RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 EPCAMP16422 314 aa15.75■□□□□ 0.11
SHKBP1-208ENST00000595726 KLRC1P26715 233 aa15.75■□□□□ 0.11
SHKBP1-208ENST00000595726 NT5C2P49902 561 aa15.75■□□□□ 0.11
SHKBP1-208ENST00000595726 MFAP1P55081 439 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-208ENST00000595726 FAM189BP81408 668 aa15.75■□□□□ 0.11
SHKBP1-208ENST00000595726 SMC1AQ14683 1233 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-208ENST00000595726 CWC27Q6UX04 472 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-208ENST00000595726 TMC5Q6UXY8 1006 aa15.75■□□□□ 0.11
SHKBP1-208ENST00000595726 NME8Q8N427 588 aa15.75■□□□□ 0.11
SHKBP1-208ENST00000595726 AUTS2Q8WXX7 1259 aa15.75■□□□□ 0.11
SHKBP1-208ENST00000595726 RTP3Q9BQQ7 232 aa15.75■□□□□ 0.11
SHKBP1-208ENST00000595726 CYP26B1Q9NR63 512 aa15.75■□□□□ 0.11
SHKBP1-208ENST00000595726 TMEM161AQ9NX61 479 aa15.75■□□□□ 0.11
SHKBP1-208ENST00000595726 DLL3Q9NYJ7 618 aa15.75■□□□□ 0.11
SHKBP1-208ENST00000595726 SPG21Q9NZD8 308 aa15.75■□□□□ 0.11
SHKBP1-208ENST00000595726 GPR179Q6PRD1 2367 aa15.75■□□□□ 0.11
SHKBP1-208ENST00000595726 NT5C1B-RDH14C9J2C7 533 aa15.74■□□□□ 0.11
SHKBP1-208ENST00000595726 NARSO43776 548 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-208ENST00000595726 GSPT1P15170 499 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-208ENST00000595726 TDGQ13569 410 aa15.74■□□□□ 0.11
SHKBP1-208ENST00000595726 MTMR1Q13613 665 aa15.74■□□□□ 0.11
SHKBP1-208ENST00000595726 IMMTQ16891 758 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-208ENST00000595726 KIAA1841Q6NSI8 718 aa15.74■□□□□ 0.11
SHKBP1-208ENST00000595726 KIAA0319LQ8IZA0 1049 aa15.74■□□□□ 0.11
SHKBP1-208ENST00000595726 CUL5Q93034 780 aa15.74■□□□□ 0.11
SHKBP1-208ENST00000595726 TMEM117Q9H0C3 514 aa15.74■□□□□ 0.11
SHKBP1-208ENST00000595726 AZI2Q9H6S1 392 aa15.74■□□□□ 0.11
SHKBP1-208ENST00000595726 USTQ9Y2C2 406 aa15.74■□□□□ 0.11
SHKBP1-208ENST00000595726 UBIAD1Q9Y5Z9 338 aa15.74■□□□□ 0.11
SHKBP1-208ENST00000595726 GPR182O15218 404 aa15.73■□□□□ 0.11
SHKBP1-208ENST00000595726 STAT5BP51692 787 aa15.73■□□□□ 0.11
SHKBP1-208ENST00000595726 RSPO4Q2I0M5 234 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-208ENST00000595726 KIZQ2M2Z5 673 aa15.73■□□□□ 0.11
SHKBP1-208ENST00000595726 TTC22Q5TAA0 569 aa15.73■□□□□ 0.11
SHKBP1-208ENST00000595726 FAM228AQ86W67 206 aa15.73■□□□□ 0.11
SHKBP1-208ENST00000595726 CDHR1Q96JP9 859 aa15.73■□□□□ 0.11
SHKBP1-208ENST00000595726 SEMA4AQ9H3S1 761 aa15.73■□□□□ 0.11
SHKBP1-208ENST00000595726 CNNM2Q9H8M5 875 aa15.73■□□□□ 0.11
SHKBP1-208ENST00000595726 KCNK12Q9HB15 430 aa15.73■□□□□ 0.11
SHKBP1-208ENST00000595726 KRBA1A5PL33 1030 aa15.72■□□□□ 0.11
SHKBP1-208ENST00000595726 PIK3CDO00329 1044 aa15.72■□□□□ 0.11
SHKBP1-208ENST00000595726 CFHP08603 1231 aa15.72■□□□□ 0.11
SHKBP1-208ENST00000595726 PPM1AP35813 382 aa15.72■□□□□ 0.11
SHKBP1-208ENST00000595726 ACTR2P61160 394 aa15.72■□□□□ 0.11
SHKBP1-208ENST00000595726 DSC3Q14574 896 aa15.72■□□□□ 0.11
SHKBP1-208ENST00000595726 SLC39A11Q8N1S5 342 aa15.72■□□□□ 0.11
SHKBP1-208ENST00000595726 RNF169Q8NCN4 708 aa15.72■□□□□ 0.11
SHKBP1-208ENST00000595726 OSMRQ99650 979 aa15.72■□□□□ 0.11
SHKBP1-208ENST00000595726 ELAC1Q9H777 363 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-208ENST00000595726 JPH1Q9HDC5 661 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-208ENST00000595726 DIAPH3Q9NSV4 1193 aa15.72■□□□□ 0.11
SHKBP1-208ENST00000595726 RNF216Q9NWF9 866 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-208ENST00000595726 SLC9A2Q9UBY0 812 aa15.72■□□□□ 0.11
SHKBP1-208ENST00000595726 DUSP12Q9UNI6 340 aa15.72■□□□□ 0.11
SHKBP1-208ENST00000595726 HIP1O00291 1037 aa15.71■□□□□ 0.11
SHKBP1-208ENST00000595726 METAP2P50579 478 aaKnown RBP eCLIP15.71■□□□□ 0.11
SHKBP1-208ENST00000595726 TROAPQ12815 778 aa15.71■□□□□ 0.11
SHKBP1-208ENST00000595726 UBE2SQ16763 222 aa15.71■□□□□ 0.11
SHKBP1-208ENST00000595726 SPECC1Q5M775 1068 aa15.71■□□□□ 0.11
SHKBP1-208ENST00000595726 PLPPR4Q7Z2D5 763 aa15.71■□□□□ 0.11
SHKBP1-208ENST00000595726 SLC22A17Q8WUG5 538 aa15.71■□□□□ 0.11
SHKBP1-208ENST00000595726 RSAD2Q8WXG1 361 aa15.71■□□□□ 0.11
SHKBP1-208ENST00000595726 RUBCNQ92622 972 aa15.71■□□□□ 0.11
SHKBP1-208ENST00000595726 ACSF2Q96CM8 615 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-208ENST00000595726 JADE2Q9NQC1 790 aa15.71■□□□□ 0.11
SHKBP1-208ENST00000595726 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-208ENST00000595726 IFIT3O14879 490 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-208ENST00000595726 VTNP04004 478 aa15.7■□□□□ 0.1
SHKBP1-208ENST00000595726 DCNP07585 359 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-208ENST00000595726 CLLU1OSQ5K130 101 aa15.7■□□□□ 0.1
SHKBP1-208ENST00000595726 ABI1Q8IZP0 508 aa15.7■□□□□ 0.1
SHKBP1-208ENST00000595726 VPS52Q8N1B4 723 aa15.7■□□□□ 0.1
SHKBP1-208ENST00000595726 LRRC43Q8N309 656 aa15.7■□□□□ 0.1
SHKBP1-208ENST00000595726 TMEM87AQ8NBN3 555 aa15.7■□□□□ 0.1
SHKBP1-208ENST00000595726 TNPO1Q92973 898 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-208ENST00000595726 DSCC1Q9BVC3 393 aa15.7■□□□□ 0.1
SHKBP1-208ENST00000595726 MAP1BP46821 2468 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-208ENST00000595726 SP9P0CG40 484 aa15.69■□□□□ 0.1
SHKBP1-208ENST00000595726 CRYBB1P53674 252 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-208ENST00000595726 BCAR1P56945 870 aa15.69■□□□□ 0.1
SHKBP1-208ENST00000595726 ODR4Q5SWX8 454 aa15.69■□□□□ 0.1
SHKBP1-208ENST00000595726 OTOP3Q7RTS5 596 aa15.69■□□□□ 0.1
SHKBP1-208ENST00000595726 CABP7Q86V35 215 aa15.69■□□□□ 0.1
SHKBP1-208ENST00000595726 TMEM173Q86WV6 379 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-208ENST00000595726 ECHDC2Q86YB7 292 aa15.69■□□□□ 0.1
SHKBP1-208ENST00000595726 IL25Q9H293 177 aa15.69■□□□□ 0.1
SHKBP1-208ENST00000595726 PSTPIP2Q9H939 334 aa15.69■□□□□ 0.1
SHKBP1-208ENST00000595726 KCNH7Q9NS40 1196 aa15.69■□□□□ 0.1
SHKBP1-208ENST00000595726 DZANK1Q9NVP4 752 aa15.69■□□□□ 0.1
SHKBP1-208ENST00000595726 CA14Q9ULX7 337 aa15.69■□□□□ 0.1
SHKBP1-208ENST00000595726 N4BP1O75113 896 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-208ENST00000595726 GPR32O75388 356 aa15.68■□□□□ 0.1
SHKBP1-208ENST00000595726 RFX1P22670 979 aa15.68■□□□□ 0.1
SHKBP1-208ENST00000595726 CCDC149Q6ZUS6 474 aa15.68■□□□□ 0.1
SHKBP1-208ENST00000595726 GPR149Q86SP6 731 aa15.68■□□□□ 0.1
SHKBP1-208ENST00000595726 HELQQ8TDG4 1101 aa15.68■□□□□ 0.1
SHKBP1-208ENST00000595726 RRP36Q96EU6 259 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-208ENST00000595726 ZNF668Q96K58 619 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-208ENST00000595726 PCDHA6Q9UN73 950 aa15.68■□□□□ 0.1
SHKBP1-208ENST00000595726 PCDHA8Q9Y5H6 950 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms