RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 RPS6KA4O75676 772 aa14.16□□□□□ -0.14
CHD1L-210ENST00000622533 FAM228BP0C875 321 aa14.16□□□□□ -0.14
CHD1L-210ENST00000622533 RPS6KA1Q15418 735 aa14.16□□□□□ -0.14
CHD1L-210ENST00000622533 TMC3Q7Z5M5 1100 aa14.16□□□□□ -0.14
CHD1L-210ENST00000622533 ERICH1Q86X53 443 aa14.16□□□□□ -0.14
CHD1L-210ENST00000622533 KCNV2Q8TDN2 545 aa14.16□□□□□ -0.14
CHD1L-210ENST00000622533 UBA5Q9GZZ9 404 aa14.16□□□□□ -0.14
CHD1L-210ENST00000622533 KANSL2Q9H9L4 492 aa14.16□□□□□ -0.14
CHD1L-210ENST00000622533 ADAMTS1Q9UHI8 967 aa14.16□□□□□ -0.14
CHD1L-210ENST00000622533 STK38LQ9Y2H1 464 aa14.16□□□□□ -0.14
CHD1L-210ENST00000622533 ATAD5Q96QE3 1844 aa14.16□□□□□ -0.14
CHD1L-210ENST00000622533 SHBGP04278 402 aa14.15□□□□□ -0.14
CHD1L-210ENST00000622533 IFNAR2P48551 515 aa14.15□□□□□ -0.14
CHD1L-210ENST00000622533 FAM163AQ96GL9 167 aaPredicted RBP14.15□□□□□ -0.14
CHD1L-210ENST00000622533 ARHGEF10LQ9HCE6 1279 aa14.15□□□□□ -0.14
CHD1L-210ENST00000622533 ETAA1Q9NY74 926 aa14.15□□□□□ -0.14
CHD1L-210ENST00000622533 CD2APQ9Y5K6 639 aa14.15□□□□□ -0.14
CHD1L-210ENST00000622533 F8VZ95 297 aa14.15□□□□□ -0.14
CHD1L-210ENST00000622533 CETN3O15182 167 aa14.15□□□□□ -0.14
CHD1L-210ENST00000622533 TTI1O43156 1089 aa14.15□□□□□ -0.14
CHD1L-210ENST00000622533 UBOX5O94941 541 aa14.15□□□□□ -0.14
CHD1L-210ENST00000622533 VIMP08670 466 aaKnown RBP14.15□□□□□ -0.14
CHD1L-210ENST00000622533 TNNI2P48788 182 aa14.15□□□□□ -0.14
CHD1L-210ENST00000622533 FAM182BQ5T319 152 aa14.15□□□□□ -0.14
CHD1L-210ENST00000622533 TRPM8Q7Z2W7 1104 aa14.15□□□□□ -0.14
CHD1L-210ENST00000622533 KCNK18Q7Z418 384 aa14.15□□□□□ -0.14
CHD1L-210ENST00000622533 SLC5A4Q9NY91 659 aa14.15□□□□□ -0.14
CHD1L-210ENST00000622533 PCDHA12Q9UN75 941 aa14.15□□□□□ -0.14
CHD1L-210ENST00000622533 SBF2Q86WG5 1849 aa14.15□□□□□ -0.14
CHD1L-210ENST00000622533 AHDC1Q5TGY3 1603 aaPredicted RBP14.15□□□□□ -0.14
CHD1L-210ENST00000622533 HGSO14964 777 aaPredicted RBP14.14□□□□□ -0.15
CHD1L-210ENST00000622533 KIF4AO95239 1232 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 SNHG28P0DPA3 235 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 RIPK1Q13546 671 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 CCDC26Q8TAB7 109 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 ACTRT1Q8TDG2 376 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 COA7Q96BR5 231 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 PRMT1Q99873 361 aaKnown RBP14.14□□□□□ -0.15
CHD1L-210ENST00000622533 NUDT12Q9BQG2 462 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 SPATA31A5Q5VU36 1347 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 SPATA31A7Q8IWB4 1347 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 PITPNM2Q9BZ72 1349 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 IGF2BP3O00425 579 aaKnown RBP eCLIP14.14□□□□□ -0.15
CHD1L-210ENST00000622533 LINGO3P0C6S8 592 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 NQO1P15559 274 aaKnown RBP14.14□□□□□ -0.15
CHD1L-210ENST00000622533 ABL2P42684 1182 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 CLK2P49760 499 aaKnown RBP14.14□□□□□ -0.15
CHD1L-210ENST00000622533 ICA1Q05084 483 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 SCFD2Q8WU76 684 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 GANQ9H2C0 597 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 MTMR4Q9NYA4 1195 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 NHSQ6T4R5 1651 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 C10orf71Q711Q0 1435 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 FAM170AA1A519 330 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 KRIT1O00522 736 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 USP11P51784 963 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 MTMR3Q13615 1198 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 ZNF268Q14587 947 aaPredicted RBP14.14□□□□□ -0.15
CHD1L-210ENST00000622533 NBPF20Q3BBV1 942 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 PIGWQ7Z7B1 504 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 UHMK1Q8TAS1 419 aaKnown RBP14.14□□□□□ -0.15
CHD1L-210ENST00000622533 GOPCQ9HD26 462 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 KCNMB3Q9NPA1 279 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 NOC2LQ9Y3T9 749 aaKnown RBP14.14□□□□□ -0.15
CHD1L-210ENST00000622533 PCDHA2Q9Y5H9 948 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 CDK5RAP2Q96SN8 1893 aa14.14□□□□□ -0.15
CHD1L-210ENST00000622533 CCDC188H7C350 402 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 EDIL3O43854 480 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 NCALDP61601 193 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 ADAM9Q13443 819 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 HERC4Q5GLZ8 1057 aaPredicted RBP14.13□□□□□ -0.15
CHD1L-210ENST00000622533 FRMD5Q7Z6J6 570 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 VPS36Q86VN1 386 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 FAM133AQ8N9E0 248 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 GLIS3Q8NEA6 775 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 HAS1Q92839 578 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 TLCD1Q96CP7 247 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 TRIM51Q9BSJ1 452 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 KCTD10Q9H3F6 313 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 ECT2Q9H8V3 914 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 EMILIN3Q9NT22 766 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 SAMD15Q9P1V8 674 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 TRIM33Q9UPN9 1127 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 FRMPD2Q68DX3 1309 aaPredicted RBP14.13□□□□□ -0.15
CHD1L-210ENST00000622533 KCNQ2O43526 872 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 EVI5O60447 810 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 SNUPNO95149 360 aaKnown RBP14.13□□□□□ -0.15
CHD1L-210ENST00000622533 GSTA1P08263 222 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 KRT16P08779 473 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 PLA2G4BP0C869 781 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 RARAP10276 462 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 IFI35P80217 286 aaPredicted RBP14.13□□□□□ -0.15
CHD1L-210ENST00000622533 GRIK5Q16478 980 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 TRIM68Q6AZZ1 485 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 ATXN2LQ8WWM7 1075 aaKnown RBP14.13□□□□□ -0.15
CHD1L-210ENST00000622533 CNOT10Q9H9A5 744 aaKnown RBP14.13□□□□□ -0.15
CHD1L-210ENST00000622533 CPSF2Q9P2I0 782 aaKnown RBP14.13□□□□□ -0.15
CHD1L-210ENST00000622533 CORO1CQ9ULV4 474 aaPredicted RBP14.13□□□□□ -0.15
CHD1L-210ENST00000622533 STK24Q9Y6E0 443 aa14.13□□□□□ -0.15
CHD1L-210ENST00000622533 ANKRD33BA6NCL7 494 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms