RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 SERPINI1Q99574 410 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 PIH1D3Q9NQM4 214 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 NEO1Q92859 1461 aa3.28□□□□□ -1.89
LPP-221ENST00000618621 CCDC189A1A4V9 331 aa3.28□□□□□ -1.89
LPP-221ENST00000618621 ZBTB5O15062 677 aa3.28□□□□□ -1.89
LPP-221ENST00000618621 LSM1O15116 133 aaKnown RBP3.28□□□□□ -1.89
LPP-221ENST00000618621 SPAG7O75391 227 aa3.28□□□□□ -1.89
LPP-221ENST00000618621 ST3GAL1Q11201 340 aa3.28□□□□□ -1.89
LPP-221ENST00000618621 SYDE2Q5VT97 1194 aa3.28□□□□□ -1.89
LPP-221ENST00000618621 FAM160B1Q5W0V3 765 aa3.28□□□□□ -1.89
LPP-221ENST00000618621 PI16Q6UXB8 463 aa3.28□□□□□ -1.89
LPP-221ENST00000618621 GDAP1Q8TB36 358 aa3.28□□□□□ -1.89
LPP-221ENST00000618621 LRRC1Q9BTT6 524 aa3.28□□□□□ -1.89
LPP-221ENST00000618621 ZFP69BQ9UJL9 534 aa3.28□□□□□ -1.89
LPP-221ENST00000618621 ZNF804BA4D1E1 1349 aa3.28□□□□□ -1.89
LPP-221ENST00000618621 ITIH6Q6UXX5 1313 aa3.28□□□□□ -1.89
LPP-221ENST00000618621 KDM5CP41229 1560 aa3.28□□□□□ -1.89
LPP-221ENST00000618621 TCP11X1B4DZS4 312 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 ACSL3O95573 720 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 SERPINB2P05120 415 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 ACTN1P12814 892 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 PMLP29590 882 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 TAF11Q15544 211 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 DARS2Q6PI48 645 aaKnown RBP3.27□□□□□ -1.89
LPP-221ENST00000618621 PADI6Q6TGC4 694 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 MTHFD1LQ6UB35 978 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 ATG9AQ7Z3C6 839 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 NLRP10Q86W26 655 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 UNKQ9C0B0 810 aaKnown RBP3.27□□□□□ -1.89
LPP-221ENST00000618621 BATF3Q9NR55 127 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 FBXO2Q9UK22 296 aaPredicted RBP3.27□□□□□ -1.89
LPP-221ENST00000618621 SOS2Q07890 1332 aaPredicted RBP3.27□□□□□ -1.89
LPP-221ENST00000618621 ABCC1P33527 1531 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 KIF28PB7ZC32 967 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 CCDC188H7C350 402 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 ZNF185O15231 689 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 DCTN3O75935 186 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 CDK8P49336 464 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 USP11P51784 963 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 SP4Q02446 784 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 ODR4Q5SWX8 454 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 RC3H1Q5TC82 1133 aaKnown RBP3.27□□□□□ -1.89
LPP-221ENST00000618621 LARP4BQ92615 738 aaKnown RBP3.27□□□□□ -1.89
LPP-221ENST00000618621 ZNF653Q96CK0 615 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 TRPC4Q9UBN4 977 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 G3BP2Q9UN86 482 aaKnown RBP3.27□□□□□ -1.89
LPP-221ENST00000618621 PPP2R2AP63151 447 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 FOXO4P98177 505 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 TCP10Q12799 353 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 GNPTABQ3T906 1256 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 FRMPD2Q68DX3 1309 aaPredicted RBP3.27□□□□□ -1.89
LPP-221ENST00000618621 NSMFQ6X4W1 530 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 ZNF577Q9BSK1 485 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 INTUQ9ULD6 942 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 SNX12Q9UMY4 172 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 PEX1O43933 1283 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 RNF8O76064 485 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 PARNO95453 639 aaKnown RBP3.27□□□□□ -1.89
LPP-221ENST00000618621 SARSP49591 514 aaKnown RBP3.27□□□□□ -1.89
LPP-221ENST00000618621 SNX1Q13596 522 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 ABCB5Q2M3G0 1257 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 SCYL2Q6P3W7 929 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 FAM133AQ8N9E0 248 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 ERLEC1Q96DZ1 483 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 DPH5Q9H2P9 285 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 SLC12A6Q9UHW9 1150 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 FRMD3A2A2Y4 597 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 ZNF233A6NK53 670 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 MCF2LO15068 1137 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 KRT19P08727 400 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 PRLRP16471 622 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 TOB1P50616 345 aaPredicted RBP3.27□□□□□ -1.89
LPP-221ENST00000618621 RCSD1Q6JBY9 416 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 STOML1Q9UBI4 398 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 SUFUQ9UMX1 484 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 THRAP3Q9Y2W1 955 aaKnown RBP3.27□□□□□ -1.89
LPP-221ENST00000618621 ARID1AO14497 2285 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 ESYT2A0FGR8 921 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 PHF20L1A8MW92 1017 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 CDC27P30260 824 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 KCNH2Q12809 1159 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 TAF12Q16514 161 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 TBC1D1Q86TI0 1168 aaPredicted RBP3.27□□□□□ -1.89
LPP-221ENST00000618621 LARGE2Q8N3Y3 721 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 ATP6V1G3Q96LB4 118 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 LRRC37BQ96QE4 947 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 TRIM56Q9BRZ2 755 aaKnown RBP3.27□□□□□ -1.89
LPP-221ENST00000618621 TRIM6Q9C030 488 aaPredicted RBP3.27□□□□□ -1.89
LPP-221ENST00000618621 ANKZF1Q9H8Y5 726 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 SLC5A4Q9NY91 659 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 WDR17Q8IZU2 1322 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 MEIS1O00470 390 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 TXNDC9O14530 226 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 YARSP54577 528 aaKnown RBP3.27□□□□□ -1.89
LPP-221ENST00000618621 SESN3P58005 492 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 SWT1Q5T5J6 900 aaKnown RBP3.27□□□□□ -1.89
LPP-221ENST00000618621 FBXW10Q5XX13 1052 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 HIBCHQ6NVY1 386 aaPredicted RBP3.27□□□□□ -1.89
LPP-221ENST00000618621 KLC3Q6P597 504 aa3.27□□□□□ -1.89
LPP-221ENST00000618621 N4BP2L2Q92802 583 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms