RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	ADAMTS10	Q9H324	1103 aa		18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	SEPT9	Q9UHD8	586 aa	Predicted RBP	18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	PPME1	Q9Y570	386 aa		18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	VTN	P04004	478 aa		18.73	■□□□□ 0.59
CCND3-222	ENST00000612455	MTERF2	Q49AM1	385 aa		18.73	■□□□□ 0.59
CCND3-222	ENST00000612455	TTC38	Q5R3I4	469 aa		18.73	■□□□□ 0.59
CCND3-222	ENST00000612455	PPP2R2D	Q66LE6	453 aa		18.73	■□□□□ 0.59
CCND3-222	ENST00000612455	MYOCD	Q8IZQ8	938 aa		18.73	■□□□□ 0.59
CCND3-222	ENST00000612455	CRIPAK	Q8N1N5	446 aa		18.73	■□□□□ 0.59
CCND3-222	ENST00000612455	LRRC71	Q8N4P6	559 aa		18.73	■□□□□ 0.59
CCND3-222	ENST00000612455	TMEM40	Q8WWA1	233 aa		18.73	■□□□□ 0.59
CCND3-222	ENST00000612455	EIF2AK1	Q9BQI3	630 aa	Known RBP	18.73	■□□□□ 0.59
CCND3-222	ENST00000612455	LXN	Q9BS40	222 aa		18.73	■□□□□ 0.59
CCND3-222	ENST00000612455	FTHL17	Q9BXU8	183 aa		18.73	■□□□□ 0.59
CCND3-222	ENST00000612455	ZSWIM4	Q9H7M6	989 aa		18.73	■□□□□ 0.59
CCND3-222	ENST00000612455	ERVK-5	Q9HDB9	667 aa		18.73	■□□□□ 0.59
CCND3-222	ENST00000612455	CYP26B1	Q9NR63	512 aa		18.73	■□□□□ 0.59
CCND3-222	ENST00000612455	SMC3	Q9UQE7	1217 aa		18.73	■□□□□ 0.59
CCND3-222	ENST00000612455	NOC2L	Q9Y3T9	749 aa	Known RBP	18.73	■□□□□ 0.59
CCND3-222	ENST00000612455	INSL6	Q9Y581	213 aa		18.73	■□□□□ 0.59
CCND3-222	ENST00000612455	LCHN	A4D1U4	455 aa		18.72	■□□□□ 0.59
CCND3-222	ENST00000612455	GNL2	Q13823	731 aa	Known RBP	18.72	■□□□□ 0.59
CCND3-222	ENST00000612455	CTTN	Q14247	550 aa	Known RBP	18.72	■□□□□ 0.59
CCND3-222	ENST00000612455	KIZ	Q2M2Z5	673 aa		18.72	■□□□□ 0.59
CCND3-222	ENST00000612455	ZNF579	Q8NAF0	562 aa	Known RBP	18.72	■□□□□ 0.59
CCND3-222	ENST00000612455	NEK9	Q8TD19	979 aa		18.72	■□□□□ 0.59
CCND3-222	ENST00000612455	SP7	Q8TDD2	431 aa	Predicted RBP	18.72	■□□□□ 0.59
CCND3-222	ENST00000612455	LINC01599	Q8WXQ3	324 aa		18.72	■□□□□ 0.59
CCND3-222	ENST00000612455	MAP7D2	Q96T17	732 aa		18.72	■□□□□ 0.59
CCND3-222	ENST00000612455	SH2D3A	Q9BRG2	576 aa		18.72	■□□□□ 0.59
CCND3-222	ENST00000612455	TMX1	Q9H3N1	280 aa		18.72	■□□□□ 0.59
CCND3-222	ENST00000612455	PRDM12	Q9H4Q4	367 aa		18.72	■□□□□ 0.59
CCND3-222	ENST00000612455	SUGCT	Q9HAC7	445 aa		18.72	■□□□□ 0.59
CCND3-222	ENST00000612455	NOL7	Q9UMY1	257 aa	Known RBP	18.72	■□□□□ 0.59
CCND3-222	ENST00000612455	RPS6KA5	O75582	802 aa		18.71	■□□□□ 0.59
CCND3-222	ENST00000612455	NPEPPS	P55786	919 aa		18.71	■□□□□ 0.59
CCND3-222	ENST00000612455	NLRP11	P59045	1033 aa	Known RBP	18.71	■□□□□ 0.59
CCND3-222	ENST00000612455	CDC42EP1	Q00587	391 aa		18.71	■□□□□ 0.59
CCND3-222	ENST00000612455	PAK2	Q13177	524 aa		18.71	■□□□□ 0.59
CCND3-222	ENST00000612455	DRP2	Q13474	957 aa		18.71	■□□□□ 0.59
CCND3-222	ENST00000612455	ODR4	Q5SWX8	454 aa		18.71	■□□□□ 0.59
CCND3-222	ENST00000612455	OTUD6A	Q7L8S5	288 aa		18.71	■□□□□ 0.59
CCND3-222	ENST00000612455	EXOC8	Q8IYI6	725 aa		18.71	■□□□□ 0.59
CCND3-222	ENST00000612455	TSPYL2	Q9H2G4	693 aa	Predicted RBP	18.71	■□□□□ 0.59
CCND3-222	ENST00000612455	DHX33	Q9H6R0	707 aa	Known RBP	18.71	■□□□□ 0.59
CCND3-222	ENST00000612455	ST3GAL5	Q9UNP4	418 aa		18.71	■□□□□ 0.59
CCND3-222	ENST00000612455	AKT3	Q9Y243	479 aa		18.71	■□□□□ 0.59
CCND3-222	ENST00000612455	ZBTB39	O15060	712 aa		18.7	■□□□□ 0.58
CCND3-222	ENST00000612455	GPR182	O15218	404 aa		18.7	■□□□□ 0.58
CCND3-222	ENST00000612455	OR52Z1	P0C646	297 aa		18.7	■□□□□ 0.58
CCND3-222	ENST00000612455	SPATA31C1	P0DKV0	1188 aa		18.7	■□□□□ 0.58
CCND3-222	ENST00000612455	XRCC6	P12956	609 aa	Known RBP eCLIP	18.7	■□□□□ 0.58
CCND3-222	ENST00000612455	YWHAB	P31946	246 aa	Known RBP	18.7	■□□□□ 0.58
CCND3-222	ENST00000612455	GPC3	P51654	580 aa		18.7	■□□□□ 0.58
CCND3-222	ENST00000612455	CYP4A11	Q02928	519 aa		18.7	■□□□□ 0.58
CCND3-222	ENST00000612455	TMEM266	Q2M3C6	531 aa		18.7	■□□□□ 0.58
CCND3-222	ENST00000612455	PLA2G4F	Q68DD2	849 aa		18.7	■□□□□ 0.58
CCND3-222	ENST00000612455	FAM117B	Q6P1L5	589 aa		18.7	■□□□□ 0.58
CCND3-222	ENST00000612455	TPH2	Q8IWU9	490 aa		18.7	■□□□□ 0.58
CCND3-222	ENST00000612455	OSMR	Q99650	979 aa		18.7	■□□□□ 0.58
CCND3-222	ENST00000612455	JPH2	Q9BR39	696 aa	Predicted RBP	18.7	■□□□□ 0.58
CCND3-222	ENST00000612455	GINS2	Q9Y248	185 aa		18.7	■□□□□ 0.58
CCND3-222	ENST00000612455	TRANK1	O15050	2925 aa		18.7	■□□□□ 0.58
CCND3-222	ENST00000612455	LINC01553	A4QN01	128 aa		18.69	■□□□□ 0.58
CCND3-222	ENST00000612455	POU3F3	P20264	500 aa	Predicted RBP	18.69	■□□□□ 0.58
CCND3-222	ENST00000612455	EIF4B	P23588	611 aa	Known RBP	18.69	■□□□□ 0.58
CCND3-222	ENST00000612455	DNM2	P50570	870 aa		18.69	■□□□□ 0.58
CCND3-222	ENST00000612455	ERVK-21	P61565	698 aa		18.69	■□□□□ 0.58
CCND3-222	ENST00000612455	NFX1	Q12986	1120 aa	Known RBP	18.69	■□□□□ 0.58
CCND3-222	ENST00000612455	ADGRE1	Q14246	886 aa		18.69	■□□□□ 0.58
CCND3-222	ENST00000612455	NBR1	Q14596	966 aa		18.69	■□□□□ 0.58
CCND3-222	ENST00000612455	LARP1B	Q659C4	914 aa	Known RBP	18.69	■□□□□ 0.58
CCND3-222	ENST00000612455	FAM228A	Q86W67	206 aa		18.69	■□□□□ 0.58
CCND3-222	ENST00000612455	CEP170P1	Q96L14	293 aa		18.69	■□□□□ 0.58
CCND3-222	ENST00000612455	RC3H2	Q9HBD1	1191 aa	Known RBP	18.69	■□□□□ 0.58
CCND3-222	ENST00000612455	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	18.69	■□□□□ 0.58
CCND3-222	ENST00000612455	ANKEF1	Q9NU02	776 aa		18.69	■□□□□ 0.58
CCND3-222	ENST00000612455	PCDHB6	Q9Y5E3	794 aa		18.69	■□□□□ 0.58
CCND3-222	ENST00000612455	POTEM	A6NI47	508 aa		18.68	■□□□□ 0.58
CCND3-222	ENST00000612455	MGEA5	O60502	916 aa		18.68	■□□□□ 0.58
CCND3-222	ENST00000612455	UPP2	O95045	317 aa		18.68	■□□□□ 0.58
CCND3-222	ENST00000612455	DARS	P14868	501 aa	Known RBP	18.68	■□□□□ 0.58
CCND3-222	ENST00000612455	FOSL2	P15408	326 aa		18.68	■□□□□ 0.58
CCND3-222	ENST00000612455	RFC5	P40937	340 aa		18.68	■□□□□ 0.58
CCND3-222	ENST00000612455	TEC	P42680	631 aa		18.68	■□□□□ 0.58
CCND3-222	ENST00000612455	FXR2	P51116	673 aa	Known RBP eCLIP	18.68	■□□□□ 0.58
CCND3-222	ENST00000612455	PDIA5	Q14554	519 aa		18.68	■□□□□ 0.58
CCND3-222	ENST00000612455	DSC3	Q14574	896 aa		18.68	■□□□□ 0.58
CCND3-222	ENST00000612455	SPRED2	Q7Z698	418 aa		18.68	■□□□□ 0.58
CCND3-222	ENST00000612455	ZNF689	Q96CS4	500 aa	Predicted RBP	18.68	■□□□□ 0.58
CCND3-222	ENST00000612455	PPP1R16B	Q96T49	567 aa		18.68	■□□□□ 0.58
CCND3-222	ENST00000612455	GAS2L1	Q99501	681 aa	Predicted RBP	18.68	■□□□□ 0.58
CCND3-222	ENST00000612455	POLR3C	Q9BUI4	534 aa	Predicted RBP	18.68	■□□□□ 0.58
CCND3-222	ENST00000612455	TUFT1	Q9NNX1	390 aa		18.68	■□□□□ 0.58
CCND3-222	ENST00000612455	SUCLA2	Q9P2R7	463 aa	Predicted RBP	18.68	■□□□□ 0.58
CCND3-222	ENST00000612455	COL4A6	Q14031	1691 aa		18.68	■□□□□ 0.58
CCND3-222	ENST00000612455	ARID2	Q68CP9	1835 aa		18.67	■□□□□ 0.58
CCND3-222	ENST00000612455	EPOP	A6NHQ4	379 aa		18.67	■□□□□ 0.58
CCND3-222	ENST00000612455		H3BQV1	296 aa		18.67	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms