RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 KCNB1Q14721 858 aa23.89■■□□□ 1.42
SGMS1-210ENST00000619438 KARSQ15046 597 aaKnown RBP23.89■■□□□ 1.42
SGMS1-210ENST00000619438 PTGISQ16647 500 aa23.89■■□□□ 1.42
SGMS1-210ENST00000619438 MFSD5Q6N075 450 aa23.89■■□□□ 1.42
SGMS1-210ENST00000619438 TMEM199Q8N511 208 aa23.89■■□□□ 1.42
SGMS1-210ENST00000619438 SAMSN1Q9NSI8 373 aaKnown RBP23.89■■□□□ 1.42
SGMS1-210ENST00000619438 KBTBD4Q9NVX7 518 aa23.89■■□□□ 1.42
SGMS1-210ENST00000619438 HDAC6Q9UBN7 1215 aa23.89■■□□□ 1.42
SGMS1-210ENST00000619438 PAXBP1Q9Y5B6 917 aa23.89■■□□□ 1.42
SGMS1-210ENST00000619438 CCNT1O60563 726 aaKnown RBP23.89■■□□□ 1.41
SGMS1-210ENST00000619438 RPN1P04843 607 aaKnown RBP23.89■■□□□ 1.41
SGMS1-210ENST00000619438 NR1I3Q14994 352 aa23.89■■□□□ 1.41
SGMS1-210ENST00000619438 LETM2Q2VYF4 491 aa23.89■■□□□ 1.41
SGMS1-210ENST00000619438 NIPA1Q7RTP0 329 aa23.89■■□□□ 1.41
SGMS1-210ENST00000619438 APTXQ7Z2E3 356 aaKnown RBP23.89■■□□□ 1.41
SGMS1-210ENST00000619438 TBCKQ8TEA7 893 aa23.89■■□□□ 1.41
SGMS1-210ENST00000619438 C16orf45Q96MC5 204 aaPredicted RBP23.89■■□□□ 1.41
SGMS1-210ENST00000619438 AGO4Q9HCK5 861 aaKnown RBP23.89■■□□□ 1.41
SGMS1-210ENST00000619438 JPH1Q9HDC5 661 aaPredicted RBP23.89■■□□□ 1.41
SGMS1-210ENST00000619438 RWDD2AQ9UIY3 292 aa23.89■■□□□ 1.41
SGMS1-210ENST00000619438 KIF2AO00139 706 aaPredicted RBP23.88■■□□□ 1.41
SGMS1-210ENST00000619438 TCF7P36402 384 aaPredicted RBP23.88■■□□□ 1.41
SGMS1-210ENST00000619438 SPECC1LQ69YQ0 1117 aa23.88■■□□□ 1.41
SGMS1-210ENST00000619438 CRYGNQ8WXF5 182 aa23.88■■□□□ 1.41
SGMS1-210ENST00000619438 CTAGE1Q96RT6 745 aa23.88■■□□□ 1.41
SGMS1-210ENST00000619438 SLC9A2Q9UBY0 812 aa23.88■■□□□ 1.41
SGMS1-210ENST00000619438 ZNF215Q9UL58 517 aaPredicted RBP23.88■■□□□ 1.41
SGMS1-210ENST00000619438 TELO2Q9Y4R8 837 aa23.88■■□□□ 1.41
SGMS1-210ENST00000619438 HAS3O00219 553 aa23.87■■□□□ 1.41
SGMS1-210ENST00000619438 USP11P51784 963 aa23.87■■□□□ 1.41
SGMS1-210ENST00000619438 CCL23P55773 120 aa23.87■■□□□ 1.41
SGMS1-210ENST00000619438 PRR16Q569H4 304 aa23.87■■□□□ 1.41
SGMS1-210ENST00000619438 GDF6Q6KF10 455 aaPredicted RBP23.87■■□□□ 1.41
SGMS1-210ENST00000619438 SESTD1Q86VW0 696 aa23.87■■□□□ 1.41
SGMS1-210ENST00000619438 BLZF1Q9H2G9 400 aa23.87■■□□□ 1.41
SGMS1-210ENST00000619438 GTF2IRD1Q9UHL9 959 aa23.87■■□□□ 1.41
SGMS1-210ENST00000619438 TUBB4AP04350 444 aa23.86■■□□□ 1.41
SGMS1-210ENST00000619438 IGSF22Q8N9C0 903 aa23.86■■□□□ 1.41
SGMS1-210ENST00000619438 STAMQ92783 540 aa23.86■■□□□ 1.41
SGMS1-210ENST00000619438 GLG1Q92896 1179 aa23.86■■□□□ 1.41
SGMS1-210ENST00000619438 MTMR9Q96QG7 549 aa23.86■■□□□ 1.41
SGMS1-210ENST00000619438 UIMC1Q96RL1 719 aa23.86■■□□□ 1.41
SGMS1-210ENST00000619438 ZNF577Q9BSK1 485 aa23.86■■□□□ 1.41
SGMS1-210ENST00000619438 NOC4LQ9BVI4 516 aaKnown RBP23.86■■□□□ 1.41
SGMS1-210ENST00000619438 GTPBP4Q9BZE4 634 aaKnown RBP23.86■■□□□ 1.41
SGMS1-210ENST00000619438 SCN10AQ9Y5Y9 1956 aa23.86■■□□□ 1.41
SGMS1-210ENST00000619438 NFASCO94856 1347 aa23.86■■□□□ 1.41
SGMS1-210ENST00000619438 USP27XA6NNY8 438 aa23.86■■□□□ 1.41
SGMS1-210ENST00000619438 CCP110O43303 1012 aa23.86■■□□□ 1.41
SGMS1-210ENST00000619438 SLC34A2O95436 690 aa23.86■■□□□ 1.41
SGMS1-210ENST00000619438 CSF2RAP15509 400 aa23.86■■□□□ 1.41
SGMS1-210ENST00000619438 CDC25AP30304 524 aa23.86■■□□□ 1.41
SGMS1-210ENST00000619438 SETQ01105 290 aaPredicted RBP23.86■■□□□ 1.41
SGMS1-210ENST00000619438 PTPN14Q15678 1187 aa23.86■■□□□ 1.41
SGMS1-210ENST00000619438 E4F1Q66K89 784 aaPredicted RBP23.86■■□□□ 1.41
SGMS1-210ENST00000619438 CABP7Q86V35 215 aa23.86■■□□□ 1.41
SGMS1-210ENST00000619438 RETREG2Q8NC44 543 aa23.86■■□□□ 1.41
SGMS1-210ENST00000619438 IGLV3-22A0A075B6J6 115 aa23.85■■□□□ 1.41
SGMS1-210ENST00000619438 GSTTP1A0A1W2PQM5 241 aa23.85■■□□□ 1.41
SGMS1-210ENST00000619438 DDX39AO00148 427 aaKnown RBP23.85■■□□□ 1.41
SGMS1-210ENST00000619438 IPO5O00410 1097 aaKnown RBP23.85■■□□□ 1.41
SGMS1-210ENST00000619438 PPIGQ13427 754 aaKnown RBP eCLIP23.85■■□□□ 1.41
SGMS1-210ENST00000619438 TRIM50Q86XT4 487 aa23.85■■□□□ 1.41
SGMS1-210ENST00000619438 DOCK5Q9H7D0 1870 aa23.85■■□□□ 1.41
SGMS1-210ENST00000619438 UMODL1Q5DID0 1318 aa23.84■■□□□ 1.41
SGMS1-210ENST00000619438 LRRC10BA6NIK2 292 aa23.84■■□□□ 1.41
SGMS1-210ENST00000619438 PP2D1A8MPX8 630 aa23.84■■□□□ 1.41
SGMS1-210ENST00000619438 CIITAP33076 1130 aa23.84■■□□□ 1.41
SGMS1-210ENST00000619438 FXR2P51116 673 aaKnown RBP eCLIP23.84■■□□□ 1.41
SGMS1-210ENST00000619438 PAK1Q13153 545 aa23.84■■□□□ 1.41
SGMS1-210ENST00000619438 ITGB3BPQ13352 177 aaPredicted RBP23.84■■□□□ 1.41
SGMS1-210ENST00000619438 BFSP2Q13515 415 aa23.84■■□□□ 1.41
SGMS1-210ENST00000619438 SHHQ15465 462 aa23.84■■□□□ 1.41
SGMS1-210ENST00000619438 CEP135Q66GS9 1140 aa23.84■■□□□ 1.41
SGMS1-210ENST00000619438 KLHL10Q6JEL2 608 aa23.84■■□□□ 1.41
SGMS1-210ENST00000619438 AZI2Q9H6S1 392 aa23.84■■□□□ 1.41
SGMS1-210ENST00000619438 TCEAL9Q9UHQ7 104 aa23.84■■□□□ 1.41
SGMS1-210ENST00000619438 SOX1O00570 391 aaPredicted RBP23.83■■□□□ 1.41
SGMS1-210ENST00000619438 RHOBTB3O94955 611 aa23.83■■□□□ 1.41
SGMS1-210ENST00000619438 SPAG1Q07617 926 aa23.83■■□□□ 1.41
SGMS1-210ENST00000619438 PPP4R3AQ6IN85 833 aa23.83■■□□□ 1.41
SGMS1-210ENST00000619438 SMYD4Q8IYR2 804 aaPredicted RBP23.83■■□□□ 1.41
SGMS1-210ENST00000619438 CCDC155Q8N6L0 562 aa23.83■■□□□ 1.41
SGMS1-210ENST00000619438 SMARCAD1Q9H4L7 1026 aa23.83■■□□□ 1.41
SGMS1-210ENST00000619438 TBC1D22BQ9NU19 505 aa23.83■■□□□ 1.41
SGMS1-210ENST00000619438 C17orf102A2RUQ5 167 aa23.83■■□□□ 1.4
SGMS1-210ENST00000619438 RIOK3O14730 519 aaKnown RBP23.83■■□□□ 1.4
SGMS1-210ENST00000619438 KLRC4O43908 158 aa23.83■■□□□ 1.4
SGMS1-210ENST00000619438 SMIM10L2AP0DMW4 78 aa23.83■■□□□ 1.4
SGMS1-210ENST00000619438 SMIM10L2BP0DMW5 78 aa23.83■■□□□ 1.4
SGMS1-210ENST00000619438 PBX1P40424 430 aa23.83■■□□□ 1.4
SGMS1-210ENST00000619438 ACTR2P61160 394 aa23.83■■□□□ 1.4
SGMS1-210ENST00000619438 RASSF8Q8NHQ8 419 aa23.83■■□□□ 1.4
SGMS1-210ENST00000619438 RNPEPQ9H4A4 650 aa23.83■■□□□ 1.4
SGMS1-210ENST00000619438 ERAP1Q9NZ08 941 aa23.83■■□□□ 1.4
SGMS1-210ENST00000619438 LIMA1Q9UHB6 759 aaKnown RBP23.83■■□□□ 1.4
SGMS1-210ENST00000619438 CTNND2Q9UQB3 1225 aa23.83■■□□□ 1.4
SGMS1-210ENST00000619438 EDIL3O43854 480 aa23.82■■□□□ 1.4
SGMS1-210ENST00000619438 GNAT1P11488 350 aa23.82■■□□□ 1.4
SGMS1-210ENST00000619438 EPHB4P54760 987 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms