RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 KYAT1Q16773 422 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 APOBEC3FQ8IUX4 373 aaKnown RBP5.93□□□□□ -1.46
SCN1A-209ENST00000635750 TRIM8Q9BZR9 551 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 DDX56Q9NY93 547 aaKnown RBP5.93□□□□□ -1.46
SCN1A-209ENST00000635750 FBXO40Q9UH90 709 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-209ENST00000635750 AATKQ6ZMQ8 1374 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 UBN2Q6ZU65 1347 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 ESRRAP11474 423 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-209ENST00000635750 BRD2P25440 801 aaKnown RBP5.93□□□□□ -1.46
SCN1A-209ENST00000635750 ELF2Q15723 593 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 TBC1D9BQ66K14 1250 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 MB21D1Q8N884 522 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 FANCBQ8NB91 859 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 GPKOWQ92917 476 aaPredicted RBP eCLIP5.93□□□□□ -1.46
SCN1A-209ENST00000635750 RAD18Q9NS91 495 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 MPP6Q9NZW5 540 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 CTTNBP2Q8WZ74 1663 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 GYG1P46976 350 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 ALS2CLQ60I27 953 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 ZNF438Q7Z4V0 828 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 PCIF1Q9H4Z3 704 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 ZWILCHQ9H900 591 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 CNOT10Q9H9A5 744 aaKnown RBP5.93□□□□□ -1.46
SCN1A-209ENST00000635750 ZNF556Q9HAH1 456 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 WARS2Q9UGM6 360 aaKnown RBP5.93□□□□□ -1.46
SCN1A-209ENST00000635750 FAM32AQ9Y421 112 aaKnown RBP5.93□□□□□ -1.46
SCN1A-209ENST00000635750 KDM5AP29375 1690 aaKnown RBP5.93□□□□□ -1.46
SCN1A-209ENST00000635750 KIF1BO60333 1816 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 PYGMP11217 842 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 CCDC157Q569K6 752 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 ADCK2Q7Z695 626 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 WDR75Q8IWA0 830 aaKnown RBP5.92□□□□□ -1.46
SCN1A-209ENST00000635750 ST13P4Q8IZP2 240 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-209ENST00000635750 DDX17Q92841 729 aaKnown RBP5.92□□□□□ -1.46
SCN1A-209ENST00000635750 CACNA2D2Q9NY47 1150 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 SBNO1A3KN83 1393 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 CLDN3O15551 220 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 RLBP1P12271 317 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 MAPK6Q16659 721 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 MFSD4BQ5TF39 518 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 HAUS6Q7Z4H7 955 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 TTC39CQ8N584 583 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 RABGGTAQ92696 567 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 FAM227BQ96M60 508 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 MMP19Q99542 508 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 NGRNQ9NPE2 291 aaKnown RBP5.92□□□□□ -1.46
SCN1A-209ENST00000635750 AIPL1Q9NZN9 384 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 SLAIN2Q9P270 581 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 PCDHA4Q9UN74 947 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 UBA6A0AVT1 1052 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-209ENST00000635750 SUPT3HO75486 399 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 DCTN3O75935 186 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 RAD17O75943 681 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 COPB2P35606 906 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 DDIT3P35638 169 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 LIG3P49916 1009 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 DMC1Q14565 340 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 NAALADL2Q58DX5 795 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 HAUS4Q9H6D7 363 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 KIAA1586Q9HCI6 787 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 KRCC1Q9NPI7 259 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-209ENST00000635750 STAP1Q9ULZ2 295 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 APOBEC2Q9Y235 224 aaKnown RBP5.92□□□□□ -1.46
SCN1A-209ENST00000635750 RAPGEF6Q8TEU7 1601 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 KRT37O76014 449 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 ADRA2BP18089 450 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 ITPRIPL1Q6GPH6 555 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 STKLD1Q8NE28 680 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 ABTB1Q969K4 478 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-209ENST00000635750 DHTKD1Q96HY7 919 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-209ENST00000635750 CCDC90BQ9GZT6 254 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 DMAP1Q9NPF5 467 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-209ENST00000635750 PSD3Q9NYI0 1048 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 RNF123Q5XPI4 1314 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 RSPH10B2B2RC85 870 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 PJA2O43164 708 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 CCDC159P0C7I6 412 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 RSPH10BP0C881 870 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 ZNF235Q14590 738 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 ZNF699Q32M78 642 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 TBC1D10BQ4KMP7 808 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-209ENST00000635750 DNAJC10Q8IXB1 793 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 ZNF513Q8N8E2 541 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-209ENST00000635750 TTC13Q8NBP0 860 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 FBXO18Q8NFZ0 1043 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 SCFD1Q8WVM8 642 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 ZNF341Q9BYN7 854 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 C2orf40Q9H1Z8 148 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 APOA1P02647 267 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 CLCN1P35523 988 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 SERPINB10P48595 397 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 GPC3P51654 580 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 MDM2Q00987 491 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-209ENST00000635750 LAMB3Q13751 1172 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 CENPPQ6IPU0 288 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 KRT78Q8N1N4 520 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 TTLL6Q8N841 843 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 EXD1Q8NHP7 514 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 PIM2Q9P1W9 311 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms