RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 RAD17O75943 681 aa18.8■□□□□ 0.6
NEK3-206ENST00000611833 ANXA13P27216 316 aa18.8■□□□□ 0.6
NEK3-206ENST00000611833 FOXR1Q6PIV2 292 aa18.8■□□□□ 0.6
NEK3-206ENST00000611833 AJAP1Q9UKB5 411 aaPredicted RBP18.8■□□□□ 0.6
NEK3-206ENST00000611833 SHTN1A0MZ66 631 aa18.8■□□□□ 0.6
NEK3-206ENST00000611833 GTPBP10A4D1E9 387 aaKnown RBP18.8■□□□□ 0.6
NEK3-206ENST00000611833 KIF4AO95239 1232 aa18.8■□□□□ 0.6
NEK3-206ENST00000611833 JAM2P57087 298 aa18.8■□□□□ 0.6
NEK3-206ENST00000611833 SLC15A2Q16348 729 aa18.8■□□□□ 0.6
NEK3-206ENST00000611833 SAMD1Q6SPF0 538 aaPredicted RBP18.8■□□□□ 0.6
NEK3-206ENST00000611833 KLHL7Q8IXQ5 586 aa18.8■□□□□ 0.6
NEK3-206ENST00000611833 PBKQ96KB5 322 aa18.8■□□□□ 0.6
NEK3-206ENST00000611833 SH3GL2Q99962 352 aa18.8■□□□□ 0.6
NEK3-206ENST00000611833 GOLPH3Q9H4A6 298 aa18.8■□□□□ 0.6
NEK3-206ENST00000611833 WRAP73Q9P2S5 460 aaPredicted RBP18.8■□□□□ 0.6
NEK3-206ENST00000611833 CES2O00748 559 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 H2AFZP0C0S5 128 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 FERP16591 822 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 PRELPP51888 382 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 DLGAP5Q15398 846 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 CEP55Q53EZ4 464 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 H2AFVQ71UI9 128 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 TEX2Q8IWB9 1127 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 CHURC1Q8WUH1 139 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 BORCS6Q96GS4 357 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 VCPKMTQ9H867 229 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 EHMT1Q9H9B1 1298 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 CEP104O60308 925 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 GFPT2O94808 682 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 VIL1P09327 827 aaKnown RBP18.79■□□□□ 0.6
NEK3-206ENST00000611833 STAT1P42224 750 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 IRX5P78411 483 aaPredicted RBP18.79■□□□□ 0.6
NEK3-206ENST00000611833 PTPROQ16827 1216 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 STXBP4Q6ZWJ1 553 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 HS2ST1Q7LGA3 356 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 KSR1Q8IVT5 923 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 LMBR1Q8WVP7 490 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 FIZ1Q96SL8 496 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 GMLQ99445 158 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 FBXO28Q9NVF7 368 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 RSPH14Q9UHP6 348 aa18.79■□□□□ 0.6
NEK3-206ENST00000611833 ZBTB12Q9Y330 459 aaPredicted RBP18.79■□□□□ 0.6
NEK3-206ENST00000611833 TMCO5BA8MYB1 307 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 FAM153BP0C7A2 387 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 ARP10275 920 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 FAM153CQ494X1 144 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 FAM178BQ8IXR5 827 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 LRRC57Q8N9N7 239 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 TPCN2Q8NHX9 752 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 U2AF1L4Q8WU68 220 aaKnown RBP18.78■□□□□ 0.6
NEK3-206ENST00000611833 NACC1Q96RE7 527 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 ZNF577Q9BSK1 485 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 FAM153AQ9UHL3 310 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 MRPL11Q9Y3B7 192 aaKnown RBP18.78■□□□□ 0.6
NEK3-206ENST00000611833 GUCY2FP51841 1108 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 CFAP58Q5T655 872 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 MIGA2Q7L4E1 593 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 SRLQ86TD4 932 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 CASKIN2Q8WXE0 1202 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 CCDC43Q96MW1 224 aaKnown RBP18.78■□□□□ 0.6
NEK3-206ENST00000611833 ZIM3Q96PE6 472 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 GLIS2Q9BZE0 524 aaPredicted RBP18.78■□□□□ 0.6
NEK3-206ENST00000611833 TMEM39BQ9GZU3 492 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 UNC45AQ9H3U1 944 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 SEL1LQ9UBV2 794 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 FRMD4BQ9Y2L6 1034 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 RRP15Q9Y3B9 282 aaKnown RBP18.78■□□□□ 0.6
NEK3-206ENST00000611833 FRMPD4Q14CM0 1322 aa18.78■□□□□ 0.6
NEK3-206ENST00000611833 RAD51CO43502 376 aa18.77■□□□□ 0.6
NEK3-206ENST00000611833 CYP2J2P51589 502 aa18.77■□□□□ 0.6
NEK3-206ENST00000611833 COG2Q14746 738 aa18.77■□□□□ 0.6
NEK3-206ENST00000611833 SPDYE2Q495Y8 402 aa18.77■□□□□ 0.6
NEK3-206ENST00000611833 ZNF720Q7Z2F6 126 aa18.77■□□□□ 0.6
NEK3-206ENST00000611833 PEX26Q7Z412 305 aa18.77■□□□□ 0.6
NEK3-206ENST00000611833 VEZTQ9HBM0 779 aa18.77■□□□□ 0.6
NEK3-206ENST00000611833 LCMT1Q9UIC8 334 aa18.77■□□□□ 0.6
NEK3-206ENST00000611833 COL4A5P29400 1685 aa18.77■□□□□ 0.59
NEK3-206ENST00000611833 TNS1Q9HBL0 1735 aaKnown RBP18.77■□□□□ 0.59
NEK3-206ENST00000611833 DDX3XO00571 662 aaKnown RBP eCLIP18.77■□□□□ 0.592e-8■□□□□ 8.3
NEK3-206ENST00000611833 SHOX2O60902 331 aaPredicted RBP18.77■□□□□ 0.59
NEK3-206ENST00000611833 PPFIA4O75335 1185 aa18.77■□□□□ 0.59
NEK3-206ENST00000611833 FMO5P49326 533 aa18.77■□□□□ 0.59
NEK3-206ENST00000611833 NFIL3Q16649 462 aa18.77■□□□□ 0.59
NEK3-206ENST00000611833 ODR4Q5SWX8 454 aa18.77■□□□□ 0.59
NEK3-206ENST00000611833 LDHDQ86WU2 507 aa18.77■□□□□ 0.59
NEK3-206ENST00000611833 MKNK1Q9BUB5 465 aa18.77■□□□□ 0.59
NEK3-206ENST00000611833 WDR11Q9BZH6 1224 aa18.77■□□□□ 0.59
NEK3-206ENST00000611833 TMEM59LQ9UK28 342 aa18.77■□□□□ 0.59
NEK3-206ENST00000611833 MYO1CO00159 1063 aa18.76■□□□□ 0.59
NEK3-206ENST00000611833 EVI5O60447 810 aa18.76■□□□□ 0.59
NEK3-206ENST00000611833 ZNF131P52739 623 aa18.76■□□□□ 0.59
NEK3-206ENST00000611833 B3GNT9Q6UX72 402 aa18.76■□□□□ 0.59
NEK3-206ENST00000611833 OGFOD1Q8N543 542 aa18.76■□□□□ 0.59
NEK3-206ENST00000611833 ACTRT1Q8TDG2 376 aa18.76■□□□□ 0.59
NEK3-206ENST00000611833 ARL8AQ96BM9 186 aa18.76■□□□□ 0.59
NEK3-206ENST00000611833 CAPS2Q9BXY5 557 aa18.76■□□□□ 0.59
NEK3-206ENST00000611833 INTUQ9ULD6 942 aa18.76■□□□□ 0.59
NEK3-206ENST00000611833 PLA2G6O60733 806 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 SOX5P35711 763 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 SKIDA1Q1XH10 827 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms