RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 PRKCEQ02156 737 aa17.81■□□□□ 0.44
VRK3-221ENST00000600284 INF2Q27J81 1249 aa17.81■□□□□ 0.44
VRK3-221ENST00000600284 KIZQ2M2Z5 673 aa17.81■□□□□ 0.44
VRK3-221ENST00000600284 PPP4R3AQ6IN85 833 aa17.81■□□□□ 0.44
VRK3-221ENST00000600284 SLC24A5Q71RS6 500 aa17.81■□□□□ 0.44
VRK3-221ENST00000600284 P2RX5Q93086 422 aa17.81■□□□□ 0.44
VRK3-221ENST00000600284 NAP1L4Q99733 375 aaKnown RBP17.81■□□□□ 0.44
VRK3-221ENST00000600284 NIFKQ9BYG3 293 aaKnown RBP17.81■□□□□ 0.44
VRK3-221ENST00000600284 NSUN3Q9H649 340 aaKnown RBP17.81■□□□□ 0.44
VRK3-221ENST00000600284 DDX25Q9UHL0 483 aaKnown RBP17.81■□□□□ 0.44
VRK3-221ENST00000600284 PCDHB7Q9Y5E2 793 aa17.81■□□□□ 0.44
VRK3-221ENST00000600284 DENND3A2RUS2 1198 aa17.8■□□□□ 0.44
VRK3-221ENST00000600284 NCK2O43639 380 aa17.8■□□□□ 0.44
VRK3-221ENST00000600284 VTNP04004 478 aa17.8■□□□□ 0.44
VRK3-221ENST00000600284 GCFC2P16383 781 aaKnown RBP17.8■□□□□ 0.44
VRK3-221ENST00000600284 CDC42EP1Q00587 391 aa17.8■□□□□ 0.44
VRK3-221ENST00000600284 TARBP2Q15633 366 aaKnown RBP17.8■□□□□ 0.44
VRK3-221ENST00000600284 UGCGQ16739 394 aa17.8■□□□□ 0.44
VRK3-221ENST00000600284 LEXMQ3ZCV2 418 aa17.8■□□□□ 0.44
VRK3-221ENST00000600284 XKR3Q5GH77 459 aa17.8■□□□□ 0.44
VRK3-221ENST00000600284 NEK8Q86SG6 692 aa17.8■□□□□ 0.44
VRK3-221ENST00000600284 GJA10Q969M2 543 aa17.8■□□□□ 0.44
VRK3-221ENST00000600284 FAM20AQ96MK3 541 aa17.8■□□□□ 0.44
VRK3-221ENST00000600284 OSMRQ99650 979 aa17.8■□□□□ 0.44
VRK3-221ENST00000600284 ADAM2Q99965 735 aa17.8■□□□□ 0.44
VRK3-221ENST00000600284 ADAMTS10Q9H324 1103 aa17.8■□□□□ 0.44
VRK3-221ENST00000600284 AKT3Q9Y243 479 aa17.8■□□□□ 0.44
VRK3-221ENST00000600284 EVPLQ92817 2033 aa17.79■□□□□ 0.44
VRK3-221ENST00000600284 C9IYK1 514 aa17.79■□□□□ 0.44
VRK3-221ENST00000600284 MGEA5O60502 916 aa17.79■□□□□ 0.44
VRK3-221ENST00000600284 CTDNEP1O95476 244 aa17.79■□□□□ 0.44
VRK3-221ENST00000600284 CLCN3P51790 818 aa17.79■□□□□ 0.44
VRK3-221ENST00000600284 NLRP11P59045 1033 aaKnown RBP17.79■□□□□ 0.44
VRK3-221ENST00000600284 FAM189BP81408 668 aa17.79■□□□□ 0.44
VRK3-221ENST00000600284 TBC1D8BQ0IIM8 1120 aa17.79■□□□□ 0.44
VRK3-221ENST00000600284 COL19A1Q14993 1142 aa17.79■□□□□ 0.44
VRK3-221ENST00000600284 LETM2Q2VYF4 491 aa17.79■□□□□ 0.44
VRK3-221ENST00000600284 FAM228AQ86W67 206 aa17.79■□□□□ 0.44
VRK3-221ENST00000600284 ELAC1Q9H777 363 aaKnown RBP17.79■□□□□ 0.44
VRK3-221ENST00000600284 ORC3Q9UBD5 711 aaPredicted RBP17.79■□□□□ 0.44
VRK3-221ENST00000600284 MRPL42Q9Y6G3 142 aaKnown RBP17.79■□□□□ 0.44
VRK3-221ENST00000600284 NLRC5Q86WI3 1866 aa17.79■□□□□ 0.44
VRK3-221ENST00000600284 MUC3AQ02505 3323 aa17.79■□□□□ 0.44
VRK3-221ENST00000600284 LOXHD1Q8IVV2 1947 aa17.78■□□□□ 0.44
VRK3-221ENST00000600284 TBX3O15119 743 aa17.78■□□□□ 0.44
VRK3-221ENST00000600284 GRM6O15303 877 aa17.78■□□□□ 0.44
VRK3-221ENST00000600284 EIF4BP23588 611 aaKnown RBP17.78■□□□□ 0.44
VRK3-221ENST00000600284 PPP2R5CQ13362 524 aa17.78■□□□□ 0.44
VRK3-221ENST00000600284 PUS10Q3MIT2 529 aaKnown RBP17.78■□□□□ 0.44
VRK3-221ENST00000600284 TCEAL5Q5H9L2 206 aa17.78■□□□□ 0.44
VRK3-221ENST00000600284 PABPC5Q96DU9 382 aaKnown RBP17.78■□□□□ 0.44
VRK3-221ENST00000600284 KCNMB3Q9NPA1 279 aa17.78■□□□□ 0.44
VRK3-221ENST00000600284 PLAGL2Q9UPG8 496 aa17.78■□□□□ 0.44
VRK3-221ENST00000600284 SLC37A4O43826 429 aa17.77■□□□□ 0.44
VRK3-221ENST00000600284 DKC1O60832 514 aaKnown RBP eCLIP17.77■□□□□ 0.44
VRK3-221ENST00000600284 STBD1O95210 358 aa17.77■□□□□ 0.44
VRK3-221ENST00000600284 MMP1P03956 469 aa17.77■□□□□ 0.44
VRK3-221ENST00000600284 KCNA5P22460 613 aa17.77■□□□□ 0.44
VRK3-221ENST00000600284 DNM2P50570 870 aa17.77■□□□□ 0.44
VRK3-221ENST00000600284 PSMC5P62195 406 aa17.77■□□□□ 0.44
VRK3-221ENST00000600284 DSC3Q14574 896 aa17.77■□□□□ 0.44
VRK3-221ENST00000600284 ME3Q16798 604 aa17.77■□□□□ 0.44
VRK3-221ENST00000600284 LRRC71Q8N4P6 559 aa17.77■□□□□ 0.44
VRK3-221ENST00000600284 NEK9Q8TD19 979 aa17.77■□□□□ 0.44
VRK3-221ENST00000600284 GTF3C6Q969F1 213 aa17.77■□□□□ 0.44
VRK3-221ENST00000600284 NECAB3Q96P71 396 aaPredicted RBP17.77■□□□□ 0.44
VRK3-221ENST00000600284 CEP89Q96ST8 783 aa17.77■□□□□ 0.44
VRK3-221ENST00000600284 PPP1R16BQ96T49 567 aa17.77■□□□□ 0.44
VRK3-221ENST00000600284 BRMS1Q9HCU9 246 aa17.77■□□□□ 0.44
VRK3-221ENST00000600284 TMEM161AQ9NX61 479 aa17.77■□□□□ 0.44
VRK3-221ENST00000600284 NCOR1O75376 2440 aa17.76■□□□□ 0.43
VRK3-221ENST00000600284 IGKV6-21A0A0C4DH24 114 aa17.76■□□□□ 0.43
VRK3-221ENST00000600284 FDPSP14324 419 aaKnown RBP17.76■□□□□ 0.43
VRK3-221ENST00000600284 ZSCAN20P17040 1043 aaPredicted RBP17.76■□□□□ 0.43
VRK3-221ENST00000600284 GPC3P51654 580 aa17.76■□□□□ 0.43
VRK3-221ENST00000600284 NEK4P51957 841 aa17.76■□□□□ 0.43
VRK3-221ENST00000600284 PIK3AP1Q6ZUJ8 805 aa17.76■□□□□ 0.43
VRK3-221ENST00000600284 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.76■□□□□ 0.43
VRK3-221ENST00000600284 OXER1Q8TDS5 423 aa17.76■□□□□ 0.43
VRK3-221ENST00000600284 JPH2Q9BR39 696 aaPredicted RBP17.76■□□□□ 0.43
VRK3-221ENST00000600284 ATP6V0A4Q9HBG4 840 aa17.76■□□□□ 0.43
VRK3-221ENST00000600284 AAASQ9NRG9 546 aa17.76■□□□□ 0.43
VRK3-221ENST00000600284 SEPT9Q9UHD8 586 aaPredicted RBP17.76■□□□□ 0.43
VRK3-221ENST00000600284 TCF20Q9UGU0 1960 aaKnown RBP17.76■□□□□ 0.43
VRK3-221ENST00000600284 WDR81Q562E7 1941 aa17.76■□□□□ 0.43
VRK3-221ENST00000600284 HOXA2O43364 376 aa17.75■□□□□ 0.43
VRK3-221ENST00000600284 CCNT1O60563 726 aaKnown RBP17.75■□□□□ 0.43
VRK3-221ENST00000600284 CENPBP07199 599 aaPredicted RBP17.75■□□□□ 0.43
VRK3-221ENST00000600284 DARSP14868 501 aaKnown RBP17.75■□□□□ 0.43
VRK3-221ENST00000600284 QARSP47897 775 aaKnown RBP17.75■□□□□ 0.43
VRK3-221ENST00000600284 MTERF2Q49AM1 385 aa17.75■□□□□ 0.43
VRK3-221ENST00000600284 PAN2Q504Q3 1202 aaKnown RBP17.75■□□□□ 0.43
VRK3-221ENST00000600284 EXOC8Q8IYI6 725 aa17.75■□□□□ 0.43
VRK3-221ENST00000600284 SPPL3Q8TCT6 385 aa17.75■□□□□ 0.43
VRK3-221ENST00000600284 ALG13Q9NP73 1137 aaKnown RBP17.75■□□□□ 0.43
VRK3-221ENST00000600284 GJB4Q9NTQ9 266 aa17.75■□□□□ 0.43
VRK3-221ENST00000600284 VAV3Q9UKW4 847 aa17.75■□□□□ 0.43
VRK3-221ENST00000600284 PPME1Q9Y570 386 aa17.75■□□□□ 0.43
VRK3-221ENST00000600284 PCDHB12Q9Y5F1 795 aa17.75■□□□□ 0.43
VRK3-221ENST00000600284 TBKBP1A7MCY6 615 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms