RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 CSDE1O75534 798 aaKnown RBP9.75□□□□□ -0.85
SNCA-212ENST00000611107 PARNO95453 639 aaKnown RBP9.75□□□□□ -0.85
SNCA-212ENST00000611107 OATP04181 439 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 SYT1P21579 422 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 IGFBP4P22692 258 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 GRB10Q13322 594 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 ZNF484Q5JVG2 852 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 LARP1BQ659C4 914 aaKnown RBP9.75□□□□□ -0.85
SNCA-212ENST00000611107 PPP4R3AQ6IN85 833 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 TAF2Q6P1X5 1199 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 TSHZ1Q6ZSZ6 1077 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 ANO5Q75V66 913 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 FAM228AQ86W67 206 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 CKAP2LQ8IYA6 745 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 SMAP1Q8IYB5 467 aaPredicted RBP9.75□□□□□ -0.85
SNCA-212ENST00000611107 SP7Q8TDD2 431 aaPredicted RBP9.75□□□□□ -0.85
SNCA-212ENST00000611107 BBXQ8WY36 941 aaPredicted RBP9.75□□□□□ -0.85
SNCA-212ENST00000611107 TOP1MTQ969P6 601 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 OSMRQ99650 979 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 ADAMTS10Q9H324 1103 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 SUGCTQ9HAC7 445 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 GINS2Q9Y248 185 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 SAMM50Q9Y512 469 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 MTCH2Q9Y6C9 303 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 COL1A2P08123 1366 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 RALGAPA2Q2PPJ7 1873 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 PLXNA4Q9HCM2 1894 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 CUL9Q8IWT3 2517 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 H3BQV1 296 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 GCFC2P16383 781 aaKnown RBP9.74□□□□□ -0.85
SNCA-212ENST00000611107 ATP2B1P20020 1258 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 PDCP20941 246 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 SLC26A2P50443 739 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 PPP2R5CQ13362 524 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 MTERF2Q49AM1 385 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 MCTP1Q6DN14 999 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 EFCAB12Q6NXP0 572 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 KSR1Q8IVT5 923 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 SPRYD3Q8NCJ5 442 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 DYDC2Q96IM9 177 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 MTMR9Q96QG7 549 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 RAD9AQ99638 391 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 BMP2KQ9NSY1 1161 aaPredicted RBP9.74□□□□□ -0.85
SNCA-212ENST00000611107 MTMR6Q9Y217 621 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 KDM3AQ9Y4C1 1321 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 TTC28Q96AY4 2481 aa9.74□□□□□ -0.85
SNCA-212ENST00000611107 IGKV6-21A0A0C4DH24 114 aa9.73□□□□□ -0.85
SNCA-212ENST00000611107 DDX11L8A8MPP1 907 aa9.73□□□□□ -0.85
SNCA-212ENST00000611107 AMHP03971 560 aa9.73□□□□□ -0.85
SNCA-212ENST00000611107 HSP90AA1P07900 732 aaKnown RBP9.73□□□□□ -0.85
SNCA-212ENST00000611107 IBSPP21815 317 aaPredicted RBP9.73□□□□□ -0.85
SNCA-212ENST00000611107 TOB1P50616 345 aaPredicted RBP9.73□□□□□ -0.85
SNCA-212ENST00000611107 JAK3P52333 1124 aa9.73□□□□□ -0.85
SNCA-212ENST00000611107 NLRP11P59045 1033 aaKnown RBP9.73□□□□□ -0.85
SNCA-212ENST00000611107 ERVK-21P61565 698 aa9.73□□□□□ -0.85
SNCA-212ENST00000611107 RESTQ13127 1097 aa9.73□□□□□ -0.85
SNCA-212ENST00000611107 GNL2Q13823 731 aaKnown RBP9.73□□□□□ -0.85
SNCA-212ENST00000611107 PKP1Q13835 747 aa9.73□□□□□ -0.85
SNCA-212ENST00000611107 CTTNQ14247 550 aaKnown RBP9.73□□□□□ -0.85
SNCA-212ENST00000611107 DSC3Q14574 896 aa9.73□□□□□ -0.85
SNCA-212ENST00000611107 TTC38Q5R3I4 469 aa9.73□□□□□ -0.85
SNCA-212ENST00000611107 FERMT3Q86UX7 667 aa9.73□□□□□ -0.85
SNCA-212ENST00000611107 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.73□□□□□ -0.85
SNCA-212ENST00000611107 MICALL1Q8N3F8 863 aa9.73□□□□□ -0.85
SNCA-212ENST00000611107 METTL13Q8N6R0 699 aa9.73□□□□□ -0.85
SNCA-212ENST00000611107 C4orf32Q8N8J7 132 aa9.73□□□□□ -0.85
SNCA-212ENST00000611107 ZNF689Q96CS4 500 aaPredicted RBP9.73□□□□□ -0.85
SNCA-212ENST00000611107 ZBED2Q9BTP6 218 aa9.73□□□□□ -0.85
SNCA-212ENST00000611107 NIFKQ9BYG3 293 aaKnown RBP9.73□□□□□ -0.85
SNCA-212ENST00000611107 RNF19AQ9NV58 838 aa9.73□□□□□ -0.85
SNCA-212ENST00000611107 SEPT9Q9UHD8 586 aaPredicted RBP9.73□□□□□ -0.85
SNCA-212ENST00000611107 ST3GAL5Q9UNP4 418 aa9.73□□□□□ -0.85
SNCA-212ENST00000611107 POTEMA6NI47 508 aa9.72□□□□□ -0.85
SNCA-212ENST00000611107 STX6O43752 255 aa9.72□□□□□ -0.85
SNCA-212ENST00000611107 NEMFO60524 1076 aa9.72□□□□□ -0.85
SNCA-212ENST00000611107 SFNP31947 248 aa9.72□□□□□ -0.85
SNCA-212ENST00000611107 TRAPPC10P48553 1259 aa9.72□□□□□ -0.85
SNCA-212ENST00000611107 GPC3P51654 580 aa9.72□□□□□ -0.85
SNCA-212ENST00000611107 CYP4A11Q02928 519 aa9.72□□□□□ -0.85
SNCA-212ENST00000611107 NFX1Q12986 1120 aaKnown RBP9.72□□□□□ -0.85
SNCA-212ENST00000611107 BECN1Q14457 450 aa9.72□□□□□ -0.85
SNCA-212ENST00000611107 ZNF174Q15697 407 aa9.72□□□□□ -0.85
SNCA-212ENST00000611107 IER5Q5VY09 327 aa9.72□□□□□ -0.85
SNCA-212ENST00000611107 NCAPH2Q6IBW4 605 aa9.72□□□□□ -0.85
SNCA-212ENST00000611107 FAM20AQ96MK3 541 aa9.72□□□□□ -0.85
SNCA-212ENST00000611107 GAS2L1Q99501 681 aaPredicted RBP9.72□□□□□ -0.85
SNCA-212ENST00000611107 NAP1L4Q99733 375 aaKnown RBP9.72□□□□□ -0.85
SNCA-212ENST00000611107 TSPYL2Q9H2G4 693 aaPredicted RBP9.72□□□□□ -0.85
SNCA-212ENST00000611107 XPNPEP1Q9NQW7 623 aa9.72□□□□□ -0.85
SNCA-212ENST00000611107 PCDHB6Q9Y5E3 794 aa9.72□□□□□ -0.85
SNCA-212ENST00000611107 C9IYK1 514 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 DGKIO75912 1065 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 SLITRK3O94933 977 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 SPATA31C1P0DKV0 1188 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 POU3F3P20264 500 aaPredicted RBP9.71□□□□□ -0.86
SNCA-212ENST00000611107 DNAJB1P25685 340 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 MCM7P33993 719 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 CRYBB1P53674 252 aaPredicted RBP9.71□□□□□ -0.86
SNCA-212ENST00000611107 PSMC5P62195 406 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 TFF2Q03403 129 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms