RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 MARCH8Q5T0T0 291 aa16.6■□□□□ 0.25
HSPG2-214ENST00000635682 TMEM192Q8IY95 271 aa16.6■□□□□ 0.25
HSPG2-214ENST00000635682 APBB2Q92870 758 aa16.6■□□□□ 0.25
HSPG2-214ENST00000635682 GJA10Q969M2 543 aa16.6■□□□□ 0.25
HSPG2-214ENST00000635682 CCDC43Q96MW1 224 aaKnown RBP16.6■□□□□ 0.25
HSPG2-214ENST00000635682 PCYT2Q99447 389 aa16.6■□□□□ 0.25
HSPG2-214ENST00000635682 PCDHA12Q9UN75 941 aa16.6■□□□□ 0.25
HSPG2-214ENST00000635682 COL1A2P08123 1366 aa16.6■□□□□ 0.25
HSPG2-214ENST00000635682 NLRC5Q86WI3 1866 aa16.59■□□□□ 0.25
HSPG2-214ENST00000635682 IGKV6D-21A0A0A0MT36 114 aa16.59■□□□□ 0.25
HSPG2-214ENST00000635682 KCNA5P22460 613 aa16.59■□□□□ 0.25
HSPG2-214ENST00000635682 TXKP42681 527 aa16.59■□□□□ 0.25
HSPG2-214ENST00000635682 MGAT3Q09327 533 aa16.59■□□□□ 0.25
HSPG2-214ENST00000635682 PPP2R5CQ13362 524 aa16.59■□□□□ 0.25
HSPG2-214ENST00000635682 CUL4AQ13619 759 aa16.59■□□□□ 0.25
HSPG2-214ENST00000635682 ZNF174Q15697 407 aa16.59■□□□□ 0.25
HSPG2-214ENST00000635682 KHSRPQ92945 711 aaKnown RBP eCLIP16.59■□□□□ 0.25
HSPG2-214ENST00000635682 SNX21Q969T3 373 aa16.59■□□□□ 0.25
HSPG2-214ENST00000635682 MRPL38Q96DV4 380 aaKnown RBP16.59■□□□□ 0.25
HSPG2-214ENST00000635682 INTS4Q96HW7 963 aaKnown RBP16.59■□□□□ 0.25
HSPG2-214ENST00000635682 FAM49AQ9H0Q0 323 aaPredicted RBP16.59■□□□□ 0.25
HSPG2-214ENST00000635682 KCNMB3Q9NPA1 279 aa16.59■□□□□ 0.25
HSPG2-214ENST00000635682 MAFBQ9Y5Q3 323 aaPredicted RBP16.59■□□□□ 0.25
HSPG2-214ENST00000635682 CDY2AQ9Y6F7 541 aa16.59■□□□□ 0.25
HSPG2-214ENST00000635682 H3BNC9 293 aa16.58■□□□□ 0.24
HSPG2-214ENST00000635682 ENPP3O14638 875 aa16.58■□□□□ 0.24
HSPG2-214ENST00000635682 OATP04181 439 aa16.58■□□□□ 0.24
HSPG2-214ENST00000635682 U2AF2P26368 475 aaKnown RBP eCLIP16.58■□□□□ 0.24
HSPG2-214ENST00000635682 TMOD1P28289 359 aa16.58■□□□□ 0.24
HSPG2-214ENST00000635682 PSMC5P62195 406 aa16.58■□□□□ 0.24
HSPG2-214ENST00000635682 PRKCEQ02156 737 aa16.58■□□□□ 0.24
HSPG2-214ENST00000635682 PTPROQ16827 1216 aa16.58■□□□□ 0.24
HSPG2-214ENST00000635682 RILPL1Q5EBL4 403 aa16.58■□□□□ 0.24
HSPG2-214ENST00000635682 RPAINQ86UA6 219 aa16.58■□□□□ 0.24
HSPG2-214ENST00000635682 ERMNQ8TAM6 284 aa16.58■□□□□ 0.24
HSPG2-214ENST00000635682 TRAPPC12Q8WVT3 735 aa16.58■□□□□ 0.24
HSPG2-214ENST00000635682 SAMD11Q96NU1 681 aa16.58■□□□□ 0.24
HSPG2-214ENST00000635682 RAB34Q9BZG1 259 aa16.58■□□□□ 0.24
HSPG2-214ENST00000635682 TTC12Q9H892 705 aaPredicted RBP16.58■□□□□ 0.24
HSPG2-214ENST00000635682 CD320Q9NPF0 282 aa16.58■□□□□ 0.24
HSPG2-214ENST00000635682 FOXD4L1Q9NU39 408 aa16.58■□□□□ 0.24
HSPG2-214ENST00000635682 SEPT9Q9UHD8 586 aaPredicted RBP16.58■□□□□ 0.24
HSPG2-214ENST00000635682 LOXHD1Q8IVV2 1947 aa16.57■□□□□ 0.24
HSPG2-214ENST00000635682 IGSF9BQ9UPX0 1349 aa16.57■□□□□ 0.24
HSPG2-214ENST00000635682 MBLAC1A4D2B0 266 aaPredicted RBP16.57■□□□□ 0.24
HSPG2-214ENST00000635682 EDIL3O43854 480 aa16.57■□□□□ 0.24
HSPG2-214ENST00000635682 OR52Z1P0C646 297 aa16.57■□□□□ 0.24
HSPG2-214ENST00000635682 TMEM62Q0P6H9 643 aa16.57■□□□□ 0.24
HSPG2-214ENST00000635682 XKR3Q5GH77 459 aa16.57■□□□□ 0.24
HSPG2-214ENST00000635682 FBXO47Q5MNV8 452 aa16.57■□□□□ 0.24
HSPG2-214ENST00000635682 IER5Q5VY09 327 aa16.57■□□□□ 0.24
HSPG2-214ENST00000635682 EP400NLQ6ZTU2 488 aa16.57■□□□□ 0.24
HSPG2-214ENST00000635682 FIBCD1Q8N539 461 aa16.57■□□□□ 0.24
HSPG2-214ENST00000635682 METTL13Q8N6R0 699 aa16.57■□□□□ 0.24
HSPG2-214ENST00000635682 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.57■□□□□ 0.24
HSPG2-214ENST00000635682 MAP7D2Q96T17 732 aa16.57■□□□□ 0.24
HSPG2-214ENST00000635682 C1QTNF1Q9BXJ1 281 aa16.57■□□□□ 0.24
HSPG2-214ENST00000635682 TTC3P53804 2025 aa16.57■□□□□ 0.24
HSPG2-214ENST00000635682 DDX11L8A8MPP1 907 aa16.56■□□□□ 0.24
HSPG2-214ENST00000635682 H3BQ06 376 aaPredicted RBP16.56■□□□□ 0.24
HSPG2-214ENST00000635682 MAGEB2O15479 319 aa16.56■□□□□ 0.24
HSPG2-214ENST00000635682 P4HBP07237 508 aaKnown RBP16.56■□□□□ 0.24
HSPG2-214ENST00000635682 KLRC1P26715 233 aa16.56■□□□□ 0.24
HSPG2-214ENST00000635682 CD52P31358 61 aa16.56■□□□□ 0.24
HSPG2-214ENST00000635682 CTNNB1P35222 781 aa16.56■□□□□ 0.24
HSPG2-214ENST00000635682 QARSP47897 775 aaKnown RBP16.56■□□□□ 0.24
HSPG2-214ENST00000635682 MRPS6P82932 125 aaKnown RBP16.56■□□□□ 0.24
HSPG2-214ENST00000635682 TBC1D8BQ0IIM8 1120 aa16.56■□□□□ 0.24
HSPG2-214ENST00000635682 EPHA7Q15375 998 aa16.56■□□□□ 0.24
HSPG2-214ENST00000635682 LEXMQ3ZCV2 418 aa16.56■□□□□ 0.24
HSPG2-214ENST00000635682 TCEAL5Q5H9L2 206 aa16.56■□□□□ 0.24
HSPG2-214ENST00000635682 MTHFD1LQ6UB35 978 aa16.56■□□□□ 0.24
HSPG2-214ENST00000635682 OTUD6AQ7L8S5 288 aa16.56■□□□□ 0.24
HSPG2-214ENST00000635682 BANK1Q8NDB2 785 aa16.56■□□□□ 0.24
HSPG2-214ENST00000635682 NEK9Q8TD19 979 aa16.56■□□□□ 0.24
HSPG2-214ENST00000635682 HAS1Q92839 578 aa16.56■□□□□ 0.24
HSPG2-214ENST00000635682 SCLT1Q96NL6 688 aa16.56■□□□□ 0.24
HSPG2-214ENST00000635682 JPH2Q9BR39 696 aaPredicted RBP16.56■□□□□ 0.24
HSPG2-214ENST00000635682 AGO3Q9H9G7 860 aaKnown RBP16.56■□□□□ 0.24
HSPG2-214ENST00000635682 PCDHA2Q9Y5H9 948 aa16.56■□□□□ 0.24
HSPG2-214ENST00000635682 CSPG5O95196 566 aa16.55■□□□□ 0.24
HSPG2-214ENST00000635682 IL9P15248 144 aa16.55■□□□□ 0.24
HSPG2-214ENST00000635682 DNM2P50570 870 aa16.55■□□□□ 0.24
HSPG2-214ENST00000635682 PTCRAQ6ISU1 281 aaPredicted RBP16.55■□□□□ 0.24
HSPG2-214ENST00000635682 TSHZ1Q6ZSZ6 1077 aa16.55■□□□□ 0.24
HSPG2-214ENST00000635682 BRAPQ7Z569 592 aa16.55■□□□□ 0.24
HSPG2-214ENST00000635682 RTN4RL1Q86UN2 441 aaPredicted RBP16.55■□□□□ 0.24
HSPG2-214ENST00000635682 EXOC8Q8IYI6 725 aa16.55■□□□□ 0.24
HSPG2-214ENST00000635682 NME8Q8N427 588 aa16.55■□□□□ 0.24
HSPG2-214ENST00000635682 VAV3Q9UKW4 847 aa16.55■□□□□ 0.24
HSPG2-214ENST00000635682 STK24Q9Y6E0 443 aa16.55■□□□□ 0.24
HSPG2-214ENST00000635682 SMIM35A0A1B0GVV1 85 aa16.54■□□□□ 0.24
HSPG2-214ENST00000635682 LAD1O00515 517 aa16.54■□□□□ 0.24
HSPG2-214ENST00000635682 GRM6O15303 877 aa16.54■□□□□ 0.24
HSPG2-214ENST00000635682 PDIA4P13667 645 aaKnown RBP16.54■□□□□ 0.24
HSPG2-214ENST00000635682 BMPR1AP36894 532 aa16.54■□□□□ 0.24
HSPG2-214ENST00000635682 MTERF2Q49AM1 385 aa16.54■□□□□ 0.24
HSPG2-214ENST00000635682 TIGD5Q53EQ6 642 aa16.54■□□□□ 0.24
HSPG2-214ENST00000635682 ODR4Q5SWX8 454 aa16.54■□□□□ 0.24
HSPG2-214ENST00000635682 HAUS3Q68CZ6 603 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms