RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 ITIH3Q06033 890 aa10.96□□□□□ -0.65
SMARCA1-205ENST00000617310 ZNF699Q32M78 642 aa10.96□□□□□ -0.65
SMARCA1-205ENST00000617310 TCP11X2Q5H9J9 407 aa10.96□□□□□ -0.65
SMARCA1-205ENST00000617310 PPP6R3Q5H9R7 873 aaPredicted RBP10.96□□□□□ -0.65
SMARCA1-205ENST00000617310 ALKBH5Q6P6C2 394 aaKnown RBP10.96□□□□□ -0.65
SMARCA1-205ENST00000617310 CNTNAP5Q8WYK1 1306 aa10.96□□□□□ -0.65
SMARCA1-205ENST00000617310 RRP9O43818 475 aaKnown RBP10.96□□□□□ -0.65
SMARCA1-205ENST00000617310 CFAP157Q5JU67 520 aa10.96□□□□□ -0.65
SMARCA1-205ENST00000617310 ERO1BQ86YB8 467 aa10.96□□□□□ -0.65
SMARCA1-205ENST00000617310 MGARPQ8TDB4 240 aa10.96□□□□□ -0.65
SMARCA1-205ENST00000617310 MAGOHBQ96A72 148 aaKnown RBP10.96□□□□□ -0.65
SMARCA1-205ENST00000617310 HAUS1Q96CS2 278 aa10.96□□□□□ -0.65
SMARCA1-205ENST00000617310 BCL2L12Q9HB09 334 aa10.96□□□□□ -0.65
SMARCA1-205ENST00000617310 KCNH4Q9UQ05 1017 aa10.96□□□□□ -0.65
SMARCA1-205ENST00000617310 PSMC4P43686 418 aa10.96□□□□□ -0.66
SMARCA1-205ENST00000617310 KNOP1Q1ED39 458 aaKnown RBP10.96□□□□□ -0.66
SMARCA1-205ENST00000617310 INTS8Q75QN2 995 aaKnown RBP10.96□□□□□ -0.66
SMARCA1-205ENST00000617310 NBPF11Q86T75 865 aa10.96□□□□□ -0.66
SMARCA1-205ENST00000617310 RFX6Q8HWS3 928 aa10.96□□□□□ -0.66
SMARCA1-205ENST00000617310 RNF139Q8WU17 664 aa10.96□□□□□ -0.66
SMARCA1-205ENST00000617310 NUDT12Q9BQG2 462 aa10.96□□□□□ -0.66
SMARCA1-205ENST00000617310 PHF20Q9BVI0 1012 aa10.96□□□□□ -0.66
SMARCA1-205ENST00000617310 KIF9Q9HAQ2 790 aa10.96□□□□□ -0.66
SMARCA1-205ENST00000617310 NFIBO00712 420 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 CTDNEP1O95476 244 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 ATN1P54259 1190 aaPredicted RBP10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 BACE1P56817 501 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 TSTA3Q13630 321 aaPredicted RBP10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 MOB2Q70IA6 237 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 GSDMBQ8TAX9 411 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 IQCDQ96DY2 449 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 TMEM106CQ9BVX2 250 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 GCOM2Q9BZD3 368 aaPredicted RBP10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 MIS12Q9H081 205 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 KCNH7Q9NS40 1196 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 FAM217BQ9NTX9 383 aaPredicted RBP10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 C11orf70Q9BRQ4 267 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 KIFC3Q9BVG8 833 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 STMN4Q9H169 189 aaPredicted RBP10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 RBAKQ9NYW8 714 aaPredicted RBP10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 SUCLA2Q9P2R7 463 aaPredicted RBP10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 MKRN1Q9UHC7 482 aaKnown RBP10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 TEX33O43247 280 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 HUS1O60921 280 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 MOCS3O95396 460 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 VCAM1P19320 739 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 ZBED6P86452 979 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 CACNB2Q08289 660 aaPredicted RBP10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 CCDC6Q16204 474 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 DACT2Q5SW24 774 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 TEX2Q8IWB9 1127 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 RAB3IL1Q8TBN0 382 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 OPTNQ96CV9 577 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 KIF12Q96FN5 646 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 TRIM7Q9C029 511 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 HPS5Q9UPZ3 1129 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 AK9Q5TCS8 1911 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 PRKCEQ02156 737 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 TRIP13Q15645 432 aaPredicted RBP10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 ZC2HC1CQ53FD0 456 aaPredicted RBP10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 ANKRD42Q8N9B4 389 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 SCFD2Q8WU76 684 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 TRIM9Q9C026 710 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 FBXO2Q9UK22 296 aaPredicted RBP10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 AGO2Q9UKV8 859 aaKnown RBP10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 AFG3L2Q9Y4W6 797 aa10.95□□□□□ -0.66
SMARCA1-205ENST00000617310 SLC12A2P55011 1212 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 PAK2Q13177 524 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 SKA2Q8WVK7 121 aaPredicted RBP10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 ARHGAP23Q9P227 1491 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 PIK3R2O00459 728 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 STK25O00506 426 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 SH3BP5O60239 455 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 CRCPO75575 148 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 CYP2C8P10632 490 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 KIF11P52732 1056 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 ADCY1Q08828 1119 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 XKR3Q5GH77 459 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 ARMCX2Q7L311 632 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 HDXQ7Z353 690 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 MAP7D3Q8IWC1 876 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 FBXO16Q8IX29 292 aaPredicted RBP10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 ARFGAP2Q8N6H7 521 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 ZNF579Q8NAF0 562 aaKnown RBP10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 ZWILCHQ9H900 591 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 ODF2LQ9ULJ1 636 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 MAP2P11137 1827 aaKnown RBP10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 CSDE1O75534 798 aaKnown RBP10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 GUCY2DQ02846 1103 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 WDR72Q3MJ13 1102 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 ERICH1Q86X53 443 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 PALM2Q8IXS6 379 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 MB21D1Q8N884 522 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 KRT12Q99456 494 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 MRPL4Q9BYD3 311 aaKnown RBP10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 THAP9Q9H5L6 903 aa10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 NHEJ1Q9H9Q4 299 aaPredicted RBP10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 DNAJC17Q9NVM6 304 aaKnown RBP10.94□□□□□ -0.66
SMARCA1-205ENST00000617310 FEZ2Q9UHY8 353 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms