RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 USP42Q9H9J4 1324 aaKnown RBP9.93□□□□□ -0.82
USB1-216ENST00000624720 PSDA5PKW4 1024 aaPredicted RBP9.93□□□□□ -0.82
USB1-216ENST00000624720 OPLAHO14841 1288 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 PRKAB2O43741 272 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 ZNF202O95125 648 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 RXRAP19793 462 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 ADD2P35612 726 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 XRCC4Q13426 336 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 ARID5BQ14865 1188 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 SLC27A3Q5K4L6 730 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 TPTE2Q6XPS3 522 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 SH3BP5LQ7L8J4 393 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 MTMR9Q96QG7 549 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 RTFDC1Q9BY42 306 aaPredicted RBP9.93□□□□□ -0.82
USB1-216ENST00000624720 CARD9Q9H257 536 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 HMG20BQ9P0W2 317 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 RASAL2Q9UJF2 1139 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 NOX1Q9Y5S8 564 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 CYP46A1Q9Y6A2 500 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 GRIN2DO15399 1336 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 BRWD3Q6RI45 1802 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 A0A1W2PRQ8 180 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 CDK2AP1O14519 115 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 GLI1P08151 1106 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 GSTT1P30711 240 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 PUM3Q15397 648 aaKnown RBP9.93□□□□□ -0.82
USB1-216ENST00000624720 ATL3Q6DD88 541 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 HS6ST3Q8IZP7 471 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 RBM14Q96PK6 669 aaKnown RBP9.93□□□□□ -0.82
USB1-216ENST00000624720 ARMT1Q9H993 441 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 SUGCTQ9HAC7 445 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 ABCB6Q9NP58 842 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 GGA2Q9UJY4 613 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 SLC4A4Q9Y6R1 1079 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 ZNF536O15090 1300 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 ZNF532Q9HCE3 1301 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 VPS37CA5D8V6 355 aaPredicted RBP9.93□□□□□ -0.82
USB1-216ENST00000624720 TTLL13PA6NNM8 815 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 PSMD14O00487 310 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 RNF113AO15541 343 aaKnown RBP9.93□□□□□ -0.82
USB1-216ENST00000624720 CIAO1O76071 339 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 SYF2O95926 243 aaKnown RBP9.93□□□□□ -0.82
USB1-216ENST00000624720 SLC5A1P13866 664 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 PSMA3P25788 255 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 HAAOP46952 286 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 EN1Q05925 392 aaPredicted RBP9.93□□□□□ -0.82
USB1-216ENST00000624720 STIM1Q13586 685 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 GNA13Q14344 377 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 NECTIN1Q15223 517 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 ZNF827Q17R98 1081 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 CEP78Q5JTW2 689 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 BLOC1S2Q6QNY1 142 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 USP48Q86UV5 1035 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 SPARTQ8N0X7 666 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 MAML1Q92585 1016 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 MAP4K1Q92918 833 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 ALPK1Q96QP1 1244 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 XAB2Q9HCS7 855 aaKnown RBP9.93□□□□□ -0.82
USB1-216ENST00000624720 POLG2Q9UHN1 485 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 MOSPD1Q9UJG1 213 aa9.93□□□□□ -0.82
USB1-216ENST00000624720 RIC1Q4ADV7 1423 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 AK9Q5TCS8 1911 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 A0A0J9YVX5 310 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 HAT1O14929 419 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 GPAA1O43292 621 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 HSPD1P10809 573 aaKnown RBP9.92□□□□□ -0.82
USB1-216ENST00000624720 MAPRE1Q15691 268 aaKnown RBP9.92□□□□□ -0.82
USB1-216ENST00000624720 CCDC14Q49A88 953 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 IGSF11Q5DX21 431 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 DEPDC1Q5TB30 811 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 RNF220Q5VTB9 566 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 E4F1Q66K89 784 aaPredicted RBP9.92□□□□□ -0.82
USB1-216ENST00000624720 STOX1Q6ZVD7 989 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 MAP7D3Q8IWC1 876 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 ARHGEF2Q92974 986 aaKnown RBP9.92□□□□□ -0.82
USB1-216ENST00000624720 BRF1Q92994 677 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 SDCCAG3Q96C92 435 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 ANKRD27Q96NW4 1050 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 CATSPER2Q96P56 530 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 SYT15Q9BQS2 421 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 FAM129AQ9BZQ8 928 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 FTOQ9C0B1 505 aaKnown RBP eCLIP9.92□□□□□ -0.82
USB1-216ENST00000624720 SERHL2Q9H4I8 314 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 DNAJC18Q9H819 358 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 NCOA5Q9HCD5 579 aaKnown RBP9.92□□□□□ -0.82
USB1-216ENST00000624720 UBN1Q9NPG3 1134 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 HMGXB4Q9UGU5 601 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 FAM184BQ9ULE4 1060 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 PARP3Q9Y6F1 533 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 ARHGAP33O14559 1287 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 RIMBP2O15034 1052 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 TSPAN9O75954 239 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 CYP2C9P11712 490 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 TUBP50607 506 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 KRT83P78385 493 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 C1orf228Q6PIY5 440 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 CCDC81Q6ZN84 652 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 DEFB132Q7Z7B7 95 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 AADATQ8N5Z0 425 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 VGLL2Q8N8G2 317 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms