RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 ING2Q9H160 280 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 FBXL5Q9UKA1 691 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 IQANK1A0A1B0GTG1 560 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 ATF2P15336 505 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 PEX5P50542 639 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 RAPGEF5Q92565 580 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 DEPDC7Q96QD5 511 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 SLC26A6Q9BXS9 759 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 GIN1Q9NXP7 522 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 SELENONQ9NZV5 590 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 TRIM33Q9UPN9 1127 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 E9PCH4 1651 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 ABCC5O15440 1437 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 ADSLP30566 484 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-213ENST00000613099 S100A5P33763 92 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 ME3Q16798 604 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 RTN1Q16799 776 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 P3H1Q32P28 736 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 C1orf141Q5JVX7 400 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 PRR23CQ6ZRP0 262 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 RHPN1Q8TCX5 695 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 CAVIN3Q969G5 261 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 PNKPQ96T60 521 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 MYH15Q9Y2K3 1946 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 ZNF213O14771 459 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 PFKFB1P16118 471 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 IST1P53990 364 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 CEP85Q6P2H3 762 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.29□□□□□ -1.562e-6■■■■■ 34.8
VPS13D-213ENST00000613099 CCSER2Q9H7U1 834 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 MAP3K20Q9NYL2 800 aaKnown RBP5.29□□□□□ -1.56
VPS13D-213ENST00000613099 DIP2AQ14689 1571 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 NR1H2P55055 460 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 SLC39A14Q15043 492 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 GDAP1Q8TB36 358 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 CNNM2Q9H8M5 875 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 A8MXQ7 604 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 CNOT3O75175 753 aaKnown RBP5.29□□□□□ -1.56
VPS13D-213ENST00000613099 ALOX5P09917 674 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 UAP1Q16222 522 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-213ENST00000613099 COL23A1Q86Y22 540 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-213ENST00000613099 SLITRK6Q9H5Y7 841 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 RWDD2AQ9UIY3 292 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 KLF18A0A0U1RQI7 1052 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 IDH3BO43837 385 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 BAIAP3O94812 1187 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 XIAPP98170 497 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 ACAP2Q15057 778 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 CCDC125Q86Z20 511 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 FLAD1Q8NFF5 587 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 EPC1Q9H2F5 836 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 AGLP35573 1532 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 SMNDC1O75940 238 aaKnown RBP eCLIP5.29□□□□□ -1.561e-10■■□□□ 11.5
VPS13D-213ENST00000613099 BCRP11274 1271 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 CHN2P52757 468 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 SEC24CP53992 1094 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 FAPQ12884 760 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 SFR1Q86XK3 245 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 BORCS5Q969J3 196 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 ACAP3Q96P50 834 aa5.29□□□□□ -1.56
VPS13D-213ENST00000613099 ROPN1BQ9BZX4 212 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-213ENST00000613099 ROPN1Q9HAT0 212 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-213ENST00000613099 PPARGC1AQ9UBK2 798 aaKnown RBP5.29□□□□□ -1.56
VPS13D-213ENST00000613099 TNFAIP3P21580 790 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 KRT20P35900 424 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 C16orf72Q14CZ0 275 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 LIN9Q5TKA1 542 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 OLFM1Q99784 485 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 SMG5Q9UPR3 1016 aaKnown RBP5.28□□□□□ -1.56
VPS13D-213ENST00000613099 PCDHGC5Q9Y5F6 944 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 A0A0G2JND7 137 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 M0R3G1 203 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 TRAPPC3O43617 180 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 EME1Q96AY2 570 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 PRPF18Q99633 342 aaKnown RBP5.28□□□□□ -1.56
VPS13D-213ENST00000613099 RRN3Q9NYV6 651 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 CFAP99D6REC4 459 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 UPF3AQ9H1J1 476 aaKnown RBP5.28□□□□□ -1.56
VPS13D-213ENST00000613099 EHMT1Q9H9B1 1298 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 GTF3C4Q9UKN8 822 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 SAMD9LQ8IVG5 1584 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 PRLP01236 227 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 TTKP33981 857 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 RASSF7Q02833 373 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 CYTH2Q99418 400 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 SNX5Q9Y5X3 404 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 ZCCHC18P0CG32 403 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 ANGPT1Q15389 498 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 TAS2R42Q7RTR8 314 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 HDAC7Q8WUI4 952 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 CENPTQ96BT3 561 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 CMTM5Q96DZ9 223 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 METTL5Q9NRN9 209 aaKnown RBP5.28□□□□□ -1.56
VPS13D-213ENST00000613099 KLHL20Q9Y2M5 609 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 TTC37Q6PGP7 1564 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 VWA3AA6NCI4 1184 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 ZMYM1Q5SVZ6 1142 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 SNX30Q5VWJ9 437 aa5.28□□□□□ -1.56
VPS13D-213ENST00000613099 TRMT10CQ7L0Y3 403 aaKnown RBP5.28□□□□□ -1.56
VPS13D-213ENST00000613099 CRACR2BQ8N4Y2 399 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms