ -2.02
SCN1A-215ENST00000637285 BLACEA4D250 179 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 AGRPO00253 132 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 KCNK3O14649 394 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 SMAD7O15105 426 aaKnown RBP2.41□□□□□ -2.02
SCN1A-215ENST00000637285 PPFIA4O75335 1185 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 SCAF4O95104 1147 aaKnown RBP2.41□□□□□ -2.02
SCN1A-215ENST00000637285 MPIG6BO95866 241 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 KRT15P19012 456 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 BPIFB4P59827 614 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 PLEKHG4Q58EX7 1191 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 MRM1Q6IN84 353 aaKnown RBP2.41□□□□□ -2.02
SCN1A-215ENST00000637285 Q6YL49 198 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 PTRH1Q86Y79 214 aaKnown RBP2.41□□□□□ -2.02
SCN1A-215ENST00000637285 IFNL3Q8IZI9 196 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 LCORLQ8N3X6 602 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 SMG7Q92540 1137 aaKnown RBP2.41□□□□□ -2.02
SCN1A-215ENST00000637285 GCDHQ92947 438 aaPredicted RBP2.41□□□□□ -2.02
SCN1A-215ENST00000637285 ALG1Q9BT22 464 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 SPATA5L1Q9BVQ7 753 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 SLC6A15Q9H2J7 730 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 CATSPERZQ9NTU4 200 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 ACTR10Q9NZ32 417 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 ANKFY1Q9P2R3 1169 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 SFMBT1Q9UHJ3 866 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 MAGEL2Q9UJ55 1249 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 FRMD4BQ9Y2L6 1034 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 INSL6Q9Y581 213 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 HS3ST4Q9Y661 456 aa2.41□□□□□ -2.02
SCN1A-215ENST00000637285 CENPVL1A0A0U1RR11 272 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 A0A1W2PQU0 124 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 GRXCR1A8MXD5 290 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 MAN2B1O00754 1011 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 LPXNO60711 386 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 MFAP3LO75121 409 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 H2AFYO75367 372 aaKnown RBP2.4□□□□□ -2.03
SCN1A-215ENST00000637285 ONECUT2O95948 504 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 C4BPAP04003 597 aaKnown RBP2.4□□□□□ -2.03
SCN1A-215ENST00000637285 CAPNS1P04632 268 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 LAG3P18627 525 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 ZEB1P37275 1124 aaPredicted RBP2.4□□□□□ -2.03
SCN1A-215ENST00000637285 ST5P78524 1137 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 TAP1Q03518 808 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 GPR19Q15760 415 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 ERCC6LQ2NKX8 1250 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 C1QL3Q5VWW1 255 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 KLHDC10Q6PID8 442 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 LRP10Q7Z4F1 713 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 OSTM1Q86WC4 334 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 CMTR2Q8IYT2 770 aaKnown RBP2.4□□□□□ -2.03
SCN1A-215ENST00000637285 ZNF366Q8N895 744 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 BOLLQ8N9W6 283 aaKnown RBP2.4□□□□□ -2.03
SCN1A-215ENST00000637285 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.4□□□□□ -2.03
SCN1A-215ENST00000637285 SCARB1Q8WTV0 552 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 NELL1Q92832 810 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 LPPQ93052 612 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 CAVIN3Q969G5 261 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 ARL8AQ96BM9 186 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 SLC7A6OSQ96CW6 309 aaPredicted RBP2.4□□□□□ -2.03
SCN1A-215ENST00000637285 C16orf92Q96LL3 132 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 ZFYVE21Q9BQ24 234 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 WDR11Q9BZH6 1224 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 SERHL2Q9H4I8 314 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 IL23AQ9NPF7 189 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 NCDNQ9UBB6 729 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 RCAN3Q9UKA8 241 aa2.4□□□□□ -2.03
SCN1A-215ENST00000637285 PRAMEF22A3QJZ6 481 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 C2orf78A6NCI8 922 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 ZNF185O15231 689 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 PRODHO43272 600 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms