RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 HOXA13P31271 388 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA11-203ENST00000622044 DRAP1Q14919 205 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA11-203ENST00000622044 CCDC6Q16204 474 aa12.34□□□□□ -0.43
PCDHGA11-203ENST00000622044 CYP4F22Q6NT55 531 aa12.34□□□□□ -0.43
PCDHGA11-203ENST00000622044 ARMC9Q7Z3E5 817 aa12.34□□□□□ -0.43
PCDHGA11-203ENST00000622044 TAB3Q8N5C8 712 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA11-203ENST00000622044 TMX4Q9H1E5 349 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA11-203ENST00000622044 CCT8L1PA6NM43 557 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 TCP11X1B4DZS4 312 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 ATMINO43313 823 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 FERP16591 822 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 HNRNPH3P31942 346 aaKnown RBP12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 GRIK5Q16478 980 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 LRIG3Q6UXM1 1119 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 TMC3Q7Z5M5 1100 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 FMNL3Q8IVF7 1028 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 SCFD1Q8WVM8 642 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 C18orf8Q96DM3 657 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 IFT74Q96LB3 600 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 SPZ1Q9BXG8 430 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 EDEM3Q9BZQ6 932 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 F8VZ95 297 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 RFC4P35249 363 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 CTTNQ14247 550 aaKnown RBP12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 ECM1Q16610 540 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 SPRED3Q2MJR0 410 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 HP1BP3Q5SSJ5 553 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 ZNF449Q6P9G9 518 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 SLC51AQ86UW1 340 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 YIPF3Q9GZM5 350 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 IKZF4Q9H2S9 585 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 C4AP0C0L4 1744 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 C4BP0C0L5 1744 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 NID2Q14112 1375 aa12.33□□□□□ -0.44
PCDHGA11-203ENST00000622044 ENO4A6NNW6 628 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 THAP12O43422 761 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 SUN1O94901 812 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 CASP5P51878 434 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 UAP1Q16222 522 aaPredicted RBP12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 KNOP1Q1ED39 458 aaKnown RBP12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 SLC35G1Q2M3R5 365 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 SBK1Q52WX2 424 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 INTS5Q6P9B9 1019 aaKnown RBP12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 PPM1KQ8N3J5 372 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 PIK3R5Q8WYR1 880 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 NYXQ9GZU5 481 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 ECT2Q9H8V3 914 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 PCDHGC5Q9Y5F6 944 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 CFBP00751 764 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 AKR1B1P15121 316 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 EIF3BP55884 814 aaKnown RBP12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 FBXO33Q7Z6M2 555 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 TRIM59Q8IWR1 403 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 ADGRF4Q8IZF3 695 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 SEMA4AQ9H3S1 761 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 SLITRK6Q9H5Y7 841 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 RGL1Q9NZL6 768 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 KLHL14Q9P2G3 628 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 SPEF2Q9C093 1822 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 NOL4O94818 638 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 HLA-DOAP06340 250 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 NMT1P30419 496 aaKnown RBP12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 SETDB1Q15047 1291 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 ACCSLQ4AC99 568 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 JAMLQ86YT9 394 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 SPICE1Q8N0Z3 855 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 PRCCQ92733 491 aaPredicted RBP12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 CCDC127Q96BQ5 260 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 HOOK2Q96ED9 719 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 REEP2Q9BRK0 252 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 USP21Q9UK80 565 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 USTQ9Y2C2 406 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 RABGAP1Q9Y3P9 1069 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 NR2E1Q9Y466 385 aa12.32□□□□□ -0.44
PCDHGA11-203ENST00000622044 BAZ2AQ9UIF9 1905 aaKnown RBP12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 SLURP2P0DP57 97 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 KRT5P13647 590 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 TAL1P17542 331 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 PON1P27169 355 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 FNTAP49354 379 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 ZC2HC1CQ53FD0 456 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 TRPM8Q7Z2W7 1104 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 SLF2Q8IX21 1173 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 FAM178BQ8IXR5 827 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 SRRM1Q8IYB3 904 aaKnown RBP12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 DAGLBQ8NCG7 672 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 ARHGEF2Q92974 986 aaKnown RBP12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 FAM118BQ9BPY3 351 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 UBE2TQ9NPD8 197 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 PPP1R9AQ9ULJ8 1098 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 AKAP3O75969 853 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 LMNB1P20700 586 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 ERFP50548 548 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 CACNB3P54284 484 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 PLCB3Q01970 1234 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 KCNA1Q09470 495 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 DRP2Q13474 957 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 NFIXQ14938 502 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 TNIP1Q15025 636 aa12.31□□□□□ -0.44
PCDHGA11-203ENST00000622044 KIAA1755Q5JYT7 1200 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms