RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 TPRNQ4KMQ1 711 aa11.37□□□□□ -0.59
HIF3A-219ENST00000600879 KCNT2Q6UVM3 1135 aa11.37□□□□□ -0.59
HIF3A-219ENST00000600879 TRMT1LQ7Z2T5 733 aaKnown RBP11.37□□□□□ -0.59
HIF3A-219ENST00000600879 RALYLQ86SE5 291 aaKnown RBP11.37□□□□□ -0.59
HIF3A-219ENST00000600879 FAM228AQ86W67 206 aa11.37□□□□□ -0.59
HIF3A-219ENST00000600879 RAB11FIP4Q86YS3 637 aa11.37□□□□□ -0.59
HIF3A-219ENST00000600879 CCDC105Q8IYK2 499 aa11.37□□□□□ -0.59
HIF3A-219ENST00000600879 SIX5Q8N196 739 aa11.37□□□□□ -0.59
HIF3A-219ENST00000600879 NME8Q8N427 588 aa11.37□□□□□ -0.59
HIF3A-219ENST00000600879 DTWD2Q8NBA8 298 aa11.37□□□□□ -0.59
HIF3A-219ENST00000600879 CYP2W1Q8TAV3 490 aa11.37□□□□□ -0.59
HIF3A-219ENST00000600879 RASGRP4Q8TDF6 673 aa11.37□□□□□ -0.59
HIF3A-219ENST00000600879 PGBD1Q96JS3 809 aa11.37□□□□□ -0.59
HIF3A-219ENST00000600879 NGRNQ9NPE2 291 aaKnown RBP11.37□□□□□ -0.59
HIF3A-219ENST00000600879 C1orf112Q9NSG2 853 aa11.37□□□□□ -0.59
HIF3A-219ENST00000600879 DBR1Q9UK59 544 aaKnown RBP11.37□□□□□ -0.59
HIF3A-219ENST00000600879 NCOR2Q9Y618 2525 aa11.37□□□□□ -0.59
HIF3A-219ENST00000600879 ZFHX4Q86UP3 3567 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 C2orf71A6NGG8 1288 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 SPDYE3A6NKU9 549 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 NT5C1B-RDH14C9J2C7 533 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 STK25O00506 426 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 BACH1O14867 736 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 VTNP04004 478 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 EPCAMP16422 314 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 RXRAP19793 462 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 AOC1P19801 751 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 ANTXR2P58335 489 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 PLCB3Q01970 1234 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 PTH1RQ03431 593 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 SART3Q15020 963 aaKnown RBP11.36□□□□□ -0.59
HIF3A-219ENST00000600879 TMC5Q6UXY8 1006 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 KIAA0319LQ8IZA0 1049 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 CCDC82Q8N4S0 544 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 ST13P5Q8NFI4 369 aaPredicted RBP11.36□□□□□ -0.59
HIF3A-219ENST00000600879 CTCFLQ8NI51 663 aaPredicted RBP11.36□□□□□ -0.59
HIF3A-219ENST00000600879 TNPO1Q92973 898 aaKnown RBP11.36□□□□□ -0.59
HIF3A-219ENST00000600879 ZNF558Q96NG5 402 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 NECTIN4Q96NY8 510 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 CASD1Q96PB1 797 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 SDF4Q9BRK5 362 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 SPZ1Q9BXG8 430 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 TMEM117Q9H0C3 514 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 KCNH7Q9NS40 1196 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 RNF19AQ9NV58 838 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 TMEM161AQ9NX61 479 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 FBXL21Q9UKT6 434 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 PCDHA6Q9UN73 950 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 LZTS1Q9Y250 596 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 PCDHA8Q9Y5H6 950 aa11.36□□□□□ -0.59
HIF3A-219ENST00000600879 E7EWF7 191 aa11.35□□□□□ -0.59
HIF3A-219ENST00000600879 GPR182O15218 404 aa11.35□□□□□ -0.59
HIF3A-219ENST00000600879 LMNAP02545 664 aaKnown RBP11.35□□□□□ -0.59
HIF3A-219ENST00000600879 MYBP10242 640 aa11.35□□□□□ -0.59
HIF3A-219ENST00000600879 MTHFRP42898 656 aa11.35□□□□□ -0.59
HIF3A-219ENST00000600879 METAP2P50579 478 aaKnown RBP eCLIP11.35□□□□□ -0.59
HIF3A-219ENST00000600879 KRT17Q04695 432 aa11.35□□□□□ -0.59
HIF3A-219ENST00000600879 ITIH3Q06033 890 aa11.35□□□□□ -0.59
HIF3A-219ENST00000600879 ITGB3BPQ13352 177 aaPredicted RBP11.35□□□□□ -0.59
HIF3A-219ENST00000600879 SMC1AQ14683 1233 aaKnown RBP11.35□□□□□ -0.59
HIF3A-219ENST00000600879 SPECC1Q5M775 1068 aa11.35□□□□□ -0.59
HIF3A-219ENST00000600879 PLPPR4Q7Z2D5 763 aa11.35□□□□□ -0.59
HIF3A-219ENST00000600879 ZNF654Q8IZM8 581 aa11.35□□□□□ -0.59
HIF3A-219ENST00000600879 ABI1Q8IZP0 508 aa11.35□□□□□ -0.59
HIF3A-219ENST00000600879 SRBD1Q8N5C6 995 aaKnown RBP11.35□□□□□ -0.59
HIF3A-219ENST00000600879 MRPL43Q8N983 215 aaKnown RBP11.35□□□□□ -0.59
HIF3A-219ENST00000600879 RSAD2Q8WXG1 361 aa11.35□□□□□ -0.59
HIF3A-219ENST00000600879 ZNF668Q96K58 619 aaPredicted RBP11.35□□□□□ -0.59
HIF3A-219ENST00000600879 MXRA8Q9BRK3 442 aa11.35□□□□□ -0.59
HIF3A-219ENST00000600879 SPG21Q9NZD8 308 aa11.35□□□□□ -0.59
HIF3A-219ENST00000600879 MYO10Q9HD67 2058 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 ZNF292O60281 2723 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.34□□□□□ -0.59
HIF3A-219ENST00000600879 CXCL14O95715 111 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 EOMESO95936 686 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 CFHP08603 1231 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 KIF5BP33176 963 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 PPM1AP35813 382 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 FAM189BP81408 668 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 DSC3Q14574 896 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 NFXL1Q6ZNB6 911 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 HEATR3Q7Z4Q2 680 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 TMEM173Q86WV6 379 aaPredicted RBP11.34□□□□□ -0.59
HIF3A-219ENST00000600879 ZDHHC14Q8IZN3 488 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 LRRC43Q8N309 656 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 METTL13Q8N6R0 699 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 TMEM87AQ8NBN3 555 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 NCOA7Q8NI08 942 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 HELQQ8TDG4 1101 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 IGDCC4Q8TDY8 1250 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 OSBPL3Q9H4L5 887 aa11.34□□□□□ -0.59
HIF3A-219ENST00000600879 RNF216Q9NWF9 866 aaPredicted RBP11.34□□□□□ -0.59
HIF3A-219ENST00000600879 RALYQ9UKM9 306 aaKnown RBP11.34□□□□□ -0.59
HIF3A-219ENST00000600879 U3KPZ7 1027 aaPredicted RBP11.34□□□□□ -0.59
HIF3A-219ENST00000600879 EP300Q09472 2414 aaPredicted RBP11.34□□□□□ -0.59
HIF3A-219ENST00000600879 FRYLO94915 3013 aa11.33□□□□□ -0.6
HIF3A-219ENST00000600879 MAFGO15525 162 aa11.33□□□□□ -0.6
HIF3A-219ENST00000600879 HBP1O60381 514 aa11.33□□□□□ -0.6
HIF3A-219ENST00000600879 CCNE2O96020 404 aa11.33□□□□□ -0.6
HIF3A-219ENST00000600879 DCNP07585 359 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms