RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 RBM19Q9Y4C8 960 aaKnown RBP15.99■□□□□ 0.15
CBWD3-217ENST00000621474 RSPH10B2B2RC85 870 aa15.98■□□□□ 0.15
CBWD3-217ENST00000621474 YEATS4O95619 227 aa15.98■□□□□ 0.15
CBWD3-217ENST00000621474 CXCL10P02778 98 aa15.98■□□□□ 0.15
CBWD3-217ENST00000621474 RSPH10BP0C881 870 aa15.98■□□□□ 0.15
CBWD3-217ENST00000621474 XRCC6P12956 609 aaKnown RBP eCLIP15.98■□□□□ 0.15
CBWD3-217ENST00000621474 GRB10Q13322 594 aa15.98■□□□□ 0.15
CBWD3-217ENST00000621474 TCTN1Q2MV58 587 aa15.98■□□□□ 0.15
CBWD3-217ENST00000621474 XKR9Q5GH70 373 aa15.98■□□□□ 0.15
CBWD3-217ENST00000621474 SPECC1Q5M775 1068 aa15.98■□□□□ 0.15
CBWD3-217ENST00000621474 C9orf50Q5SZB4 431 aa15.98■□□□□ 0.15
CBWD3-217ENST00000621474 KRT79Q5XKE5 535 aa15.98■□□□□ 0.15
CBWD3-217ENST00000621474 OTUD6AQ7L8S5 288 aa15.98■□□□□ 0.15
CBWD3-217ENST00000621474 METTL13Q8N6R0 699 aa15.98■□□□□ 0.15
CBWD3-217ENST00000621474 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.98■□□□□ 0.15
CBWD3-217ENST00000621474 IL23AQ9NPF7 189 aa15.98■□□□□ 0.15
CBWD3-217ENST00000621474 DDX19AQ9NUU7 478 aaKnown RBP15.98■□□□□ 0.15
CBWD3-217ENST00000621474 DBR1Q9UK59 544 aaKnown RBP15.98■□□□□ 0.15
CBWD3-217ENST00000621474 MICAL3Q7RTP6 2002 aa15.98■□□□□ 0.15
CBWD3-217ENST00000621474 SPTLC2O15270 562 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 PPP6R2O75170 966 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 VTNP04004 478 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 MRPS6P82932 125 aaKnown RBP15.97■□□□□ 0.15
CBWD3-217ENST00000621474 PPIGQ13427 754 aaKnown RBP eCLIP15.97■□□□□ 0.15
CBWD3-217ENST00000621474 TMEM240Q5SV17 173 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 ATL3Q6DD88 541 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 DEFB128Q7Z7B8 93 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 TMEM40Q8WWA1 233 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 EPSTI1Q96J88 318 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 NACC1Q96RE7 527 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 UBE2OQ9C0C9 1292 aaKnown RBP15.97■□□□□ 0.15
CBWD3-217ENST00000621474 SUGCTQ9HAC7 445 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 CDHR5Q9HBB8 845 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 BMP2KQ9NSY1 1161 aaPredicted RBP15.97■□□□□ 0.15
CBWD3-217ENST00000621474 PPME1Q9Y570 386 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 STK24Q9Y6E0 443 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 CDY2AQ9Y6F7 541 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 KDM3AQ9Y4C1 1321 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 E9PMD0 336 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 GPR32O75388 356 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 RFC2P35250 354 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 STK38Q15208 465 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 TMEM119Q4V9L6 283 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 NME8Q8N427 588 aa15.97■□□□□ 0.15
CBWD3-217ENST00000621474 KRI1Q8N9T8 703 aaKnown RBP15.97■□□□□ 0.15
CBWD3-217ENST00000621474 RPLP2P05387 115 aaKnown RBP15.96■□□□□ 0.15
CBWD3-217ENST00000621474 RFC5P40937 340 aa15.96■□□□□ 0.15
CBWD3-217ENST00000621474 POLGP54098 1239 aaPredicted RBP15.96■□□□□ 0.15
CBWD3-217ENST00000621474 EMC2Q15006 297 aa15.96■□□□□ 0.15
CBWD3-217ENST00000621474 SHHQ15465 462 aa15.96■□□□□ 0.15
CBWD3-217ENST00000621474 AXDND1Q5T1B0 1012 aaPredicted RBP15.96■□□□□ 0.15
CBWD3-217ENST00000621474 ZNF365Q70YC5 407 aa15.96■□□□□ 0.15
CBWD3-217ENST00000621474 RSPH3Q86UC2 560 aa15.96■□□□□ 0.15
CBWD3-217ENST00000621474 CABP7Q86V35 215 aa15.96■□□□□ 0.15
CBWD3-217ENST00000621474 SLC7A3Q8WY07 619 aa15.96■□□□□ 0.15
CBWD3-217ENST00000621474 PPP1R16BQ96T49 567 aa15.96■□□□□ 0.15
CBWD3-217ENST00000621474 PLIN2Q99541 437 aa15.96■□□□□ 0.15
CBWD3-217ENST00000621474 CCSER1Q9C0I3 900 aa15.96■□□□□ 0.15
CBWD3-217ENST00000621474 BHMT2Q9H2M3 363 aa15.96■□□□□ 0.15
CBWD3-217ENST00000621474 DGAT1O75907 488 aa15.95■□□□□ 0.14
CBWD3-217ENST00000621474 PARNO95453 639 aaKnown RBP15.95■□□□□ 0.14
CBWD3-217ENST00000621474 GPC3P51654 580 aa15.95■□□□□ 0.14
CBWD3-217ENST00000621474 NUCB2P80303 420 aa15.95■□□□□ 0.14
CBWD3-217ENST00000621474 LPIN1Q14693 890 aa15.95■□□□□ 0.14
CBWD3-217ENST00000621474 KARSQ15046 597 aaKnown RBP15.95■□□□□ 0.14
CBWD3-217ENST00000621474 KIZQ2M2Z5 673 aa15.95■□□□□ 0.14
CBWD3-217ENST00000621474 PLEKHG4Q58EX7 1191 aa15.95■□□□□ 0.14
CBWD3-217ENST00000621474 FBXO47Q5MNV8 452 aa15.95■□□□□ 0.14
CBWD3-217ENST00000621474 IER5Q5VY09 327 aa15.95■□□□□ 0.14
CBWD3-217ENST00000621474 SYMPKQ92797 1274 aaKnown RBP15.95■□□□□ 0.14
CBWD3-217ENST00000621474 TMEM143Q96AN5 459 aa15.95■□□□□ 0.14
CBWD3-217ENST00000621474 CELF4Q9BZC1 486 aaKnown RBP15.95■□□□□ 0.14
CBWD3-217ENST00000621474 ADAMTS10Q9H324 1103 aa15.95■□□□□ 0.14
CBWD3-217ENST00000621474 AGO3Q9H9G7 860 aaKnown RBP15.95■□□□□ 0.14
CBWD3-217ENST00000621474 RCOR1Q9UKL0 485 aa15.95■□□□□ 0.14
CBWD3-217ENST00000621474 CFAP45Q9UL16 551 aa15.95■□□□□ 0.14
CBWD3-217ENST00000621474 TRPV2Q9Y5S1 764 aa15.95■□□□□ 0.14
CBWD3-217ENST00000621474 USO1O60763 962 aaKnown RBP15.94■□□□□ 0.14
CBWD3-217ENST00000621474 PFKMP08237 780 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 GHRP10912 638 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 TMOD1P28289 359 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 UBA7P41226 1012 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 ZRSR1Q15695 479 aaKnown RBP15.94■□□□□ 0.14
CBWD3-217ENST00000621474 RASIP1Q5U651 963 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 KSR1Q8IVT5 923 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 TDHQ8IZJ6 230 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 ZNF668Q96K58 619 aaPredicted RBP15.94■□□□□ 0.14
CBWD3-217ENST00000621474 OSMRQ99650 979 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 MTRQ99707 1265 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 NT5C3AQ9H0P0 336 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 BLOC1S4Q9NUP1 217 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 CXXC1Q9P0U4 656 aaPredicted RBP15.94■□□□□ 0.14
CBWD3-217ENST00000621474 PCDHA7Q9UN72 937 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 AKT3Q9Y243 479 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 MYH11P35749 1972 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 GBF1Q92538 1859 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 A0A087X0B3 334 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 EYA4O95677 639 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 PLCG1P19174 1290 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 NLRP11P59045 1033 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms